RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	UTP22	P53254	1237 aa	Predicted RBP	4.65	□□□□□ -1.66
RPN3	YER021W	DRS2	P39524	1355 aa		4.65	□□□□□ -1.66
RPN3	YER021W	TRP3	P00937	484 aa		4.65	□□□□□ -1.67
RPN3	YER021W	MSH3	P25336	1018 aa		4.65	□□□□□ -1.67
RPN3	YER021W	MAE1	P36013	669 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	YKR073C	P36153	106 aa		4.65	□□□□□ -1.67
RPN3	YER021W	MRPS18	P42847	217 aa		4.65	□□□□□ -1.67
RPN3	YER021W	GCV1	P48015	400 aa		4.65	□□□□□ -1.67
RPN3	YER021W	PEX13	P80667	386 aa		4.65	□□□□□ -1.67
RPN3	YER021W	MCD1	Q12158	566 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-H	O13535	1793 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-DR5	P0C2I2	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-DR6	P0C2I3	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-LR2	P0C2I5	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-PR2	P0C2J0	1756 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-JR1	P47098	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-ER1	Q03612	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-GR2	Q12269	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-OL	Q12273	1755 aa		4.65	□□□□□ -1.67
RPN3	YER021W	TY1B-PL	Q12414	1755 aa	Known RBP	4.65	□□□□□ -1.67
RPN3	YER021W	SFA1	P32771	386 aa		4.64	□□□□□ -1.67
RPN3	YER021W	SQT1	P35184	431 aa		4.64	□□□□□ -1.67
RPN3	YER021W	PEX28	P38848	579 aa		4.64	□□□□□ -1.67
RPN3	YER021W	SHU2	P38957	223 aa		4.64	□□□□□ -1.67
RPN3	YER021W	ESF1	Q06344	628 aa	Known RBP	4.64	□□□□□ -1.67
RPN3	YER021W	YOR093C	Q12275	1648 aa		4.64	□□□□□ -1.67
RPN3	YER021W	HEM13	P11353	328 aa	Known RBP	4.63	□□□□□ -1.67
RPN3	YER021W	PEP7	P32609	515 aa		4.63	□□□□□ -1.67
RPN3	YER021W	YKL077W	P36081	392 aa		4.63	□□□□□ -1.67
RPN3	YER021W	NEM1	P38757	446 aa		4.63	□□□□□ -1.67
RPN3	YER021W	KIP3	P53086	805 aa	Known RBP	4.63	□□□□□ -1.67
RPN3	YER021W	YGL140C	P53120	1219 aa		4.63	□□□□□ -1.67
RPN3	YER021W	FAR11	P53917	953 aa		4.63	□□□□□ -1.67
RPN3	YER021W	MEC3	Q02574	474 aa		4.63	□□□□□ -1.67
RPN3	YER021W	YRF1-1	P0CX20	1796 aa		4.63	□□□□□ -1.67
RPN3	YER021W	YRF1-5	P0CX21	1796 aa		4.63	□□□□□ -1.67
RPN3	YER021W	YRF1-8	P0CX22	1796 aa		4.63	□□□□□ -1.67
RPN3	YER021W	TY2B-B	Q12491	1770 aa		4.63	□□□□□ -1.67
RPN3	YER021W	PAM1	P37304	830 aa	Known RBP	4.62	□□□□□ -1.67
RPN3	YER021W	RDH54	P38086	958 aa		4.62	□□□□□ -1.67
RPN3	YER021W	SLS1	P42900	643 aa		4.62	□□□□□ -1.67
RPN3	YER021W	NCE103	P53615	221 aa		4.62	□□□□□ -1.67
RPN3	YER021W	RMD1	Q03441	430 aa		4.62	□□□□□ -1.67
RPN3	YER021W	YMR074C	Q04773	145 aa		4.62	□□□□□ -1.67
RPN3	YER021W	VPS15	P22219	1454 aa		4.62	□□□□□ -1.67
RPN3	YER021W	SEC23	P15303	768 aa	Known RBP	4.61	□□□□□ -1.67
RPN3	YER021W	ARI1	P53111	347 aa	Known RBP	4.61	□□□□□ -1.67
RPN3	YER021W	VMA4	P22203	233 aa	Known RBP	4.61	□□□□□ -1.67
RPN3	YER021W	ARL1	P38116	183 aa	Known RBP	4.61	□□□□□ -1.67
RPN3	YER021W	REI1	P38344	393 aa	Predicted RBP	4.61	□□□□□ -1.67
RPN3	YER021W	CTH1	P47976	325 aa		4.61	□□□□□ -1.67
RPN3	YER021W	ALG6	Q12001	544 aa	Known RBP	4.61	□□□□□ -1.67
RPN3	YER021W	YOR223W	Q12015	292 aa		4.61	□□□□□ -1.67
RPN3	YER021W	REC8	Q12188	680 aa		4.61	□□□□□ -1.67
RPN3	YER021W	TRM732	Q03496	1420 aa		4.6	□□□□□ -1.67
RPN3	YER021W	RSC6	P25632	483 aa		4.6	□□□□□ -1.67
RPN3	YER021W	XKS1	P42826	600 aa		4.6	□□□□□ -1.67
RPN3	YER021W	UTP5	Q04177	643 aa	Known RBP	4.6	□□□□□ -1.67
RPN3	YER021W	MED7	Q08278	222 aa		4.6	□□□□□ -1.67
RPN3	YER021W	YLL054C	Q12244	843 aa		4.6	□□□□□ -1.67
RPN3	YER021W	NTE1	Q04958	1679 aa		4.6	□□□□□ -1.67
RPN3	YER021W	HDA2	Q06629	674 aa		4.59	□□□□□ -1.67
RPN3	YER021W	TY1B-DR3	Q99231	1755 aa		4.58	□□□□□ -1.68
RPN3	YER021W	GCR1	P07261	785 aa		4.58	□□□□□ -1.68
RPN3	YER021W	PET112	P33893	541 aa		4.58	□□□□□ -1.68
RPN3	YER021W	SPO74	P45819	413 aa		4.58	□□□□□ -1.68
RPN3	YER021W	MTR4	P47047	1073 aa	Known RBP	4.58	□□□□□ -1.68
RPN3	YER021W	GNP1	P48813	663 aa		4.58	□□□□□ -1.68
RPN3	YER021W	DOT1	Q04089	582 aa	Known RBP	4.58	□□□□□ -1.68
RPN3	YER021W	SVF1	Q05515	481 aa		4.58	□□□□□ -1.68
RPN3	YER021W	YLR122C	Q12312	125 aa		4.58	□□□□□ -1.68
RPN3	YER021W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	RIP-Chip
RPN3	YER021W	YGR045C	P53229	120 aa		4.57	□□□□□ -1.68
RPN3	YER021W	AOS1	Q06624	347 aa		4.57	□□□□□ -1.68
RPN3	YER021W	MRL1	Q06815	381 aa		4.57	□□□□□ -1.68
RPN3	YER021W	SSN2	P38931	1420 aa		4.57	□□□□□ -1.68
RPN3	YER021W	MMS22	Q06164	1454 aa		4.57	□□□□□ -1.68
RPN3	YER021W	TAF13	P11747	167 aa		4.57	□□□□□ -1.68
RPN3	YER021W	COQ2	P32378	372 aa		4.57	□□□□□ -1.68
RPN3	YER021W	LIP5	P32875	414 aa		4.57	□□□□□ -1.68
RPN3	YER021W	KAE1	P36132	386 aa		4.57	□□□□□ -1.68
RPN3	YER021W	GPT2	P36148	743 aa		4.57	□□□□□ -1.68
RPN3	YER021W	TOS1	P38288	455 aa		4.57	□□□□□ -1.68
RPN3	YER021W	JIP5	Q06214	492 aa	Predicted RBP	4.57	□□□□□ -1.68
RPN3	YER021W	NUP159	P40477	1460 aa		4.56	□□□□□ -1.68
RPN3	YER021W	NAM7	P30771	971 aa	Known RBP	4.56	□□□□□ -1.68
RPN3	YER021W	DUT1	P33317	147 aa		4.56	□□□□□ -1.68
RPN3	YER021W	ADD66	P36040	267 aa		4.56	□□□□□ -1.68
RPN3	YER021W	AKR1	P39010	764 aa		4.56	□□□□□ -1.68
RPN3	YER021W	HXT13	P39924	564 aa		4.56	□□□□□ -1.68
RPN3	YER021W	HXT17	P53631	564 aa		4.56	□□□□□ -1.68
RPN3	YER021W	ELA1	P53861	379 aa	Predicted RBP	4.56	□□□□□ -1.68
RPN3	YER021W	HXT15	P54854	567 aa		4.56	□□□□□ -1.68
RPN3	YER021W	AVO1	Q08236	1176 aa		4.56	□□□□□ -1.68
RPN3	YER021W	DED1	P06634	604 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms