RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C PIC2P40035 300 aa5.18□□□□□ -1.58
ATG27YJL178C BRE4Q07660 1125 aa5.18□□□□□ -1.58
ATG27YJL178C RAD2P07276 1031 aa5.17□□□□□ -1.58
ATG27YJL178C CIT3P43635 486 aa5.17□□□□□ -1.58
ATG27YJL178C YGL140CP53120 1219 aa5.17□□□□□ -1.58
ATG27YJL178C AVO1Q08236 1176 aa5.17□□□□□ -1.58
ATG27YJL178C TAF13P11747 167 aa5.16□□□□□ -1.58
ATG27YJL178C SEC23P15303 768 aaKnown RBP5.16□□□□□ -1.58
ATG27YJL178C PRE9P23638 258 aaKnown RBP5.16□□□□□ -1.58
ATG27YJL178C NFS1P25374 497 aa5.16□□□□□ -1.58
ATG27YJL178C LIP5P32875 414 aa5.16□□□□□ -1.58
ATG27YJL178C SMY2P32909 740 aaKnown RBP5.16□□□□□ -1.58
ATG27YJL178C OYE3P41816 400 aaPredicted RBP5.16□□□□□ -1.58
ATG27YJL178C MRPS18P42847 217 aa5.16□□□□□ -1.58
ATG27YJL178C SDH1Q00711 640 aa5.16□□□□□ -1.58
ATG27YJL178C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
ATG27YJL178C NNK1P36003 928 aa5.15□□□□□ -1.59
ATG27YJL178C YAR028WP39548 234 aa5.15□□□□□ -1.59
ATG27YJL178C XKS1P42826 600 aa5.15□□□□□ -1.59
ATG27YJL178C SNU71P53207 620 aaKnown RBP5.15□□□□□ -1.59
ATG27YJL178C RCM1P53972 490 aa5.15□□□□□ -1.59
ATG27YJL178C ATG14P38270 344 aa5.14□□□□□ -1.59
ATG27YJL178C RMD1Q03441 430 aa5.14□□□□□ -1.59
ATG27YJL178C RKM2Q03942 479 aa5.14□□□□□ -1.59
ATG27YJL178C ESF1Q06344 628 aaKnown RBP5.14□□□□□ -1.59
ATG27YJL178C YOR059CQ08448 450 aaKnown RBP5.14□□□□□ -1.59
ATG27YJL178C YVC1Q12324 675 aa5.14□□□□□ -1.59
ATG27YJL178C SGS1P35187 1447 aa5.14□□□□□ -1.59
ATG27YJL178C HSE1P38753 452 aa5.13□□□□□ -1.59
ATG27YJL178C LAP2Q10740 671 aa5.13□□□□□ -1.59
ATG27YJL178C RET1P22276 1149 aaKnown RBP5.12□□□□□ -1.59
ATG27YJL178C ADD66P36040 267 aa5.12□□□□□ -1.59
ATG27YJL178C PAM1P37304 830 aaKnown RBP5.12□□□□□ -1.59
ATG27YJL178C NMD3P38861 518 aaKnown RBP5.12□□□□□ -1.59
ATG27YJL178C PEX7P39108 375 aa5.12□□□□□ -1.59
ATG27YJL178C YNR063WP53749 607 aa5.12□□□□□ -1.59
ATG27YJL178C PUS7Q08647 676 aaKnown RBP5.12□□□□□ -1.59
ATG27YJL178C NSI1Q12457 570 aa5.12□□□□□ -1.59
ATG27YJL178C ENT3P47160 408 aa5.11□□□□□ -1.59
ATG27YJL178C RSA3Q05942 220 aaKnown RBP5.11□□□□□ -1.59
ATG27YJL178C YLR257WQ06146 321 aaKnown RBP5.11□□□□□ -1.59
ATG27YJL178C AFG2P32794 780 aa5.1□□□□□ -1.59
ATG27YJL178C TPP1Q03796 238 aa5.1□□□□□ -1.59
ATG27YJL178C JIP5Q06214 492 aaPredicted RBP5.1□□□□□ -1.59
ATG27YJL178C GCR1P07261 785 aa5.09□□□□□ -1.59
ATG27YJL178C LRG1P35688 1017 aa5.09□□□□□ -1.59
ATG27YJL178C VPS53P47061 822 aa5.09□□□□□ -1.59
ATG27YJL178C GNP1P48813 663 aa5.09□□□□□ -1.59
ATG27YJL178C SIW14P53965 281 aa5.09□□□□□ -1.59
ATG27YJL178C EST2Q06163 884 aa5.09□□□□□ -1.59
ATG27YJL178C HDA2Q06629 674 aa5.09□□□□□ -1.59
ATG27YJL178C HRK1Q08732 759 aaKnown RBP5.09□□□□□ -1.59
ATG27YJL178C TRE1Q08919 783 aa5.09□□□□□ -1.59
ATG27YJL178C QNS1P38795 714 aaKnown RBP5.08□□□□□ -1.6
ATG27YJL178C SSY1Q03770 852 aa5.08□□□□□ -1.6
ATG27YJL178C DED1P06634 604 aaKnown RBP5.07□□□□□ -1.6
ATG27YJL178C SAM35P14693 329 aa5.07□□□□□ -1.6
ATG27YJL178C PET112P33893 541 aa5.07□□□□□ -1.6
ATG27YJL178C HXT13P39924 564 aa5.07□□□□□ -1.6
ATG27YJL178C AVT1P47082 602 aa5.07□□□□□ -1.6
ATG27YJL178C HXT17P53631 564 aa5.07□□□□□ -1.6
ATG27YJL178C HXT15P54854 567 aa5.07□□□□□ -1.6
ATG27YJL178C MRL1Q06815 381 aa5.07□□□□□ -1.6
ATG27YJL178C LPX1Q12405 387 aaKnown RBP5.07□□□□□ -1.6
ATG27YJL178C NAP1P25293 417 aaKnown RBP5.06□□□□□ -1.6
ATG27YJL178C PRO1P32264 428 aa5.06□□□□□ -1.6
ATG27YJL178C HSP78P33416 811 aa5.06□□□□□ -1.6
ATG27YJL178C YJL045WP47052 634 aa5.06□□□□□ -1.6
ATG27YJL178C ROD1Q02805 837 aa5.06□□□□□ -1.6
ATG27YJL178C ADP1P25371 1049 aa5.05□□□□□ -1.6
ATG27YJL178C DUT1P33317 147 aa5.05□□□□□ -1.6
ATG27YJL178C POL12P38121 705 aaPredicted RBP5.05□□□□□ -1.6
ATG27YJL178C PTC7P38797 343 aa5.05□□□□□ -1.6
ATG27YJL178C ORC3P54790 616 aa5.05□□□□□ -1.6
ATG27YJL178C RAT1Q02792 1006 aaKnown RBP5.05□□□□□ -1.6
ATG27YJL178C RTT10Q08924 1013 aa5.05□□□□□ -1.6
ATG27YJL178C SEG2P34250 1132 aa5.04□□□□□ -1.6
ATG27YJL178C MNR2P35724 969 aa5.04□□□□□ -1.6
ATG27YJL178C ALG3P38179 458 aa5.04□□□□□ -1.6
ATG27YJL178C GTS1P40956 396 aa5.04□□□□□ -1.6
ATG27YJL178C NOP7P53261 605 aaKnown RBP5.04□□□□□ -1.6
ATG27YJL178C SVF1Q05515 481 aa5.04□□□□□ -1.6
ATG27YJL178C PTC5Q12511 572 aa5.04□□□□□ -1.6
ATG27YJL178C DFG16Q99234 619 aa5.04□□□□□ -1.6
ATG27YJL178C RAD27P26793 382 aa5.03□□□□□ -1.6
ATG27YJL178C KIP1P28742 1111 aa5.03□□□□□ -1.6
ATG27YJL178C MKK2P32491 506 aa5.03□□□□□ -1.6
ATG27YJL178C YHL012WP38709 493 aa5.03□□□□□ -1.6
ATG27YJL178C MET10P39692 1035 aa5.03□□□□□ -1.6
ATG27YJL178C MAD1P40957 749 aa5.03□□□□□ -1.6
ATG27YJL178C VPS16Q03308 798 aa5.03□□□□□ -1.6
ATG27YJL178C TMA46Q12000 345 aaKnown RBP5.03□□□□□ -1.6
ATG27YJL178C CDC34P14682 295 aa5.02□□□□□ -1.61
ATG27YJL178C YSC84P32793 468 aa5.02□□□□□ -1.61
ATG27YJL178C ELM1P32801 640 aa5.02□□□□□ -1.61
ATG27YJL178C RCL1Q08096 367 aaPredicted RBP5.02□□□□□ -1.61
ATG27YJL178C YPL260WQ08977 551 aa5.02□□□□□ -1.61
ATG27YJL178C PIN2Q12057 282 aa5.02□□□□□ -1.61
ATG27YJL178C RNQ1P25367 405 aa5.01□□□□□ -1.61
ATG27YJL178C SRO9P25567 434 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms