RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YAR028WP39548 234 aa5.09□□□□□ -1.59
LOC1YFR001W GNP1P48813 663 aa5.09□□□□□ -1.59
LOC1YFR001W EST2Q06163 884 aa5.09□□□□□ -1.59
LOC1YFR001W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
LOC1YFR001W ATG14P38270 344 aa5.08□□□□□ -1.6
LOC1YFR001W MSH4P40965 878 aaPredicted RBP5.08□□□□□ -1.6
LOC1YFR001W RKM2Q03942 479 aa5.08□□□□□ -1.6
LOC1YFR001W MRL1Q06815 381 aa5.08□□□□□ -1.6
LOC1YFR001W CHS2P14180 963 aa5.07□□□□□ -1.6
LOC1YFR001W PET112P33893 541 aa5.07□□□□□ -1.6
LOC1YFR001W MNR2P35724 969 aa5.07□□□□□ -1.6
LOC1YFR001W YNR063WP53749 607 aa5.07□□□□□ -1.6
LOC1YFR001W SIW14P53965 281 aa5.07□□□□□ -1.6
LOC1YFR001W RTT10Q08924 1013 aa5.07□□□□□ -1.6
LOC1YFR001W RPS4AP0CX35 261 aaKnown RBP5.06□□□□□ -1.6
LOC1YFR001W RPS4BP0CX36 261 aaKnown RBP5.06□□□□□ -1.6
LOC1YFR001W SMY2P32909 740 aaKnown RBP5.06□□□□□ -1.6
LOC1YFR001W NNK1P36003 928 aa5.06□□□□□ -1.6
LOC1YFR001W HXT13P39924 564 aa5.06□□□□□ -1.6
LOC1YFR001W ENT3P47160 408 aa5.06□□□□□ -1.6
LOC1YFR001W CTH1P47976 325 aa5.06□□□□□ -1.6
LOC1YFR001W YGR130CP53278 816 aa5.06□□□□□ -1.6
LOC1YFR001W HXT17P53631 564 aa5.06□□□□□ -1.6
LOC1YFR001W HXT15P54854 567 aa5.06□□□□□ -1.6
LOC1YFR001W ROD1Q02805 837 aa5.06□□□□□ -1.6
LOC1YFR001W LAP2Q10740 671 aa5.06□□□□□ -1.6
LOC1YFR001W DED1P06634 604 aaKnown RBP5.05□□□□□ -1.6
LOC1YFR001W CDC34P14682 295 aa5.05□□□□□ -1.6
LOC1YFR001W NAP1P25293 417 aaKnown RBP5.05□□□□□ -1.6
LOC1YFR001W NFS1P25374 497 aa5.05□□□□□ -1.6
LOC1YFR001W PUB1P32588 453 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
LOC1YFR001W AFG2P32794 780 aa5.05□□□□□ -1.6
LOC1YFR001W DUT1P33317 147 aa5.05□□□□□ -1.6
LOC1YFR001W TOS1P38288 455 aa5.05□□□□□ -1.6
LOC1YFR001W HSE1P38753 452 aa5.05□□□□□ -1.6
LOC1YFR001W ALT1P52893 592 aa5.05□□□□□ -1.6
LOC1YFR001W JIP5Q06214 492 aaPredicted RBP5.05□□□□□ -1.6
LOC1YFR001W RET1P22276 1149 aaKnown RBP5.04□□□□□ -1.6
LOC1YFR001W RAD27P26793 382 aa5.04□□□□□ -1.6
LOC1YFR001W MKK2P32491 506 aa5.04□□□□□ -1.6
LOC1YFR001W EAR1Q03212 550 aa5.04□□□□□ -1.6
LOC1YFR001W RSA3Q05942 220 aaKnown RBP5.04□□□□□ -1.6
LOC1YFR001W YLR257WQ06146 321 aaKnown RBP5.04□□□□□ -1.6
LOC1YFR001W MSB1P21339 1137 aaKnown RBP5.03□□□□□ -1.6
LOC1YFR001W WHI3P34761 661 aaKnown RBP5.03□□□□□ -1.6
LOC1YFR001W QNS1P38795 714 aaKnown RBP5.03□□□□□ -1.6
LOC1YFR001W MMM1P41800 426 aa5.03□□□□□ -1.6
LOC1YFR001W NOP7P53261 605 aaKnown RBP5.03□□□□□ -1.6
LOC1YFR001W VPS16Q03308 798 aa5.03□□□□□ -1.6
LOC1YFR001W TMA46Q12000 345 aaKnown RBP5.03□□□□□ -1.6
LOC1YFR001W PIN2Q12057 282 aa5.03□□□□□ -1.6
LOC1YFR001W RER2P35196 286 aa5.02□□□□□ -1.61
LOC1YFR001W MET10P39692 1035 aa5.02□□□□□ -1.61
LOC1YFR001W IRC24P40580 263 aa5.02□□□□□ -1.61
LOC1YFR001W MAD1P40957 749 aa5.02□□□□□ -1.61
LOC1YFR001W CIT3P43635 486 aa5.02□□□□□ -1.61
LOC1YFR001W VPS53P47061 822 aa5.02□□□□□ -1.61
LOC1YFR001W RAT1Q02792 1006 aaKnown RBP5.02□□□□□ -1.61
LOC1YFR001W MAG2Q06436 670 aaKnown RBP5.02□□□□□ -1.61
LOC1YFR001W BRE4Q07660 1125 aa5.02□□□□□ -1.61
LOC1YFR001W CYC7P00045 113 aa5.01□□□□□ -1.61
LOC1YFR001W CLN2P20438 545 aa5.01□□□□□ -1.61
LOC1YFR001W LIP5P32875 414 aa5.01□□□□□ -1.61
LOC1YFR001W ALG3P38179 458 aa5.01□□□□□ -1.61
LOC1YFR001W NMD3P38861 518 aaKnown RBP5.01□□□□□ -1.61
LOC1YFR001W PUS7Q08647 676 aaKnown RBP5.01□□□□□ -1.61
LOC1YFR001W PTC5Q12511 572 aa5.01□□□□□ -1.61
LOC1YFR001W SYP1P25623 870 aaKnown RBP5□□□□□ -1.61
LOC1YFR001W YGR053CP53234 283 aa5□□□□□ -1.61
LOC1YFR001W RCM1P53972 490 aa5□□□□□ -1.61
LOC1YFR001W EEB1Q02891 456 aa5□□□□□ -1.61
LOC1YFR001W TPP1Q03796 238 aa5□□□□□ -1.61
LOC1YFR001W YOR059CQ08448 450 aaKnown RBP5□□□□□ -1.61
LOC1YFR001W YVC1Q12324 675 aa5□□□□□ -1.61
LOC1YFR001W CNN1P43618 361 aa4.99□□□□□ -1.61
LOC1YFR001W AVT1P47082 602 aa4.99□□□□□ -1.61
LOC1YFR001W FAA4P47912 694 aaKnown RBP4.99□□□□□ -1.61
LOC1YFR001W CWC24P53769 259 aa4.99□□□□□ -1.61
LOC1YFR001W GDE1Q02979 1223 aa4.99□□□□□ -1.61
LOC1YFR001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
LOC1YFR001W HRK1Q08732 759 aaKnown RBP4.99□□□□□ -1.61
LOC1YFR001W DBP5P20449 482 aaKnown RBP4.98□□□□□ -1.61
LOC1YFR001W KIP1P28742 1111 aa4.98□□□□□ -1.61
LOC1YFR001W LYP1P32487 611 aa4.98□□□□□ -1.61
LOC1YFR001W OYE3P41816 400 aaPredicted RBP4.98□□□□□ -1.61
LOC1YFR001W YJL045WP47052 634 aa4.98□□□□□ -1.61
LOC1YFR001W TRP2P00899 507 aaKnown RBP4.97□□□□□ -1.61
LOC1YFR001W SEA4P38164 1038 aa4.97□□□□□ -1.61
LOC1YFR001W RGD1P38339 666 aa4.97□□□□□ -1.61
LOC1YFR001W VAC8P39968 578 aa4.97□□□□□ -1.61
LOC1YFR001W TYW3P53177 273 aa4.97□□□□□ -1.61
LOC1YFR001W TIF35Q04067 274 aaKnown RBP4.97□□□□□ -1.61
LOC1YFR001W GCD1P09032 578 aaPredicted RBP4.96□□□□□ -1.62
LOC1YFR001W MLS1P30952 554 aa4.96□□□□□ -1.62
LOC1YFR001W PEX7P39108 375 aa4.96□□□□□ -1.62
LOC1YFR001W GPB2P39717 880 aa4.96□□□□□ -1.62
LOC1YFR001W MPH1P40562 993 aa4.96□□□□□ -1.62
LOC1YFR001W ALD6P54115 500 aaKnown RBP4.96□□□□□ -1.62
LOC1YFR001W TRE1Q08919 783 aa4.96□□□□□ -1.62
LOC1YFR001W YPL260WQ08977 551 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms