RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C YGL140CP53120 1219 aa6.93□□□□□ -1.3
VPS72YDR485C UTP4Q06679 776 aaKnown RBP6.93□□□□□ -1.3
VPS72YDR485C WSC3Q12215 556 aa6.93□□□□□ -1.3
VPS72YDR485C Q0182Q9ZZW1 134 aa6.93□□□□□ -1.3
VPS72YDR485C FOB1O13329 566 aa6.92□□□□□ -1.3
VPS72YDR485C UTP7P40055 554 aaKnown RBP6.92□□□□□ -1.3
VPS72YDR485C YFR016CP43597 1233 aaKnown RBP6.92□□□□□ -1.3
VPS72YDR485C MTQ2Q03920 221 aaPredicted RBP6.92□□□□□ -1.3
VPS72YDR485C YDR344CQ05510 147 aa6.92□□□□□ -1.3
VPS72YDR485C CMR1Q12510 522 aaKnown RBP6.92□□□□□ -1.3
VPS72YDR485C HBN1Q96VH4 193 aa6.92□□□□□ -1.3
VPS72YDR485C STE6P12866 1290 aa6.91□□□□□ -1.3
VPS72YDR485C SEC23P15303 768 aaKnown RBP6.91□□□□□ -1.3
VPS72YDR485C HBS1P32769 611 aaKnown RBP6.91□□□□□ -1.3
VPS72YDR485C BSD2P38356 321 aa6.91□□□□□ -1.3
VPS72YDR485C GEM1P39722 662 aa6.91□□□□□ -1.3
VPS72YDR485C DAL5P15365 543 aa6.91□□□□□ -1.3
VPS72YDR485C RPS0AP32905 252 aaKnown RBP6.91□□□□□ -1.3
VPS72YDR485C FIR1P40020 876 aa6.91□□□□□ -1.3
VPS72YDR485C SAP155P43612 1002 aa6.91□□□□□ -1.3
VPS72YDR485C YPL066WQ12194 479 aa6.91□□□□□ -1.3
VPS72YDR485C MOT2P34909 587 aaKnown RBP6.9□□□□□ -1.3
VPS72YDR485C TBS1P38114 1094 aa6.9□□□□□ -1.3
VPS72YDR485C CCC2P38995 1004 aa6.9□□□□□ -1.3
VPS72YDR485C MTR4P47047 1073 aaKnown RBP6.9□□□□□ -1.3
VPS72YDR485C PRT1P06103 763 aaKnown RBP6.9□□□□□ -1.31
VPS72YDR485C MLF3P32047 452 aa6.9□□□□□ -1.31
VPS72YDR485C BLI1P35727 113 aa6.9□□□□□ -1.31
VPS72YDR485C XDJ1P39102 459 aa6.9□□□□□ -1.31
VPS72YDR485C RVS167P39743 482 aaKnown RBP6.9□□□□□ -1.31
VPS72YDR485C SUM1P46676 1062 aa6.9□□□□□ -1.31
VPS72YDR485C YDL124WQ07551 312 aaKnown RBP6.9□□□□□ -1.31
VPS72YDR485C TRE2Q08693 809 aa6.9□□□□□ -1.31
VPS72YDR485C RTP1Q12751 981 aa6.9□□□□□ -1.31
VPS72YDR485C SSH4P32343 579 aa6.89□□□□□ -1.31
VPS72YDR485C MBP1P39678 833 aa6.89□□□□□ -1.31
VPS72YDR485C RSC8P43609 557 aaKnown RBP6.89□□□□□ -1.31
VPS72YDR485C HAP5Q02516 242 aa6.89□□□□□ -1.31
VPS72YDR485C YML131WQ03102 365 aa6.89□□□□□ -1.31
VPS72YDR485C EMG1Q06287 252 aaKnown RBP6.89□□□□□ -1.31
VPS72YDR485C RRP6Q12149 733 aaKnown RBP6.89□□□□□ -1.31
VPS72YDR485C VBA3P25594 458 aa6.89□□□□□ -1.31
VPS72YDR485C PEX28P38848 579 aa6.89□□□□□ -1.31
VPS72YDR485C BNA1P47096 177 aa6.89□□□□□ -1.31
VPS72YDR485C SIW14P53965 281 aa6.89□□□□□ -1.31
VPS72YDR485C OPI1P21957 404 aa6.88□□□□□ -1.31
VPS72YDR485C FAF1P40546 346 aaPredicted RBP6.88□□□□□ -1.31
VPS72YDR485C PTP2P29461 750 aa6.88□□□□□ -1.31
VPS72YDR485C MRS6P32864 603 aaKnown RBP6.88□□□□□ -1.31
VPS72YDR485C RDH54P38086 958 aa6.88□□□□□ -1.31
VPS72YDR485C PRP5P21372 849 aaPredicted RBP6.87□□□□□ -1.31
VPS72YDR485C YHL041WP38730 149 aa6.87□□□□□ -1.31
VPS72YDR485C HSE1P38753 452 aa6.87□□□□□ -1.31
VPS72YDR485C NDE1P40215 560 aa6.87□□□□□ -1.31
VPS72YDR485C HFD1Q04458 532 aa6.87□□□□□ -1.31
VPS72YDR485C RPC31P17890 251 aa6.87□□□□□ -1.31
VPS72YDR485C PYC2P32327 1180 aaKnown RBP6.87□□□□□ -1.31
VPS72YDR485C DBF20P32328 564 aa6.87□□□□□ -1.31
VPS72YDR485C MKS1P34072 584 aa6.87□□□□□ -1.31
VPS72YDR485C DSS1P39112 969 aa6.87□□□□□ -1.31
VPS72YDR485C MET13P53128 600 aa6.87□□□□□ -1.31
VPS72YDR485C NOG1Q02892 647 aaKnown RBP6.87□□□□□ -1.31
VPS72YDR485C IOC2Q12072 812 aa6.87□□□□□ -1.31
VPS72YDR485C KTR4P38131 464 aa6.86□□□□□ -1.31
VPS72YDR485C RPS0BP46654 252 aaKnown RBP6.86□□□□□ -1.31
VPS72YDR485C RSM26P47141 266 aa6.86□□□□□ -1.31
VPS72YDR485C RPS31P05759 152 aaKnown RBP6.86□□□□□ -1.31
VPS72YDR485C INO1P11986 533 aa6.86□□□□□ -1.31
VPS72YDR485C PRP9P19736 530 aaKnown RBP6.86□□□□□ -1.31
VPS72YDR485C PCL2P25693 308 aa6.86□□□□□ -1.31
VPS72YDR485C NIC96P34077 839 aa6.86□□□□□ -1.31
VPS72YDR485C GIP1P38229 639 aa6.86□□□□□ -1.31
VPS72YDR485C PAN5P38787 379 aa6.86□□□□□ -1.31
VPS72YDR485C ROD1Q02805 837 aa6.86□□□□□ -1.31
VPS72YDR485C TIF35Q04067 274 aaKnown RBP6.86□□□□□ -1.31
VPS72YDR485C ALA1P40825 983 aaKnown RBP6.85□□□□□ -1.31
VPS72YDR485C PBP1P53297 722 aaKnown RBP6.85□□□□□ -1.31
VPS72YDR485C GPP2P40106 250 aaKnown RBP6.84□□□□□ -1.31
VPS72YDR485C UBA2P52488 636 aa6.84□□□□□ -1.31
VPS72YDR485C CWC22P53333 577 aaKnown RBP6.84□□□□□ -1.31
VPS72YDR485C YNL035CP53962 389 aaKnown RBP6.84□□□□□ -1.31
VPS72YDR485C REH1Q06709 432 aa6.84□□□□□ -1.31
VPS72YDR485C SSP2Q08646 371 aa6.84□□□□□ -1.31
VPS72YDR485C INH1P01097 85 aa6.84□□□□□ -1.31
VPS72YDR485C CDC9P04819 755 aa6.84□□□□□ -1.31
VPS72YDR485C PAT1P25644 796 aaKnown RBP6.84□□□□□ -1.31
VPS72YDR485C MRF1P30775 413 aaPredicted RBP6.84□□□□□ -1.31
VPS72YDR485C SQT1P35184 431 aa6.84□□□□□ -1.31
VPS72YDR485C RKM3P38222 552 aa6.84□□□□□ -1.31
VPS72YDR485C RIM11P38615 370 aa6.84□□□□□ -1.31
VPS72YDR485C NIT2P47016 307 aa6.84□□□□□ -1.31
VPS72YDR485C FRK1Q03002 865 aaPredicted RBP6.84□□□□□ -1.31
VPS72YDR485C YOR296WQ08748 1289 aa6.84□□□□□ -1.31
VPS72YDR485C TAF13P11747 167 aa6.83□□□□□ -1.32
VPS72YDR485C MSH3P25336 1018 aa6.83□□□□□ -1.32
VPS72YDR485C AIM46P38885 310 aa6.83□□□□□ -1.32
VPS72YDR485C UBP6P43593 499 aaKnown RBP6.83□□□□□ -1.32
VPS72YDR485C ULI1P43604 169 aa6.83□□□□□ -1.32
VPS72YDR485C PEX13P80667 386 aa6.83□□□□□ -1.32
VPS72YDR485C MEH1Q02205 184 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms