RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C MSC6Q08818 692 aaKnown RBP11.64□□□□□ -0.55
YSR3YKR053C PHR1P05066 565 aaKnown RBP RIP-Chip data11.63□□□□□ -0.55not detected
YSR3YKR053C TRL1P09880 827 aaKnown RBP11.63□□□□□ -0.55
YSR3YKR053C YUR1P26725 428 aa11.63□□□□□ -0.55
YSR3YKR053C FBP26P32604 452 aa11.63□□□□□ -0.55
YSR3YKR053C TIM23P32897 222 aa11.63□□□□□ -0.55
YSR3YKR053C DBP7P36120 742 aaKnown RBP11.63□□□□□ -0.55
YSR3YKR053C UIP5P36137 443 aa11.63□□□□□ -0.55
YSR3YKR053C YDR341CQ05506 607 aaKnown RBP11.63□□□□□ -0.55
YSR3YKR053C PWP2P25635 923 aaKnown RBP11.62□□□□□ -0.55
YSR3YKR053C UGA4P32837 571 aa11.62□□□□□ -0.55
YSR3YKR053C TFC4P33339 1025 aa11.62□□□□□ -0.55
YSR3YKR053C NDT80P38830 627 aa11.62□□□□□ -0.55
YSR3YKR053C AKR1P39010 764 aa11.62□□□□□ -0.55
YSR3YKR053C KRI1P42846 591 aaKnown RBP11.62□□□□□ -0.55
YSR3YKR053C FAP1P53971 965 aa11.62□□□□□ -0.55
YSR3YKR053C CIT1P00890 479 aa11.61□□□□□ -0.55
YSR3YKR053C DBP1P24784 617 aaKnown RBP11.61□□□□□ -0.55
YSR3YKR053C OPY1P38271 328 aa11.61□□□□□ -0.55
YSR3YKR053C VID28P40547 921 aa11.61□□□□□ -0.55
YSR3YKR053C FMP30Q02883 468 aa11.61□□□□□ -0.55
YSR3YKR053C YMR321CQ04898 105 aa11.61□□□□□ -0.55
YSR3YKR053C RKM4Q12504 494 aa11.61□□□□□ -0.55
YSR3YKR053C MATALPHA2P0CY08 210 aa11.6□□□□□ -0.55
YSR3YKR053C HMLALPHA2P0CY09 210 aa11.6□□□□□ -0.55
YSR3YKR053C REG2P38232 338 aa11.6□□□□□ -0.55
YSR3YKR053C PAN5P38787 379 aa11.6□□□□□ -0.55
YSR3YKR053C NOC2P39744 710 aaKnown RBP11.6□□□□□ -0.55
YSR3YKR053C YFL040WP43562 540 aa11.6□□□□□ -0.55
YSR3YKR053C PTA1Q01329 785 aaPredicted RBP11.6□□□□□ -0.55
YSR3YKR053C YLR326WQ06170 240 aaKnown RBP11.6□□□□□ -0.55
YSR3YKR053C MAM3Q12296 706 aa11.6□□□□□ -0.55
YSR3YKR053C TRM11Q12463 433 aa11.6□□□□□ -0.55
YSR3YKR053C PDC1P06169 563 aaKnown RBP11.59□□□□□ -0.55
YSR3YKR053C POX1P13711 748 aa11.59□□□□□ -0.55
YSR3YKR053C BMH2P34730 273 aaKnown RBP11.59□□□□□ -0.55
YSR3YKR053C CCT3P39077 534 aaKnown RBP11.59□□□□□ -0.55
YSR3YKR053C SKP2P42843 763 aa11.59□□□□□ -0.55
YSR3YKR053C ASE1P50275 885 aa11.59□□□□□ -0.55
YSR3YKR053C YKE2P52553 114 aa11.59□□□□□ -0.55
YSR3YKR053C YGL039WP53183 348 aaKnown RBP11.59□□□□□ -0.55
YSR3YKR053C UBP10P53874 792 aaPredicted RBP11.59□□□□□ -0.55
YSR3YKR053C YPL034WQ03083 165 aa11.59□□□□□ -0.55
YSR3YKR053C WHI3P34761 661 aaKnown RBP11.58□□□□□ -0.56
YSR3YKR053C FIR1P40020 876 aa11.58□□□□□ -0.56
YSR3YKR053C CLA4P48562 842 aa11.58□□□□□ -0.56
YSR3YKR053C ARP5P53946 755 aa11.58□□□□□ -0.56
YSR3YKR053C MET6P05694 767 aaKnown RBP11.57□□□□□ -0.56
YSR3YKR053C GPT2P36148 743 aa11.57□□□□□ -0.56
YSR3YKR053C RXT2P38255 430 aa11.57□□□□□ -0.56
YSR3YKR053C SCS3P53012 380 aa11.57□□□□□ -0.56
YSR3YKR053C GDE1Q02979 1223 aa11.57□□□□□ -0.56
YSR3YKR053C MAK11P20484 414 aaKnown RBP11.56□□□□□ -0.56
YSR3YKR053C SES1P07284 462 aaKnown RBP11.55□□□□□ -0.56
YSR3YKR053C RNR2P09938 399 aaKnown RBP11.55□□□□□ -0.56
YSR3YKR053C STI1P15705 589 aaKnown RBP RIP-Chip data11.55□□□□□ -0.56not detected
YSR3YKR053C SWI4P25302 1093 aaKnown RBP11.55□□□□□ -0.56
YSR3YKR053C SUL1P38359 859 aa11.55□□□□□ -0.56
YSR3YKR053C PCI8P40512 444 aa11.55□□□□□ -0.56
YSR3YKR053C EPL1P43572 832 aa11.55□□□□□ -0.56
YSR3YKR053C CTR1P49573 406 aa11.55□□□□□ -0.56
YSR3YKR053C YDR461C-AQ2V2P7 80 aa11.55□□□□□ -0.56
YSR3YKR053C RPC31P17890 251 aa11.54□□□□□ -0.56
YSR3YKR053C YGL138CP53122 345 aa11.54□□□□□ -0.56
YSR3YKR053C DAK1P54838 584 aaKnown RBP11.54□□□□□ -0.56
YSR3YKR053C SRO9P25567 434 aaKnown RBP11.53□□□□□ -0.56
YSR3YKR053C SAS3P34218 831 aa11.53□□□□□ -0.56
YSR3YKR053C OYE2Q03558 400 aaKnown RBP11.53□□□□□ -0.56
YSR3YKR053C YLR407WQ06070 228 aa11.53□□□□□ -0.56
YSR3YKR053C TSR3Q12094 313 aaKnown RBP11.53□□□□□ -0.56
YSR3YKR053C ARP6Q12509 438 aa11.53□□□□□ -0.56
YSR3YKR053C RTP1Q12751 981 aa11.53□□□□□ -0.56
YSR3YKR053C HEM1P09950 548 aaPredicted RBP11.52□□□□□ -0.57
YSR3YKR053C SNA3P14359 133 aa11.52□□□□□ -0.57
YSR3YKR053C HCA4P20448 770 aaKnown RBP11.52□□□□□ -0.57
YSR3YKR053C CBP3P21560 335 aa11.52□□□□□ -0.57
YSR3YKR053C CLB5P30283 435 aa11.52□□□□□ -0.57
YSR3YKR053C BNI5P53890 448 aaKnown RBP11.52□□□□□ -0.57
YSR3YKR053C WHI4Q07655 649 aaKnown RBP11.52□□□□□ -0.57
YSR3YKR053C OXR1Q08952 273 aa11.52□□□□□ -0.57
YSR3YKR053C TAO3P40468 2376 aa11.52□□□□□ -0.57
YSR3YKR053C KTR2P33550 425 aa11.51□□□□□ -0.57
YSR3YKR053C FLR1P38124 548 aa11.51□□□□□ -0.57
YSR3YKR053C YHL017WP38745 532 aa11.51□□□□□ -0.57
YSR3YKR053C RPN10P38886 268 aaKnown RBP11.51□□□□□ -0.57
YSR3YKR053C HMF1P40037 129 aaKnown RBP11.51□□□□□ -0.57
YSR3YKR053C UBP15P50101 1230 aa11.51□□□□□ -0.57
YSR3YKR053C CEX1Q12453 761 aa11.51□□□□□ -0.57
YSR3YKR053C ASF1P32447 279 aa11.5□□□□□ -0.57
YSR3YKR053C RPS7BP48164 190 aaKnown RBP11.5□□□□□ -0.57
YSR3YKR053C HUL5P53119 910 aa11.5□□□□□ -0.57
YSR3YKR053C RET3P53600 189 aa11.5□□□□□ -0.57
YSR3YKR053C NAF1P53919 492 aaKnown RBP11.5□□□□□ -0.57
YSR3YKR053C ORC4P54791 529 aa11.5□□□□□ -0.57
YSR3YKR053C EAR1Q03212 550 aa11.5□□□□□ -0.57
YSR3YKR053C YML020WQ03722 664 aa11.5□□□□□ -0.57
YSR3YKR053C GIS4Q04233 774 aa11.5□□□□□ -0.57
YSR3YKR053C PSK2Q08217 1101 aa11.5□□□□□ -0.57
YSR3YKR053C ISW1P38144 1129 aa11.49□□□□□ -0.57
YSR3YKR053C BUD6P41697 788 aa11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms