RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene SLD5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD5	YDR489W	TY1A-PL	P0CX73	440 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-JR1	P0CX74	440 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-LR3	P0CX75	440 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-ML2	P0CX76	440 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	NAP1	P25293	417 aa	Known RBP	4.66	□□□□□ -1.66
SLD5	YDR489W	WHI3	P34761	661 aa	Known RBP	4.66	□□□□□ -1.66
SLD5	YDR489W	PEX28	P38848	579 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	YGL140C	P53120	1219 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	JIP5	Q06214	492 aa	Predicted RBP	4.66	□□□□□ -1.66
SLD5	YDR489W	CDA2	Q06703	312 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	YIG1	Q08956	461 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-GR1	Q12085	440 aa		4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.66	□□□□□ -1.66
SLD5	YDR489W	TY1A-OL	Q92392	440 aa	Known RBP	4.66	□□□□□ -1.66
SLD5	YDR489W	PEP7	P32609	515 aa		4.65	□□□□□ -1.67
SLD5	YDR489W	TSA1	P34760	196 aa	Known RBP	4.65	□□□□□ -1.67
SLD5	YDR489W	CIT3	P43635	486 aa		4.65	□□□□□ -1.67
SLD5	YDR489W	FAR11	P53917	953 aa		4.65	□□□□□ -1.67
SLD5	YDR489W	TAF13	P11747	167 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	CDC34	P14682	295 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	MSH3	P25336	1018 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	HSP78	P33416	811 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	PET112	P33893	541 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	NEM1	P38757	446 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	HXT13	P39924	564 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	HXT17	P53631	564 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	HXT15	P54854	567 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	GIS1	Q03833	894 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	YMR074C	Q04773	145 aa		4.64	□□□□□ -1.67
SLD5	YDR489W	GCR1	P07261	785 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	CLN2	P20438	545 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	THI80	P35202	319 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	SHU2	P38957	223 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	XKS1	P42826	600 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	RSM26	P47141	266 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	RCM1	P53972	490 aa		4.63	□□□□□ -1.67
SLD5	YDR489W	SQT1	P35184	431 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	GPT2	P36148	743 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	ARL1	P38116	183 aa	Known RBP	4.62	□□□□□ -1.67
SLD5	YDR489W	OCA5	P38738	679 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	ENT3	P47160	408 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	UTP22	P53254	1237 aa	Predicted RBP	4.62	□□□□□ -1.67
SLD5	YDR489W	ALD6	P54115	500 aa	Known RBP	4.62	□□□□□ -1.67
SLD5	YDR489W	HDA2	Q06629	674 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	YOR223W	Q12015	292 aa		4.62	□□□□□ -1.67
SLD5	YDR489W	GCV1	P48015	400 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	SIW14	P53965	281 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	PEX13	P80667	386 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	MEC3	Q02574	474 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	EEB1	Q02891	456 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	UTP5	Q04177	643 aa	Known RBP	4.61	□□□□□ -1.67
SLD5	YDR489W	YOR059C	Q08448	450 aa	Known RBP	4.61	□□□□□ -1.67
SLD5	YDR489W	RTT10	Q08924	1013 aa		4.61	□□□□□ -1.67
SLD5	YDR489W	VMA4	P22203	233 aa	Known RBP	4.6	□□□□□ -1.67
SLD5	YDR489W	MAD1	P40957	749 aa		4.6	□□□□□ -1.67
SLD5	YDR489W	SLS1	P42900	643 aa		4.6	□□□□□ -1.67
SLD5	YDR489W	FAA4	P47912	694 aa	Known RBP	4.6	□□□□□ -1.67
SLD5	YDR489W	YGR053C	P53234	283 aa		4.6	□□□□□ -1.67
SLD5	YDR489W	SSF2	Q12153	453 aa	Predicted RBP	4.6	□□□□□ -1.67
SLD5	YDR489W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SLD5	YDR489W	OYE3	P41816	400 aa	Predicted RBP	4.59	□□□□□ -1.67
SLD5	YDR489W	MRL1	Q06815	381 aa		4.59	□□□□□ -1.67
SLD5	YDR489W	YLL054C	Q12244	843 aa		4.59	□□□□□ -1.67
SLD5	YDR489W	YKL077W	P36081	392 aa		4.58	□□□□□ -1.68
SLD5	YDR489W	TAT2	P38967	592 aa		4.58	□□□□□ -1.68
SLD5	YDR489W	VAC8	P39968	578 aa		4.58	□□□□□ -1.68
SLD5	YDR489W	RKM2	Q03942	479 aa		4.58	□□□□□ -1.68
SLD5	YDR489W	ADP1	P25371	1049 aa		4.57	□□□□□ -1.68
SLD5	YDR489W	AFG2	P32794	780 aa		4.57	□□□□□ -1.68
SLD5	YDR489W	FLR1	P38124	548 aa		4.57	□□□□□ -1.68
SLD5	YDR489W	MTR4	P47047	1073 aa	Known RBP	4.57	□□□□□ -1.68
SLD5	YDR489W	ROD1	Q02805	837 aa		4.57	□□□□□ -1.68
SLD5	YDR489W	DOT1	Q04089	582 aa	Known RBP	4.57	□□□□□ -1.68
SLD5	YDR489W	PRP6	P19735	899 aa	Predicted RBP	4.56	□□□□□ -1.68
SLD5	YDR489W	RER2	P35196	286 aa		4.56	□□□□□ -1.68
SLD5	YDR489W	NNF1	P47149	201 aa		4.56	□□□□□ -1.68
SLD5	YDR489W	GDE1	Q02979	1223 aa		4.56	□□□□□ -1.68
SLD5	YDR489W	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
SLD5	YDR489W	TMA46	Q12000	345 aa	Known RBP	4.56	□□□□□ -1.68
SLD5	YDR489W	YTA7	P40340	1379 aa		4.55	□□□□□ -1.68
SLD5	YDR489W	TRP2	P00899	507 aa	Known RBP	4.55	□□□□□ -1.68
SLD5	YDR489W	LYP1	P32487	611 aa		4.55	□□□□□ -1.68
SLD5	YDR489W	MKK2	P32491	506 aa		4.55	□□□□□ -1.68
SLD5	YDR489W	ADD66	P36040	267 aa		4.55	□□□□□ -1.68
SLD5	YDR489W	REI1	P38344	393 aa	Predicted RBP	4.55	□□□□□ -1.68
SLD5	YDR489W	ORC3	P54790	616 aa		4.55	□□□□□ -1.68
SLD5	YDR489W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SLD5	YDR489W	ALG6	Q12001	544 aa	Known RBP	4.55	□□□□□ -1.68
SLD5	YDR489W	YKL069W	P36088	180 aa		4.54	□□□□□ -1.68
SLD5	YDR489W	RAT1	Q02792	1006 aa	Known RBP	4.54	□□□□□ -1.68
SLD5	YDR489W	SSY1	Q03770	852 aa		4.54	□□□□□ -1.68
SLD5	YDR489W	OPI10	Q08202	246 aa		4.54	□□□□□ -1.68
SLD5	YDR489W	AVO1	Q08236	1176 aa		4.54	□□□□□ -1.68
SLD5	YDR489W	RPS4A	P0CX35	261 aa	Known RBP	4.53	□□□□□ -1.68
SLD5	YDR489W	RPS4B	P0CX36	261 aa	Known RBP	4.53	□□□□□ -1.68
SLD5	YDR489W	DBP5	P20449	482 aa	Known RBP	4.53	□□□□□ -1.68
SLD5	YDR489W	ATG14	P38270	344 aa		4.53	□□□□□ -1.68
SLD5	YDR489W	SPF1	P39986	1215 aa	Known RBP	4.53	□□□□□ -1.68
SLD5	YDR489W	YJL049W	P47048	450 aa		4.53	□□□□□ -1.68
SLD5	YDR489W	YGR045C	P53229	120 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms