RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	TPO2	P53283	614 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	YNR029C	P53729	429 aa	Known RBP	5.42	□□□□□ -1.54
VMA22	YHR060W	PMT7	Q06644	662 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	SLP1	Q12232	587 aa		5.42	□□□□□ -1.54
VMA22	YHR060W	FUS1	P11710	512 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	PRP9	P19736	530 aa	Known RBP	5.41	□□□□□ -1.54
VMA22	YHR060W	ARE1	P25628	610 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	RPL8B	P29453	256 aa	Known RBP	5.41	□□□□□ -1.54
VMA22	YHR060W	PBY1	P38254	753 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	ENP1	P38333	483 aa	Known RBP	5.41	□□□□□ -1.54
VMA22	YHR060W	LEM3	P42838	414 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	NUT1	P53114	1132 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	UGO1	Q03327	502 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	MSH6	Q03834	1242 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	EAF1	Q06337	982 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	FMP25	Q08023	583 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	NHA1	Q99271	985 aa		5.41	□□□□□ -1.54
VMA22	YHR060W	SBP1	P10080	294 aa	Known RBP	5.4	□□□□□ -1.54
VMA22	YHR060W	ALG14	P38242	237 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	SHU2	P38957	223 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	PIC2	P40035	300 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	INP51	P40559	946 aa	Known RBP	5.4	□□□□□ -1.54
VMA22	YHR060W	XKS1	P42826	600 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	YJL181W	P46987	611 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	PMT3	P47190	753 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	HLJ1	P48353	224 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	MON1	P53129	644 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	GUP1	P53154	560 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	YNR014W	P53719	212 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	THI72	Q08579	599 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	PHM7	Q12252	991 aa		5.4	□□□□□ -1.54
VMA22	YHR060W	ERR1	P0CX10	437 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	ERR2	P0CX11	437 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	RPL8A	P17076	256 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	PYC2	P32327	1180 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	VPS24	P36095	224 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	BOI2	P39969	1040 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	ZDS1	P50111	915 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	BIO5	P53744	561 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	FOL1	P53848	824 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	EEB1	Q02891	456 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
VMA22	YHR060W	GIS4	Q04233	774 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	TMA64	Q04600	565 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	YDL121C	Q07541	149 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	YDL124W	Q07551	312 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	NTG2	Q08214	380 aa		5.39	□□□□□ -1.55
VMA22	YHR060W	TMA7	Q3E764	64 aa	Known RBP	5.39	□□□□□ -1.55
VMA22	YHR060W	LYP1	P32487	611 aa		5.38	□□□□□ -1.55
VMA22	YHR060W	PGM2	P37012	569 aa	Known RBP	5.38	□□□□□ -1.55
VMA22	YHR060W	UTP8	P53276	713 aa	Known RBP	5.38	□□□□□ -1.55
VMA22	YHR060W	NSG2	P53898	299 aa		5.38	□□□□□ -1.55
VMA22	YHR060W	ECM16	Q04217	1267 aa	Known RBP	5.38	□□□□□ -1.55
VMA22	YHR060W	SOG2	Q08817	791 aa		5.38	□□□□□ -1.55
VMA22	YHR060W	NAR1	P23503	491 aa	Known RBP	5.37	□□□□□ -1.55
VMA22	YHR060W	UGA4	P32837	571 aa		5.37	□□□□□ -1.55
VMA22	YHR060W	STE5	P32917	917 aa		5.37	□□□□□ -1.55
VMA22	YHR060W	ICP55	P40051	511 aa		5.37	□□□□□ -1.55
VMA22	YHR060W	YGR237C	P50089	785 aa		5.37	□□□□□ -1.55
VMA22	YHR060W	MRP10	O75012	95 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	TRP2	P00899	507 aa	Known RBP	5.36	□□□□□ -1.55
VMA22	YHR060W	SEC23	P15303	768 aa	Known RBP	5.36	□□□□□ -1.55
VMA22	YHR060W	PEX6	P33760	1030 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	VBA5	P36172	582 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	MCX1	P38323	520 aa	Predicted RBP	5.36	□□□□□ -1.55
VMA22	YHR060W	PEX28	P38848	579 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	SAP155	P43612	1002 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	SIW14	P53965	281 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	TFB2	Q02939	513 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	NUP145	P49687	1317 aa		5.36	□□□□□ -1.55
VMA22	YHR060W	ATP4	P05626	244 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	VMA4	P22203	233 aa	Known RBP	5.35	□□□□□ -1.55
VMA22	YHR060W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
VMA22	YHR060W	GIP2	P40036	548 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	SBE2	P42223	864 aa	Known RBP	5.35	□□□□□ -1.55
VMA22	YHR060W	YFL066C	P43538	392 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	GNP1	P48813	663 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	HSV2	P50079	448 aa	Predicted RBP	5.35	□□□□□ -1.55
VMA22	YHR060W	PEX8	P53248	589 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	SOK2	P53438	785 aa	Predicted RBP	5.35	□□□□□ -1.55
VMA22	YHR060W	CTR9	P89105	1077 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	TAF8	Q03750	510 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	GIC2	Q06648	383 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	SLX4	Q12098	748 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	GLO4	Q12320	285 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	NKP1	Q12493	238 aa		5.35	□□□□□ -1.55
VMA22	YHR060W	CDC11	P32458	415 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	ALR2	P43553	858 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	DAS1	P47005	663 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	YJR124C	P47159	448 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	ESC2	Q06340	456 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	ATG13	Q06628	738 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	PUS1	Q12211	544 aa	Known RBP	5.34	□□□□□ -1.55
VMA22	YHR060W	NYV1	Q12255	253 aa		5.34	□□□□□ -1.55
VMA22	YHR060W	TY4B-P	A0A0B7P3V8	1104 aa		5.33	□□□□□ -1.56
VMA22	YHR060W	THS1	P04801	734 aa	Known RBP	5.33	□□□□□ -1.56
VMA22	YHR060W	SAC7	P17121	654 aa		5.33	□□□□□ -1.56
VMA22	YHR060W	GSY1	P23337	708 aa		5.33	□□□□□ -1.56
VMA22	YHR060W	ABD1	P32783	436 aa	Predicted RBP	5.33	□□□□□ -1.56
VMA22	YHR060W	TFA2	P36145	328 aa		5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms