RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	PSO2	P30620	661 aa		4.72	□□□□□ -1.65
NUG1	YER006W	SLN1	P39928	1220 aa	Predicted RBP	4.72	□□□□□ -1.65
NUG1	YER006W	NDC80	P40460	691 aa		4.72	□□□□□ -1.65
NUG1	YER006W	HUL5	P53119	910 aa		4.72	□□□□□ -1.65
NUG1	YER006W	NDL1	Q06568	189 aa		4.72	□□□□□ -1.65
NUG1	YER006W	ARR1	Q06596	294 aa		4.72	□□□□□ -1.65
NUG1	YER006W	MLF3	P32047	452 aa		4.71	□□□□□ -1.66
NUG1	YER006W	SWH1	P35845	1188 aa		4.71	□□□□□ -1.66
NUG1	YER006W	MED8	P38304	223 aa		4.71	□□□□□ -1.66
NUG1	YER006W	ECM1	P39715	212 aa		4.71	□□□□□ -1.66
NUG1	YER006W	PXR1	P53335	271 aa	Predicted RBP	4.71	□□□□□ -1.66
NUG1	YER006W	YNL247W	P53852	767 aa	Known RBP	4.71	□□□□□ -1.66
NUG1	YER006W	JJJ1	P53863	590 aa		4.71	□□□□□ -1.66
NUG1	YER006W	BRE1	Q07457	700 aa	Known RBP	4.71	□□□□□ -1.66
NUG1	YER006W	NFI1	Q12216	726 aa		4.71	□□□□□ -1.66
NUG1	YER006W	CFT1	Q06632	1357 aa	Known RBP	4.71	□□□□□ -1.66
NUG1	YER006W	RAD2	P07276	1031 aa		4.7	□□□□□ -1.66
NUG1	YER006W	THR4	P16120	514 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	CLN1	P20437	546 aa		4.7	□□□□□ -1.66
NUG1	YER006W	SSA4	P22202	642 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	PHO87	P25360	923 aa		4.7	□□□□□ -1.66
NUG1	YER006W	SSF1	P38789	453 aa	Predicted RBP	4.7	□□□□□ -1.66
NUG1	YER006W	KTR7	P40504	517 aa		4.7	□□□□□ -1.66
NUG1	YER006W	ACS2	P52910	683 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	YNR029C	P53729	429 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	FAR11	P53917	953 aa		4.7	□□□□□ -1.66
NUG1	YER006W	RRB1	Q04225	511 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	PSK2	Q08217	1101 aa		4.7	□□□□□ -1.66
NUG1	YER006W	CLF1	Q12309	687 aa	Predicted RBP	4.7	□□□□□ -1.66
NUG1	YER006W	HAP4	P14064	554 aa		4.7	□□□□□ -1.66
NUG1	YER006W	GAL11	P19659	1081 aa		4.7	□□□□□ -1.66
NUG1	YER006W	RPL5	P26321	297 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	BMS1	Q08965	1183 aa	Known RBP	4.7	□□□□□ -1.66
NUG1	YER006W	RRP5	Q05022	1729 aa	Known RBP	4.69	□□□□□ -1.66
NUG1	YER006W	RAD3	P06839	778 aa		4.69	□□□□□ -1.66
NUG1	YER006W	SWI6	P09959	803 aa		4.69	□□□□□ -1.66
NUG1	YER006W	SBP1	P10080	294 aa	Known RBP	4.69	□□□□□ -1.66
NUG1	YER006W	YCK2	P23292	546 aa	Known RBP	4.69	□□□□□ -1.66
NUG1	YER006W	GCD6	P32501	712 aa	Known RBP	4.69	□□□□□ -1.66
NUG1	YER006W	MSC7	P38694	644 aa		4.69	□□□□□ -1.66
NUG1	YER006W	LAM1	P38851	1228 aa		4.69	□□□□□ -1.66
NUG1	YER006W	YJL181W	P46987	611 aa		4.69	□□□□□ -1.66
NUG1	YER006W	LYS4	P49367	693 aa	Predicted RBP	4.69	□□□□□ -1.66
NUG1	YER006W	YGL081W	P53156	320 aa		4.69	□□□□□ -1.66
NUG1	YER006W	BTN2	P53286	410 aa		4.69	□□□□□ -1.66
NUG1	YER006W	BRF1	P29056	596 aa		4.68	□□□□□ -1.66
NUG1	YER006W	PUP2	P32379	260 aa		4.68	□□□□□ -1.66
NUG1	YER006W	MAC1	P35192	417 aa		4.68	□□□□□ -1.66
NUG1	YER006W	VPS24	P36095	224 aa	Known RBP	4.68	□□□□□ -1.66
NUG1	YER006W	EXO84	P38261	753 aa		4.68	□□□□□ -1.66
NUG1	YER006W	TAF1	P46677	1066 aa		4.68	□□□□□ -1.66
NUG1	YER006W	MTO1	P53070	669 aa		4.68	□□□□□ -1.66
NUG1	YER006W	HOS2	P53096	452 aa	Predicted RBP	4.68	□□□□□ -1.66
NUG1	YER006W	GIR2	Q03768	265 aa	Predicted RBP	4.68	□□□□□ -1.66
NUG1	YER006W	HEL2	Q05580	639 aa	Known RBP	4.68	□□□□□ -1.66
NUG1	YER006W	UTP4	Q06679	776 aa	Known RBP	4.68	□□□□□ -1.66
NUG1	YER006W	GAS4	Q08271	471 aa		4.68	□□□□□ -1.66
NUG1	YER006W	SEC39	Q12745	709 aa		4.68	□□□□□ -1.66
NUG1	YER006W	MSM1	P22438	575 aa		4.67	□□□□□ -1.66
NUG1	YER006W	RPC37	P36121	282 aa		4.67	□□□□□ -1.66
NUG1	YER006W	TOM71	P38825	639 aa	Known RBP	4.67	□□□□□ -1.66
NUG1	YER006W	PET100	P38958	111 aa		4.67	□□□□□ -1.66
NUG1	YER006W	RSC1	P53236	928 aa		4.67	□□□□□ -1.66
NUG1	YER006W	RIA1	P53893	1110 aa		4.67	□□□□□ -1.66
NUG1	YER006W	YNL050C	P53952	270 aa		4.67	□□□□□ -1.66
NUG1	YER006W	HEH2	Q03281	663 aa		4.67	□□□□□ -1.66
NUG1	YER006W	YPR172W	Q06608	200 aa		4.67	□□□□□ -1.66
NUG1	YER006W	YDR215C	Q12240	137 aa		4.67	□□□□□ -1.66
NUG1	YER006W	NOP14	Q99207	810 aa	Known RBP	4.67	□□□□□ -1.66
NUG1	YER006W	SAC3	P46674	1301 aa		4.67	□□□□□ -1.66
NUG1	YER006W	CDC3	P32457	520 aa	Known RBP	4.66	□□□□□ -1.66
NUG1	YER006W	TIF3	P34167	436 aa	Known RBP	4.66	□□□□□ -1.66
NUG1	YER006W	CCM1	P48237	864 aa	Predicted RBP	4.66	□□□□□ -1.66
NUG1	YER006W	GDE1	Q02979	1223 aa		4.66	□□□□□ -1.66
NUG1	YER006W	RAD50	P12753	1312 aa		4.66	□□□□□ -1.66
NUG1	YER006W	RAD9	P14737	1309 aa		4.66	□□□□□ -1.66
NUG1	YER006W	GAL2	P13181	574 aa		4.65	□□□□□ -1.66
NUG1	YER006W	NGR1	P32831	672 aa	Known RBP	4.65	□□□□□ -1.66
NUG1	YER006W	SCD5	P34758	872 aa		4.65	□□□□□ -1.66
NUG1	YER006W	ARL1	P38116	183 aa	Known RBP	4.65	□□□□□ -1.66
NUG1	YER006W	CIN4	P39110	191 aa		4.65	□□□□□ -1.66
NUG1	YER006W	NPR2	P39923	615 aa		4.65	□□□□□ -1.66
NUG1	YER006W	RIO2	P40160	425 aa	Known RBP	4.65	□□□□□ -1.66
NUG1	YER006W	YIR014W	P40570	242 aa		4.65	□□□□□ -1.66
NUG1	YER006W	RRP9	Q06506	573 aa	Known RBP	4.65	□□□□□ -1.66
NUG1	YER006W	NOC3	Q07896	663 aa	Predicted RBP	4.65	□□□□□ -1.66
NUG1	YER006W	BRR1	Q99177	341 aa	Predicted RBP	4.65	□□□□□ -1.66
NUG1	YER006W	KAP122	P32767	1081 aa		4.65	□□□□□ -1.67
NUG1	YER006W	MFT1	P33441	392 aa	Known RBP	4.65	□□□□□ -1.67
NUG1	YER006W	BLI1	P35727	113 aa		4.65	□□□□□ -1.67
NUG1	YER006W	MPE1	P35728	441 aa	Known RBP	4.65	□□□□□ -1.67
NUG1	YER006W	SPC42	P36094	363 aa		4.65	□□□□□ -1.67
NUG1	YER006W	TAT1	P38085	619 aa		4.65	□□□□□ -1.67
NUG1	YER006W	CTH1	P47976	325 aa		4.65	□□□□□ -1.67
NUG1	YER006W	SHE4	P51534	789 aa		4.65	□□□□□ -1.67
NUG1	YER006W	SKP1	P52286	194 aa		4.65	□□□□□ -1.67
NUG1	YER006W	PRP43	P53131	767 aa	Known RBP	4.65	□□□□□ -1.67
NUG1	YER006W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
NUG1	YER006W	DUS1	P53759	423 aa	Known RBP	4.65	□□□□□ -1.67
NUG1	YER006W	BNI5	P53890	448 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms