RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C ABZ1P37254 787 aaPredicted RBP4.74□□□□□ -1.65
CDC40YDR364C ETP1P38748 585 aaKnown RBP4.74□□□□□ -1.65
CDC40YDR364C YAF9P53930 226 aa4.74□□□□□ -1.65
CDC40YDR364C PMT7Q06644 662 aa4.74□□□□□ -1.65
CDC40YDR364C FLP1P03870 423 aa4.73□□□□□ -1.65
CDC40YDR364C RPS13P05756 151 aaKnown RBP4.73□□□□□ -1.65
CDC40YDR364C TY1A-LR4P0C2I8 440 aaKnown RBP4.73□□□□□ -1.65
CDC40YDR364C TY1A-DR6P0CX70 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-ER1P0CX71 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-LR2P0CX72 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-PLP0CX73 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-JR1P0CX74 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-LR3P0CX75 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-ML2P0CX76 440 aa4.73□□□□□ -1.65
CDC40YDR364C NAP1P25293 417 aaKnown RBP4.73□□□□□ -1.65
CDC40YDR364C PAN1P32521 1480 aa4.73□□□□□ -1.65
CDC40YDR364C NUT1P53114 1132 aa4.73□□□□□ -1.65
CDC40YDR364C YNL011CP53980 444 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-GR1Q12085 440 aa4.73□□□□□ -1.65
CDC40YDR364C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.73□□□□□ -1.65
CDC40YDR364C TY1A-OLQ92392 440 aaKnown RBP4.73□□□□□ -1.65
CDC40YDR364C TAD3Q9URQ3 322 aa4.73□□□□□ -1.65
CDC40YDR364C TSC11P40061 1430 aa4.72□□□□□ -1.65
CDC40YDR364C SNO2P53823 222 aa4.72□□□□□ -1.65
CDC40YDR364C CLU1Q03690 1277 aaKnown RBP4.72□□□□□ -1.65
CDC40YDR364C SNQ2P32568 1501 aaKnown RBP4.71□□□□□ -1.65
CDC40YDR364C YLR358CO13565 187 aa4.71□□□□□ -1.66
CDC40YDR364C SAM35P14693 329 aa4.71□□□□□ -1.66
CDC40YDR364C MET10P39692 1035 aa4.71□□□□□ -1.66
CDC40YDR364C TPP1Q03796 238 aa4.71□□□□□ -1.66
CDC40YDR364C TRM732Q03496 1420 aa4.7□□□□□ -1.66
CDC40YDR364C STH1P32597 1359 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-LR1P0C2J3 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-FP0CX63 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-GR2P0CX64 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-CP25384 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-DR2Q03494 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY1B-DR1Q03855 1755 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-DR3Q07791 1770 aaKnown RBP4.7□□□□□ -1.66
CDC40YDR364C TY2B-OR1Q12113 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-DR1Q12472 1770 aa4.7□□□□□ -1.66
CDC40YDR364C TY2B-OR2Q12501 1770 aa4.7□□□□□ -1.66
CDC40YDR364C PRE10P21242 288 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
CDC40YDR364C YKL077WP36081 392 aa4.7□□□□□ -1.66
CDC40YDR364C GLO3P38682 493 aaKnown RBP4.7□□□□□ -1.66
CDC40YDR364C QDR1P40475 563 aa4.7□□□□□ -1.66
CDC40YDR364C FOL2P51601 243 aaKnown RBP4.7□□□□□ -1.66
CDC40YDR364C MNL2Q12205 849 aa4.7□□□□□ -1.66
CDC40YDR364C HAT1Q12341 374 aa4.7□□□□□ -1.66
CDC40YDR364C VTH1P40438 1549 aa4.7□□□□□ -1.66
CDC40YDR364C VTH2P40890 1549 aa4.7□□□□□ -1.66
CDC40YDR364C MDL2P33311 773 aa4.69□□□□□ -1.66
CDC40YDR364C SHM2P37291 469 aaKnown RBP4.69□□□□□ -1.66
CDC40YDR364C SLS1P42900 643 aa4.69□□□□□ -1.66
CDC40YDR364C BSC2Q05611 235 aa4.69□□□□□ -1.66
CDC40YDR364C MCM5P29496 775 aaKnown RBP4.68□□□□□ -1.66
CDC40YDR364C YPT53P36019 220 aa4.68□□□□□ -1.66
CDC40YDR364C EXO5P38289 585 aa4.68□□□□□ -1.66
CDC40YDR364C YHL012WP38709 493 aa4.68□□□□□ -1.66
CDC40YDR364C SSF1P38789 453 aaPredicted RBP4.68□□□□□ -1.66
CDC40YDR364C RVS167P39743 482 aaKnown RBP4.68□□□□□ -1.66
CDC40YDR364C IOC4Q04213 475 aa4.68□□□□□ -1.66
CDC40YDR364C DNF1P32660 1571 aa4.68□□□□□ -1.66
CDC40YDR364C TUB2P02557 457 aaKnown RBP4.67□□□□□ -1.66
CDC40YDR364C RET1P22276 1149 aaKnown RBP4.67□□□□□ -1.66
CDC40YDR364C HEM3P28789 327 aa4.67□□□□□ -1.66
CDC40YDR364C ACF4P47129 309 aa4.67□□□□□ -1.66
CDC40YDR364C CDC55Q00362 526 aa4.67□□□□□ -1.66
CDC40YDR364C CTS1P29029 562 aa4.66□□□□□ -1.66
CDC40YDR364C ATG1P53104 897 aa4.66□□□□□ -1.66
CDC40YDR364C TRS120Q04183 1289 aa4.66□□□□□ -1.66
CDC40YDR364C YLR257WQ06146 321 aaKnown RBP4.66□□□□□ -1.66
CDC40YDR364C PNS1Q12412 539 aa4.66□□□□□ -1.66
CDC40YDR364C TY1B-DR3Q99231 1755 aa4.66□□□□□ -1.66
CDC40YDR364C SRO9P25567 434 aaKnown RBP4.65□□□□□ -1.66
CDC40YDR364C NEM1P38757 446 aa4.65□□□□□ -1.66
CDC40YDR364C SHU2P38957 223 aa4.65□□□□□ -1.66
CDC40YDR364C YAR028WP39548 234 aa4.65□□□□□ -1.66
CDC40YDR364C PDR15Q04182 1529 aaKnown RBP4.65□□□□□ -1.66
CDC40YDR364C TY2B-BQ12491 1770 aa4.65□□□□□ -1.67
CDC40YDR364C SEN54Q02825 467 aaPredicted RBP4.65□□□□□ -1.67
CDC40YDR364C YDR132CQ03900 495 aa4.65□□□□□ -1.67
CDC40YDR364C KAR5Q04746 504 aa4.65□□□□□ -1.67
CDC40YDR364C SNT2P53127 1403 aa4.64□□□□□ -1.67
CDC40YDR364C ENV11P53246 860 aa4.64□□□□□ -1.67
CDC40YDR364C NOG1Q02892 647 aaKnown RBP4.64□□□□□ -1.67
CDC40YDR364C TY1B-BRQ12193 1756 aa4.64□□□□□ -1.67
CDC40YDR364C TY1B-GR3Q12316 1755 aa4.64□□□□□ -1.67
CDC40YDR364C TY1B-ORQ92393 1755 aa4.64□□□□□ -1.67
CDC40YDR364C PAM1P37304 830 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C NMD3P38861 518 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C TAT2P38967 592 aa4.63□□□□□ -1.67
CDC40YDR364C MTR4P47047 1073 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C RSA3Q05942 220 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C INP54Q08227 384 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C HRK1Q08732 759 aaKnown RBP4.63□□□□□ -1.67
CDC40YDR364C NUP159P40477 1460 aa4.62□□□□□ -1.67
CDC40YDR364C TY1B-HO13535 1793 aa4.62□□□□□ -1.67
CDC40YDR364C TY1B-DR5P0C2I2 1755 aa4.62□□□□□ -1.67
CDC40YDR364C TY1B-DR6P0C2I3 1755 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms