RNA–Protein interactions for RNA: YKL180W

RPL17A, Transcript of Ribosomal 60S subunit protein L17A, yeast

Gene RPL17A, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL17A	YKL180W	NFS1	P25374	497 aa		4.97	□□□□□ -1.61
RPL17A	YKL180W	WHI3	P34761	661 aa	Known RBP	4.97	□□□□□ -1.61
RPL17A	YKL180W	ADD66	P36040	267 aa		4.97	□□□□□ -1.61
RPL17A	YKL180W	RDH54	P38086	958 aa		4.97	□□□□□ -1.61
RPL17A	YKL180W	HSE1	P38753	452 aa		4.97	□□□□□ -1.61
RPL17A	YKL180W	ALO1	P54783	526 aa	Known RBP	4.97	□□□□□ -1.61
RPL17A	YKL180W	EST2	Q06163	884 aa		4.97	□□□□□ -1.61
RPL17A	YKL180W	SMY2	P32909	740 aa	Known RBP	4.96	□□□□□ -1.62
RPL17A	YKL180W	RMD1	Q03441	430 aa		4.96	□□□□□ -1.62
RPL17A	YKL180W	MRL1	Q06815	381 aa		4.96	□□□□□ -1.62
RPL17A	YKL180W	MED7	Q08278	222 aa		4.96	□□□□□ -1.62
RPL17A	YKL180W	TRP3	P00937	484 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	TAF13	P11747	167 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	RET1	P22276	1149 aa	Known RBP	4.95	□□□□□ -1.62
RPL17A	YKL180W	CIT3	P43635	486 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	ALT1	P52893	592 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	SNU71	P53207	620 aa	Known RBP	4.95	□□□□□ -1.62
RPL17A	YKL180W	HDA2	Q06629	674 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	NSI1	Q12457	570 aa		4.95	□□□□□ -1.62
RPL17A	YKL180W	CYC7	P00045	113 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	GCR1	P07261	785 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	PET112	P33893	541 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	RCM1	P53972	490 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	RKM2	Q03942	479 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	YOR059C	Q08448	450 aa	Known RBP	4.94	□□□□□ -1.62
RPL17A	YKL180W	SSN2	P38931	1420 aa		4.94	□□□□□ -1.62
RPL17A	YKL180W	RAD27	P26793	382 aa		4.93	□□□□□ -1.62
RPL17A	YKL180W	OMA1	P36163	345 aa		4.93	□□□□□ -1.62
RPL17A	YKL180W	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
RPL17A	YKL180W	ROD1	Q02805	837 aa		4.93	□□□□□ -1.62
RPL17A	YKL180W	EAR1	Q03212	550 aa		4.93	□□□□□ -1.62
RPL17A	YKL180W	TPP1	Q03796	238 aa		4.93	□□□□□ -1.62
RPL17A	YKL180W	YLR257W	Q06146	321 aa	Known RBP	4.93	□□□□□ -1.62
RPL17A	YKL180W	MAC1	P35192	417 aa		4.92	□□□□□ -1.62
RPL17A	YKL180W	YKR073C	P36153	106 aa		4.92	□□□□□ -1.62
RPL17A	YKL180W	VPS53	P47061	822 aa		4.92	□□□□□ -1.62
RPL17A	YKL180W	RSA3	Q05942	220 aa	Known RBP	4.92	□□□□□ -1.62
RPL17A	YKL180W	PTC5	Q12511	572 aa		4.92	□□□□□ -1.62
RPL17A	YKL180W	TOS1	P38288	455 aa		4.91	□□□□□ -1.62
RPL17A	YKL180W	QNS1	P38795	714 aa	Known RBP	4.91	□□□□□ -1.62
RPL17A	YKL180W	SIW14	P53965	281 aa		4.91	□□□□□ -1.62
RPL17A	YKL180W	PUS7	Q08647	676 aa	Known RBP	4.91	□□□□□ -1.62
RPL17A	YKL180W	HRK1	Q08732	759 aa	Known RBP	4.91	□□□□□ -1.62
RPL17A	YKL180W	RTT10	Q08924	1013 aa		4.91	□□□□□ -1.62
RPL17A	YKL180W	LIP5	P32875	414 aa		4.9	□□□□□ -1.63
RPL17A	YKL180W	SVF1	Q05515	481 aa		4.9	□□□□□ -1.63
RPL17A	YKL180W	JIP5	Q06214	492 aa	Predicted RBP	4.9	□□□□□ -1.63
RPL17A	YKL180W	YVC1	Q12324	675 aa		4.9	□□□□□ -1.63
RPL17A	YKL180W	GCD1	P09032	578 aa	Predicted RBP	4.89	□□□□□ -1.63
RPL17A	YKL180W	NAP1	P25293	417 aa	Known RBP	4.89	□□□□□ -1.63
RPL17A	YKL180W	MKK2	P32491	506 aa		4.89	□□□□□ -1.63
RPL17A	YKL180W	MNR2	P35724	969 aa		4.89	□□□□□ -1.63
RPL17A	YKL180W	ALG3	P38179	458 aa		4.89	□□□□□ -1.63
RPL17A	YKL180W	MAD1	P40957	749 aa		4.89	□□□□□ -1.63
RPL17A	YKL180W	RAT1	Q02792	1006 aa	Known RBP	4.89	□□□□□ -1.63
RPL17A	YKL180W	TMA46	Q12000	345 aa	Known RBP	4.89	□□□□□ -1.63
RPL17A	YKL180W	SYP1	P25623	870 aa	Known RBP	4.88	□□□□□ -1.63
RPL17A	YKL180W	AFG2	P32794	780 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	HXT13	P39924	564 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	OYE3	P41816	400 aa	Predicted RBP	4.88	□□□□□ -1.63
RPL17A	YKL180W	ENT3	P47160	408 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	INP52	P50942	1183 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	HXT17	P53631	564 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	HXT15	P54854	567 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	TRE1	Q08919	783 aa		4.88	□□□□□ -1.63
RPL17A	YKL180W	CDC34	P14682	295 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	CLN2	P20438	545 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	KIP1	P28742	1111 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPL17A	YKL180W	YJL045W	P47052	634 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	GNP1	P48813	663 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	SDH1	Q00711	640 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	BRE4	Q07660	1125 aa		4.87	□□□□□ -1.63
RPL17A	YKL180W	ADP1	P25371	1049 aa		4.86	□□□□□ -1.63
RPL17A	YKL180W	PRO1	P32264	428 aa		4.86	□□□□□ -1.63
RPL17A	YKL180W	RER2	P35196	286 aa		4.86	□□□□□ -1.63
RPL17A	YKL180W	YHL012W	P38709	493 aa		4.86	□□□□□ -1.63
RPL17A	YKL180W	CWC24	P53769	259 aa		4.86	□□□□□ -1.63
RPL17A	YKL180W	SKI3	P17883	1432 aa	Known RBP	4.86	□□□□□ -1.63
RPL17A	YKL180W	GPB2	P39717	880 aa		4.85	□□□□□ -1.63
RPL17A	YKL180W	CNN1	P43618	361 aa		4.85	□□□□□ -1.63
RPL17A	YKL180W	CTH1	P47976	325 aa		4.85	□□□□□ -1.63
RPL17A	YKL180W	SSY1	Q03770	852 aa		4.85	□□□□□ -1.63
RPL17A	YKL180W	MAG2	Q06436	670 aa	Known RBP	4.85	□□□□□ -1.63
RPL17A	YKL180W	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
RPL17A	YKL180W	MLS1	P30952	554 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	YSC84	P32793	468 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	PTC7	P38797	343 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	GTS1	P40956	396 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	NOP7	P53261	605 aa	Known RBP	4.84	□□□□□ -1.63
RPL17A	YKL180W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RPL17A	YKL180W	GDE1	Q02979	1223 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	YPL260W	Q08977	551 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	SPO21	Q12411	609 aa		4.84	□□□□□ -1.63
RPL17A	YKL180W	MDL2	P33311	773 aa		4.83	□□□□□ -1.64
RPL17A	YKL180W	DUT1	P33317	147 aa		4.83	□□□□□ -1.64
RPL17A	YKL180W	PAM1	P37304	830 aa	Known RBP	4.83	□□□□□ -1.64
RPL17A	YKL180W	MCM7	P38132	845 aa		4.83	□□□□□ -1.64
RPL17A	YKL180W	RGD1	P38339	666 aa		4.83	□□□□□ -1.64
RPL17A	YKL180W	PEX7	P39108	375 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms