RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W LEM3P42838 414 aa1.67□□□□□ -2.14
PRP16YKR086W NUT1P53114 1132 aa1.67□□□□□ -2.14
PRP16YKR086W YNL011CP53980 444 aa1.67□□□□□ -2.14
PRP16YKR086W ALO1P54783 526 aaKnown RBP1.67□□□□□ -2.14
PRP16YKR086W SEN54Q02825 467 aaPredicted RBP1.67□□□□□ -2.14
PRP16YKR086W NOG1Q02892 647 aaKnown RBP1.67□□□□□ -2.14
PRP16YKR086W TY2B-LR1P0C2J3 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-FP0CX63 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-GR2P0CX64 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-CP25384 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-DR2Q03494 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY1B-DR1Q03855 1755 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-DR3Q07791 1770 aaKnown RBP1.67□□□□□ -2.14
PRP16YKR086W TY2B-OR1Q12113 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-DR1Q12472 1770 aa1.67□□□□□ -2.14
PRP16YKR086W TY2B-OR2Q12501 1770 aa1.67□□□□□ -2.14
PRP16YKR086W ECM5Q03214 1411 aa1.67□□□□□ -2.14
PRP16YKR086W PUB1P32588 453 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
PRP16YKR086W ORC3P54790 616 aa1.66□□□□□ -2.14
PRP16YKR086W ELG1Q12050 791 aa1.66□□□□□ -2.14
PRP16YKR086W GDB1Q06625 1536 aa1.66□□□□□ -2.14
PRP16YKR086W TAF2P23255 1407 aa1.66□□□□□ -2.14
PRP16YKR086W RAD27P26793 382 aa1.66□□□□□ -2.14
PRP16YKR086W ELM1P32801 640 aa1.66□□□□□ -2.14
PRP16YKR086W THI80P35202 319 aa1.66□□□□□ -2.14
PRP16YKR086W YKL077WP36081 392 aa1.66□□□□□ -2.14
PRP16YKR086W OYE3P41816 400 aaPredicted RBP1.66□□□□□ -2.14
PRP16YKR086W SAM37P50110 327 aa1.66□□□□□ -2.14
PRP16YKR086W UFD2P54860 961 aa1.66□□□□□ -2.14
PRP16YKR086W DAL4Q04895 635 aa1.66□□□□□ -2.14
PRP16YKR086W RRP15Q06511 250 aaPredicted RBP1.66□□□□□ -2.14
PRP16YKR086W MCM5P29496 775 aaKnown RBP1.66□□□□□ -2.14
PRP16YKR086W LRG1P35688 1017 aa1.66□□□□□ -2.14
PRP16YKR086W SSF1P38789 453 aaPredicted RBP1.66□□□□□ -2.14
PRP16YKR086W AKR1P39010 764 aa1.66□□□□□ -2.14
PRP16YKR086W ALT1P52893 592 aa1.66□□□□□ -2.14
PRP16YKR086W KIP3P53086 805 aaKnown RBP1.66□□□□□ -2.14
PRP16YKR086W SNT2P53127 1403 aa1.66□□□□□ -2.14
PRP16YKR086W TRM732Q03496 1420 aa1.66□□□□□ -2.14
PRP16YKR086W KAR2P16474 682 aaKnown RBP1.65□□□□□ -2.14
PRP16YKR086W MCM2P29469 868 aa1.65□□□□□ -2.14
PRP16YKR086W IPL1P38991 367 aa1.65□□□□□ -2.14
PRP16YKR086W GCV1P48015 400 aa1.65□□□□□ -2.14
PRP16YKR086W GNP1P48813 663 aa1.65□□□□□ -2.14
PRP16YKR086W FOL2P51601 243 aaKnown RBP1.65□□□□□ -2.14
PRP16YKR086W YAF9P53930 226 aa1.65□□□□□ -2.14
PRP16YKR086W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14not detected
PRP16YKR086W SPO71Q03868 1245 aa1.65□□□□□ -2.14
PRP16YKR086W BRE4Q07660 1125 aa1.65□□□□□ -2.14
PRP16YKR086W NFS1P25374 497 aa1.65□□□□□ -2.15
PRP16YKR086W RPT1P33299 467 aaKnown RBP1.65□□□□□ -2.15
PRP16YKR086W SPO74P45819 413 aa1.65□□□□□ -2.15
PRP16YKR086W BSC2Q05611 235 aa1.65□□□□□ -2.15
PRP16YKR086W LPX1Q12405 387 aaKnown RBP1.65□□□□□ -2.15
PRP16YKR086W SCC2Q04002 1493 aa1.65□□□□□ -2.15
PRP16YKR086W TY2B-BQ12491 1770 aa1.65□□□□□ -2.15
PRP16YKR086W TY3B-GQ99315 1547 aa1.65□□□□□ -2.15
PRP16YKR086W GCD6P32501 712 aaKnown RBP1.64□□□□□ -2.15
PRP16YKR086W NEM1P38757 446 aa1.64□□□□□ -2.15
PRP16YKR086W PEX7P39108 375 aa1.64□□□□□ -2.15
PRP16YKR086W DAK2P43550 591 aa1.64□□□□□ -2.15
PRP16YKR086W SVF1Q05515 481 aa1.64□□□□□ -2.15
PRP16YKR086W NUP170P38181 1502 aa1.64□□□□□ -2.15
PRP16YKR086W SAM35P14693 329 aa1.64□□□□□ -2.15
PRP16YKR086W HXT13P39924 564 aa1.64□□□□□ -2.15
PRP16YKR086W FET4P40988 552 aa1.64□□□□□ -2.15
PRP16YKR086W YGR130CP53278 816 aa1.64□□□□□ -2.15
PRP16YKR086W HXT17P53631 564 aa1.64□□□□□ -2.15
PRP16YKR086W HXT15P54854 567 aa1.64□□□□□ -2.15
PRP16YKR086W CDA2Q06703 312 aa1.64□□□□□ -2.15
PRP16YKR086W INP54Q08227 384 aaKnown RBP1.64□□□□□ -2.15
PRP16YKR086W HXK1P04806 485 aaKnown RBP1.64□□□□□ -2.15
PRP16YKR086W RSC6P25632 483 aa1.64□□□□□ -2.15
PRP16YKR086W MAE1P36013 669 aaKnown RBP1.64□□□□□ -2.15
PRP16YKR086W KAE1P36132 386 aa1.64□□□□□ -2.15
PRP16YKR086W MCM7P38132 845 aa1.64□□□□□ -2.15
PRP16YKR086W SHU2P38957 223 aa1.64□□□□□ -2.15
PRP16YKR086W PIC2P40035 300 aa1.64□□□□□ -2.15
PRP16YKR086W MEC3Q02574 474 aa1.64□□□□□ -2.15
PRP16YKR086W MRL1Q06815 381 aa1.64□□□□□ -2.15
PRP16YKR086W PDR10P51533 1564 aa1.64□□□□□ -2.15
PRP16YKR086W YRF1-1P0CX20 1796 aa1.63□□□□□ -2.15
PRP16YKR086W YRF1-5P0CX21 1796 aa1.63□□□□□ -2.15
PRP16YKR086W YRF1-8P0CX22 1796 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-JR2P47100 1755 aaKnown RBP1.63□□□□□ -2.15
PRP16YKR086W TY1B-ER2Q03619 1755 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-MR1Q04214 1755 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-MR2Q04670 1755 aaKnown RBP1.63□□□□□ -2.15
PRP16YKR086W TY1B-LR1Q12088 1755 aaKnown RBP1.63□□□□□ -2.15
PRP16YKR086W TY1B-NL1Q12112 1755 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-GR1Q12141 1755 aa1.63□□□□□ -2.15
PRP16YKR086W TY1B-BLQ12490 1755 aa1.63□□□□□ -2.15
PRP16YKR086W AFG2P32794 780 aa1.63□□□□□ -2.15
PRP16YKR086W GPT2P36148 743 aa1.63□□□□□ -2.15
PRP16YKR086W PPX1P38698 397 aa1.63□□□□□ -2.15
PRP16YKR086W MSH4P40965 878 aaPredicted RBP1.63□□□□□ -2.15
PRP16YKR086W MTR4P47047 1073 aaKnown RBP1.63□□□□□ -2.15
PRP16YKR086W MED7Q08278 222 aa1.63□□□□□ -2.15
PRP16YKR086W YDL177CQ12257 170 aa1.63□□□□□ -2.15
PRP16YKR086W CHS2P14180 963 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms