RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C RCM1P53972 490 aa5.44□□□□□ -1.54
YPT52YKR014C ESF1Q06344 628 aaKnown RBP5.44□□□□□ -1.54
YPT52YKR014C RRP15Q06511 250 aaPredicted RBP5.44□□□□□ -1.54
YPT52YKR014C TRP3P00937 484 aa5.43□□□□□ -1.54
YPT52YKR014C MCM2P29469 868 aa5.43□□□□□ -1.54
YPT52YKR014C WHI3P34761 661 aaKnown RBP5.43□□□□□ -1.54
YPT52YKR014C ALT1P52893 592 aa5.43□□□□□ -1.54
YPT52YKR014C YNR063WP53749 607 aa5.43□□□□□ -1.54
YPT52YKR014C RMD1Q03441 430 aa5.43□□□□□ -1.54
YPT52YKR014C OYE2Q03558 400 aaKnown RBP5.43□□□□□ -1.54
YPT52YKR014C RKM2Q03942 479 aa5.43□□□□□ -1.54
YPT52YKR014C SEC23P15303 768 aaKnown RBP5.42□□□□□ -1.54
YPT52YKR014C LIP5P32875 414 aa5.42□□□□□ -1.54
YPT52YKR014C TOS1P38288 455 aa5.42□□□□□ -1.54
YPT52YKR014C EST2Q06163 884 aa5.42□□□□□ -1.54
YPT52YKR014C RET1P22276 1149 aaKnown RBP5.41□□□□□ -1.54
YPT52YKR014C RDH54P38086 958 aa5.41□□□□□ -1.54
YPT52YKR014C PIC2P40035 300 aa5.41□□□□□ -1.54
YPT52YKR014C VPS53P47061 822 aa5.41□□□□□ -1.54
YPT52YKR014C SPR28Q04921 423 aa5.41□□□□□ -1.54
YPT52YKR014C HRK1Q08732 759 aaKnown RBP5.41□□□□□ -1.54
YPT52YKR014C YKR073CP36153 106 aa5.4□□□□□ -1.54
YPT52YKR014C INP52P50942 1183 aa5.4□□□□□ -1.54
YPT52YKR014C YLR257WQ06146 321 aaKnown RBP5.4□□□□□ -1.54
YPT52YKR014C NAP1P25293 417 aaKnown RBP5.39□□□□□ -1.55
YPT52YKR014C RAD27P26793 382 aa5.39□□□□□ -1.55
YPT52YKR014C PUB1P32588 453 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55 RIP-Chip
YPT52YKR014C FYV10P40492 516 aa5.39□□□□□ -1.55
YPT52YKR014C TPP1Q03796 238 aa5.39□□□□□ -1.55
YPT52YKR014C MRL1Q06815 381 aa5.39□□□□□ -1.55
YPT52YKR014C DED1P06634 604 aaKnown RBP5.38□□□□□ -1.55
YPT52YKR014C ENT3P47160 408 aa5.38□□□□□ -1.55
YPT52YKR014C RSA3Q05942 220 aaKnown RBP5.38□□□□□ -1.55
YPT52YKR014C BRE4Q07660 1125 aa5.38□□□□□ -1.55
YPT52YKR014C PUS7Q08647 676 aaKnown RBP5.38□□□□□ -1.55
YPT52YKR014C QNS1P38795 714 aaKnown RBP5.37□□□□□ -1.55
YPT52YKR014C HDA2Q06629 674 aa5.37□□□□□ -1.55
YPT52YKR014C TRE1Q08919 783 aa5.37□□□□□ -1.55
YPT52YKR014C YVC1Q12324 675 aa5.37□□□□□ -1.55
YPT52YKR014C HEM13P11353 328 aaKnown RBP5.36□□□□□ -1.55
YPT52YKR014C ADP1P25371 1049 aa5.36□□□□□ -1.55
YPT52YKR014C PET112P33893 541 aa5.36□□□□□ -1.55
YPT52YKR014C SIW14P53965 281 aa5.36□□□□□ -1.55
YPT52YKR014C EAR1Q03212 550 aa5.36□□□□□ -1.55
YPT52YKR014C PTC5Q12511 572 aa5.36□□□□□ -1.55
YPT52YKR014C GCD1P09032 578 aaPredicted RBP5.35□□□□□ -1.55
YPT52YKR014C OYE3P41816 400 aaPredicted RBP5.35□□□□□ -1.55
YPT52YKR014C SNU71P53207 620 aaKnown RBP5.35□□□□□ -1.55
YPT52YKR014C MAG2Q06436 670 aaKnown RBP5.35□□□□□ -1.55
YPT52YKR014C TMA46Q12000 345 aaKnown RBP5.35□□□□□ -1.55
YPT52YKR014C GCR1P07261 785 aa5.34□□□□□ -1.55
YPT52YKR014C YHL012WP38709 493 aa5.34□□□□□ -1.55
YPT52YKR014C ROD1Q02805 837 aa5.34□□□□□ -1.55
YPT52YKR014C SVF1Q05515 481 aa5.34□□□□□ -1.55
YPT52YKR014C RTT10Q08924 1013 aa5.34□□□□□ -1.55
YPT52YKR014C PRO1P32264 428 aa5.33□□□□□ -1.56
YPT52YKR014C MNR2P35724 969 aa5.33□□□□□ -1.56
YPT52YKR014C ALG3P38179 458 aa5.33□□□□□ -1.56
YPT52YKR014C NMD3P38861 518 aaKnown RBP5.33□□□□□ -1.56
YPT52YKR014C SDH1Q00711 640 aa5.33□□□□□ -1.56
YPT52YKR014C SYP1P25623 870 aaKnown RBP5.32□□□□□ -1.56
YPT52YKR014C MKK2P32491 506 aa5.32□□□□□ -1.56
YPT52YKR014C MDL2P33311 773 aa5.32□□□□□ -1.56
YPT52YKR014C CTH1P47976 325 aa5.32□□□□□ -1.56
YPT52YKR014C SSY1Q03770 852 aa5.32□□□□□ -1.56
YPT52YKR014C NBA1Q08229 501 aaKnown RBP5.32□□□□□ -1.56
YPT52YKR014C YPL260WQ08977 551 aa5.32□□□□□ -1.56
YPT52YKR014C COQ4O13525 335 aa5.31□□□□□ -1.56
YPT52YKR014C CLN2P20438 545 aa5.31□□□□□ -1.56
YPT52YKR014C KIP1P28742 1111 aa5.31□□□□□ -1.56
YPT52YKR014C PTC7P38797 343 aa5.31□□□□□ -1.56
YPT52YKR014C YJL045WP47052 634 aa5.31□□□□□ -1.56
YPT52YKR014C FOL2P51601 243 aaKnown RBP5.31□□□□□ -1.56
YPT52YKR014C SRO9P25567 434 aaKnown RBP5.3□□□□□ -1.56
YPT52YKR014C YSC84P32793 468 aa5.3□□□□□ -1.56
YPT52YKR014C AFG2P32794 780 aa5.3□□□□□ -1.56
YPT52YKR014C CCZ1P38273 704 aa5.3□□□□□ -1.56
YPT52YKR014C PEX7P39108 375 aa5.3□□□□□ -1.56
YPT52YKR014C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
YPT52YKR014C RAT1Q02792 1006 aaKnown RBP5.3□□□□□ -1.56
YPT52YKR014C RGD1P38339 666 aa5.29□□□□□ -1.56
YPT52YKR014C GTS1P40956 396 aa5.29□□□□□ -1.56
YPT52YKR014C MAD1P40957 749 aa5.29□□□□□ -1.56
YPT52YKR014C CNN1P43618 361 aa5.29□□□□□ -1.56
YPT52YKR014C HOS3Q02959 697 aaKnown RBP5.29□□□□□ -1.56
YPT52YKR014C SPO21Q12411 609 aa5.29□□□□□ -1.56
YPT52YKR014C CDC34P14682 295 aa5.28□□□□□ -1.56
YPT52YKR014C DBP5P20449 482 aaKnown RBP5.28□□□□□ -1.56
YPT52YKR014C PUF4P25339 888 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
YPT52YKR014C HSP78P33416 811 aa5.28□□□□□ -1.56
YPT52YKR014C HXT13P39924 564 aa5.28□□□□□ -1.56
YPT52YKR014C KRI1P42846 591 aaKnown RBP5.28□□□□□ -1.56
YPT52YKR014C GNP1P48813 663 aa5.28□□□□□ -1.56
YPT52YKR014C TNA1P53322 534 aa5.28□□□□□ -1.56
YPT52YKR014C HXT17P53631 564 aa5.28□□□□□ -1.56
YPT52YKR014C HXT15P54854 567 aa5.28□□□□□ -1.56
YPT52YKR014C RSB1Q08417 382 aa5.28□□□□□ -1.56
YPT52YKR014C SAM35P14693 329 aa5.27□□□□□ -1.57
YPT52YKR014C RER2P35196 286 aa5.27□□□□□ -1.57
YPT52YKR014C POL12P38121 705 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 1644.7 ms