RNA–Protein interactions for RNA: YER057C

HMF1, Transcript of Member of the p14.5 protein family, yeast

Gene HMF1, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMF1	YER057C	NAM7	P30771	971 aa	Known RBP	4.09	□□□□□ -1.75
HMF1	YER057C	PYC2	P32327	1180 aa	Known RBP	4.09	□□□□□ -1.75
HMF1	YER057C	AKR1	P39010	764 aa		4.09	□□□□□ -1.75
HMF1	YER057C	YJR124C	P47159	448 aa		4.09	□□□□□ -1.75
HMF1	YER057C	NCE103	P53615	221 aa		4.09	□□□□□ -1.75
HMF1	YER057C	YNR065C	P53751	1116 aa		4.09	□□□□□ -1.75
HMF1	YER057C	RCM1	P53972	490 aa		4.09	□□□□□ -1.75
HMF1	YER057C	SPO71	Q03868	1245 aa		4.09	□□□□□ -1.75
HMF1	YER057C	YRF1-3	P0CX14	1859 aa		4.09	□□□□□ -1.76
HMF1	YER057C	YRF1-7	P0CX15	1859 aa		4.09	□□□□□ -1.76
HMF1	YER057C	YRF1-6	P53819	1859 aa		4.09	□□□□□ -1.76
HMF1	YER057C	MAE1	P36013	669 aa	Known RBP	4.08	□□□□□ -1.76
HMF1	YER057C	CTH1	P47976	325 aa		4.08	□□□□□ -1.76
HMF1	YER057C	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
HMF1	YER057C	ELG1	Q12050	791 aa		4.08	□□□□□ -1.76
HMF1	YER057C	CHS2	P14180	963 aa		4.07	□□□□□ -1.76
HMF1	YER057C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
HMF1	YER057C	TOS1	P38288	455 aa		4.07	□□□□□ -1.76
HMF1	YER057C	NEO1	P40527	1151 aa		4.07	□□□□□ -1.76
HMF1	YER057C	YGR130C	P53278	816 aa		4.07	□□□□□ -1.76
HMF1	YER057C	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
HMF1	YER057C	YIL177C	P40434	1758 aa		4.07	□□□□□ -1.76
HMF1	YER057C	YJL225C	P40889	1758 aa		4.07	□□□□□ -1.76
HMF1	YER057C	ERS1	P17261	260 aa		4.06	□□□□□ -1.76
HMF1	YER057C	PRP45	P28004	379 aa	Predicted RBP	4.06	□□□□□ -1.76
HMF1	YER057C	SPO74	P45819	413 aa		4.06	□□□□□ -1.76
HMF1	YER057C	URB1	P34241	1764 aa	Known RBP	4.06	□□□□□ -1.76
HMF1	YER057C	YRF1-2	P40105	1681 aa		4.06	□□□□□ -1.76
HMF1	YER057C	COB	P00163	385 aa		4.05	□□□□□ -1.76
HMF1	YER057C	SPE2	P21182	396 aa		4.05	□□□□□ -1.76
HMF1	YER057C	NAP1	P25293	417 aa	Known RBP	4.05	□□□□□ -1.76
HMF1	YER057C	FET4	P40988	552 aa		4.05	□□□□□ -1.76
HMF1	YER057C	KIP3	P53086	805 aa	Known RBP	4.05	□□□□□ -1.76
HMF1	YER057C	ORC1	P54784	914 aa	Predicted RBP	4.05	□□□□□ -1.76
HMF1	YER057C	RSC4	Q02206	625 aa		4.05	□□□□□ -1.76
HMF1	YER057C	MAG2	Q06436	670 aa	Known RBP	4.05	□□□□□ -1.76
HMF1	YER057C	BRE4	Q07660	1125 aa		4.05	□□□□□ -1.76
HMF1	YER057C	MLP1	Q02455	1875 aa	Known RBP	4.05	□□□□□ -1.76
HMF1	YER057C	FKS3	Q04952	1785 aa		4.04	□□□□□ -1.76
HMF1	YER057C	MSB1	P21339	1137 aa	Known RBP	4.04	□□□□□ -1.76
HMF1	YER057C	PRP5	P21372	849 aa	Predicted RBP	4.04	□□□□□ -1.76
HMF1	YER057C	IRC24	P40580	263 aa		4.04	□□□□□ -1.76
HMF1	YER057C	UFD2	P54860	961 aa		4.04	□□□□□ -1.76
HMF1	YER057C	YMR074C	Q04773	145 aa		4.04	□□□□□ -1.76
HMF1	YER057C	IMH1	Q06704	911 aa	Known RBP	4.04	□□□□□ -1.76
HMF1	YER057C	PSK1	P31374	1356 aa		4.03	□□□□□ -1.76
HMF1	YER057C	ADE6	P38972	1358 aa	Known RBP	4.03	□□□□□ -1.76
HMF1	YER057C	CYC7	P00045	113 aa		4.03	□□□□□ -1.76
HMF1	YER057C	LIP5	P32875	414 aa		4.03	□□□□□ -1.76
HMF1	YER057C	RIM11	P38615	370 aa		4.03	□□□□□ -1.76
HMF1	YER057C	GLO3	P38682	493 aa	Known RBP	4.03	□□□□□ -1.76
HMF1	YER057C	CHZ1	P40019	153 aa	Predicted RBP	4.03	□□□□□ -1.76
HMF1	YER057C	QDR1	P40475	563 aa		4.03	□□□□□ -1.76
HMF1	YER057C	ATG1	P53104	897 aa		4.03	□□□□□ -1.76
HMF1	YER057C	FAR11	P53917	953 aa		4.03	□□□□□ -1.76
HMF1	YER057C	KAR5	Q04746	504 aa		4.03	□□□□□ -1.76
HMF1	YER057C	DUR3	P33413	735 aa		4.02	□□□□□ -1.77
HMF1	YER057C	PRP43	P53131	767 aa	Known RBP	4.02	□□□□□ -1.77
HMF1	YER057C	GIC2	Q06648	383 aa		4.02	□□□□□ -1.77
HMF1	YER057C	MNL2	Q12205	849 aa		4.02	□□□□□ -1.77
HMF1	YER057C	AVT1	P47082	602 aa		4.01	□□□□□ -1.77
HMF1	YER057C	ACF4	P47129	309 aa		4.01	□□□□□ -1.77
HMF1	YER057C	RPL34A	P87262	121 aa	Predicted RBP	4.01	□□□□□ -1.77
HMF1	YER057C	MSH6	Q03834	1242 aa		4.01	□□□□□ -1.77
HMF1	YER057C	YIG1	Q08956	461 aa		4.01	□□□□□ -1.77
HMF1	YER057C	YOR223W	Q12015	292 aa		4.01	□□□□□ -1.77
HMF1	YER057C	CMR1	Q12510	522 aa	Known RBP	4.01	□□□□□ -1.77
HMF1	YER057C	YLR419W	Q06698	1435 aa	Known RBP	4.01	□□□□□ -1.77
HMF1	YER057C	YML133C	Q03099	1374 aa		4.01	□□□□□ -1.77
HMF1	YER057C	YLL067C	Q07888	1374 aa		4.01	□□□□□ -1.77
HMF1	YER057C	YLL066C	Q99208	1374 aa		4.01	□□□□□ -1.77
HMF1	YER057C	LEU2	P04173	364 aa	Predicted RBP	4	□□□□□ -1.77
HMF1	YER057C	RPS24A	P0CX31	135 aa	Known RBP	4	□□□□□ -1.77
HMF1	YER057C	RPS24B	P0CX32	135 aa	Known RBP	4	□□□□□ -1.77
HMF1	YER057C	NPR1	P22211	790 aa		4	□□□□□ -1.77
HMF1	YER057C	ELM1	P32801	640 aa		4	□□□□□ -1.77
HMF1	YER057C	SEA4	P38164	1038 aa		4	□□□□□ -1.77
HMF1	YER057C	DOT5	P40553	215 aa		4	□□□□□ -1.77
HMF1	YER057C	GCV1	P48015	400 aa		4	□□□□□ -1.77
HMF1	YER057C	TRS120	Q04183	1289 aa		4	□□□□□ -1.77
HMF1	YER057C	AOS1	Q06624	347 aa		4	□□□□□ -1.77
HMF1	YER057C	HTS1	P07263	546 aa	Known RBP	3.99	□□□□□ -1.77
HMF1	YER057C	TRL1	P09880	827 aa	Known RBP	3.99	□□□□□ -1.77
HMF1	YER057C	SAP155	P43612	1002 aa		3.99	□□□□□ -1.77
HMF1	YER057C	SLM3	Q12093	417 aa		3.99	□□□□□ -1.77
HMF1	YER057C	GCD1	P09032	578 aa	Predicted RBP	3.98	□□□□□ -1.77
HMF1	YER057C	GPT2	P36148	743 aa		3.98	□□□□□ -1.77
HMF1	YER057C	MTR4	P47047	1073 aa	Known RBP	3.98	□□□□□ -1.77
HMF1	YER057C	YNL011C	P53980	444 aa		3.98	□□□□□ -1.77
HMF1	YER057C	APC1	P53886	1748 aa		3.98	□□□□□ -1.77
HMF1	YER057C	FLP1	P03870	423 aa		3.97	□□□□□ -1.77
HMF1	YER057C	SSA1	P10591	642 aa	Known RBP	3.97	□□□□□ -1.77
HMF1	YER057C	MMM1	P41800	426 aa		3.97	□□□□□ -1.77
HMF1	YER057C	RPN11	P43588	306 aa	Known RBP	3.97	□□□□□ -1.77
HMF1	YER057C	CDC55	Q00362	526 aa		3.97	□□□□□ -1.77
HMF1	YER057C	SDH1	Q00711	640 aa		3.97	□□□□□ -1.77
HMF1	YER057C	DOT1	Q04089	582 aa	Known RBP	3.97	□□□□□ -1.77
HMF1	YER057C	BSC2	Q05611	235 aa		3.97	□□□□□ -1.77
HMF1	YER057C	YLL054C	Q12244	843 aa		3.97	□□□□□ -1.77
HMF1	YER057C	WHI3	P34761	661 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms