RNA–Protein interactions for RNA: YHR214C-B

YHR214C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHR214C-B, Length 5,382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR214C-BYHR214C-B SMC5Q08204 1093 aa2.09□□□□□ -2.08
YHR214C-BYHR214C-B PSK2Q08217 1101 aa2.09□□□□□ -2.08
YHR214C-BYHR214C-B RRP6Q12149 733 aaKnown RBP2.09□□□□□ -2.08
YHR214C-BYHR214C-B GET3Q12154 354 aaKnown RBP2.09□□□□□ -2.08
YHR214C-BYHR214C-B RTP1Q12751 981 aa2.09□□□□□ -2.08
YHR214C-BYHR214C-B YKL033W-AQ86ZR7 236 aa2.09□□□□□ -2.08
YHR214C-BYHR214C-B CDC37P06101 506 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B CLB1P24868 471 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B FUB1P25659 250 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B NTH1P32356 751 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B FRE1P32791 686 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B MDJ1P35191 511 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B ATG19P35193 415 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B YNG2P38806 282 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B HMF1P40037 129 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B PEA2P40091 420 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B YJR079WP47126 109 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B INA17Q02888 182 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B JIP4Q03361 876 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B IOC4Q04213 475 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B PEX15Q08215 383 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B GRE2Q12068 342 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B SPE3Q12074 293 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B YOR131CQ12486 218 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B PGA3Q12746 312 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B CHC1P22137 1653 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B BCK1Q01389 1478 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B FRS2P15625 503 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B NIP100P33420 868 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B YGL242CP53066 181 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B NAF1P53919 492 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B GTT2Q12390 233 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B SNF1P06782 633 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B LPD1P09624 499 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B GFA1P14742 717 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B DBP3P20447 523 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B PHO87P25360 923 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B PAT1P25644 796 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B SKG6P32900 734 aaPredicted RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B GIC1P38785 314 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B PSY2P40164 858 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B TGL3P40308 642 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B SAE2P46946 345 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B RSM7P47150 247 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B ECL1P48235 211 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B YNL247WP53852 767 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B SEC5P89102 971 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B RCF1Q03713 159 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B MTC5Q03897 1148 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B YLL054CQ12244 843 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B PRP9P19736 530 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B BLI1P35727 113 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B RRD1P40454 393 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B YIL055CP40523 627 aaKnown RBP2.08□□□□□ -2.08
YHR214C-BYHR214C-B DAK2P43550 591 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B MIC19P43594 170 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B SHE10P53075 577 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B NOP13P53883 403 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
YHR214C-BYHR214C-B YLR297WQ05899 129 aa2.08□□□□□ -2.08
YHR214C-BYHR214C-B RPB2P08518 1224 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B SSB1P11484 613 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B SUP45P12385 437 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B LST4P34239 828 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B GRS1P38088 690 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B SSB2P40150 613 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B DUS1P53759 423 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B APP1P53933 587 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B MLC2Q06580 163 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B RPO41P13433 1351 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B SPO16P17122 198 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B PTP1P25044 335 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B SWC3P31376 625 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B IRE1P32361 1115 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B DEF1P35732 738 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B YAP1801P38856 637 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B RIX1P38883 763 aaPredicted RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B DPH1P40487 425 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B BUD8P41698 603 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B SEC27P41811 889 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B FYV8P46949 817 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B FPK1P53739 893 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B UBP3Q01477 912 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YHR214C-BYHR214C-B TFB2Q02939 513 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B ERV41Q04651 352 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B RAV1P47104 1357 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B GCN2P15442 1659 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B NUP188P52593 1655 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B YRF1-1P0CX20 1796 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B YRF1-5P0CX21 1796 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B YRF1-8P0CX22 1796 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B PDR15Q04182 1529 aaKnown RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B CBS2P14905 389 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B TUP1P16649 713 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B MEI5P32489 222 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B DLD1P32891 587 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B MCX1P38323 520 aaPredicted RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B RTR1P40084 226 aaPredicted RBP2.07□□□□□ -2.08
YHR214C-BYHR214C-B CNN1P43618 361 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B SUM1P46676 1062 aa2.07□□□□□ -2.08
YHR214C-BYHR214C-B YGR283CP53336 341 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 152.5 ms