RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeastyeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC2YDR081C YOL098CQ12496 1037 aa3.7□□□□□ -1.82
PDC2YDR081C SSK2P53599 1579 aa3.7□□□□□ -1.82
PDC2YDR081C NEM1P38757 446 aa3.69□□□□□ -1.82
PDC2YDR081C NEO1P40527 1151 aa3.69□□□□□ -1.82
PDC2YDR081C YIG1Q08956 461 aa3.69□□□□□ -1.82
PDC2YDR081C REV3P14284 1504 aa3.69□□□□□ -1.82
PDC2YDR081C GIP2P40036 548 aa3.69□□□□□ -1.82
PDC2YDR081C SLS1P42900 643 aa3.69□□□□□ -1.82
PDC2YDR081C CWC24P53769 259 aa3.69□□□□□ -1.82
PDC2YDR081C PRI2P20457 528 aa3.68□□□□□ -1.82
PDC2YDR081C PAN5P38787 379 aa3.68□□□□□ -1.82
PDC2YDR081C FPR3P38911 411 aaKnown RBP3.68□□□□□ -1.82
PDC2YDR081C TED1P40533 473 aa3.68□□□□□ -1.82
PDC2YDR081C YGR035CP53222 116 aa3.68□□□□□ -1.82
PDC2YDR081C PGM2P37012 569 aaKnown RBP3.68□□□□□ -1.82
PDC2YDR081C POL5P39985 1022 aaKnown RBP3.68□□□□□ -1.82
PDC2YDR081C UTP22P53254 1237 aaPredicted RBP3.68□□□□□ -1.82
PDC2YDR081C SIW14P53965 281 aa3.68□□□□□ -1.82
PDC2YDR081C ROD1Q02805 837 aa3.68□□□□□ -1.82
PDC2YDR081C YOL057WQ08225 711 aa3.68□□□□□ -1.82
PDC2YDR081C SSB1P11484 613 aaKnown RBP3.68□□□□□ -1.82
PDC2YDR081C RER2P35196 286 aa3.68□□□□□ -1.82
PDC2YDR081C SSB2P40150 613 aaKnown RBP3.68□□□□□ -1.82
PDC2YDR081C OPI10Q08202 246 aa3.68□□□□□ -1.82
PDC2YDR081C SHU2P38957 223 aa3.67□□□□□ -1.82
PDC2YDR081C UTP5Q04177 643 aaKnown RBP3.67□□□□□ -1.82
PDC2YDR081C ESC2Q06340 456 aa3.67□□□□□ -1.82
PDC2YDR081C YDL121CQ07541 149 aa3.67□□□□□ -1.82
PDC2YDR081C WRS1Q12109 432 aaKnown RBP3.67□□□□□ -1.82
PDC2YDR081C TAF13P11747 167 aa3.67□□□□□ -1.82
PDC2YDR081C VMA4P22203 233 aaKnown RBP3.67□□□□□ -1.82
PDC2YDR081C GRX1P25373 110 aaKnown RBP3.67□□□□□ -1.82
PDC2YDR081C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
PDC2YDR081C ECM16Q04217 1267 aaKnown RBP3.67□□□□□ -1.82
PDC2YDR081C TRP2P00899 507 aaKnown RBP3.66□□□□□ -1.82
PDC2YDR081C ERS1P17261 260 aa3.66□□□□□ -1.82
PDC2YDR081C EBP2P36049 427 aaKnown RBP3.66□□□□□ -1.82
PDC2YDR081C YKL077WP36081 392 aa3.66□□□□□ -1.82
PDC2YDR081C ALG14P38242 237 aa3.66□□□□□ -1.82
PDC2YDR081C ERP2P39704 215 aa3.66□□□□□ -1.82
PDC2YDR081C SPF1P39986 1215 aaKnown RBP3.66□□□□□ -1.82
PDC2YDR081C LEM3P42838 414 aa3.66□□□□□ -1.82
PDC2YDR081C TY4B-PA0A0B7P3V8 1104 aa3.66□□□□□ -1.82
PDC2YDR081C MPE1P35728 441 aaKnown RBP3.66□□□□□ -1.82
PDC2YDR081C BOI2P39969 1040 aa3.66□□□□□ -1.82
PDC2YDR081C GIR2Q03768 265 aaPredicted RBP3.66□□□□□ -1.82
PDC2YDR081C SPO71Q03868 1245 aa3.66□□□□□ -1.82
PDC2YDR081C TMA46Q12000 345 aaKnown RBP3.66□□□□□ -1.82
PDC2YDR081C SLP1Q12232 587 aa3.66□□□□□ -1.82
PDC2YDR081C TY4A-HQ6Q5P6 413 aa3.66□□□□□ -1.82
PDC2YDR081C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82 RIP-Chip
PDC2YDR081C MKK2P32491 506 aa3.65□□□□□ -1.82
PDC2YDR081C SRP40P32583 406 aaPredicted RBP3.65□□□□□ -1.82
PDC2YDR081C AFG2P32794 780 aa3.65□□□□□ -1.82
PDC2YDR081C SEA4P38164 1038 aa3.65□□□□□ -1.82
PDC2YDR081C RAT1Q02792 1006 aaKnown RBP3.65□□□□□ -1.82
PDC2YDR081C RLP24Q07915 199 aaKnown RBP3.65□□□□□ -1.82
PDC2YDR081C FAL1Q12099 399 aaKnown RBP3.65□□□□□ -1.82
PDC2YDR081C DPH6Q12429 685 aa3.65□□□□□ -1.82
PDC2YDR081C DED1P06634 604 aaKnown RBP3.65□□□□□ -1.83
PDC2YDR081C CIT2P08679 460 aa3.65□□□□□ -1.83
PDC2YDR081C RPS0AP32905 252 aaKnown RBP3.65□□□□□ -1.83
PDC2YDR081C NOP2P40991 618 aaKnown RBP3.65□□□□□ -1.83
PDC2YDR081C TYW3P53177 273 aa3.65□□□□□ -1.83
PDC2YDR081C ALG12P53730 551 aa3.65□□□□□ -1.83
PDC2YDR081C MEC3Q02574 474 aa3.65□□□□□ -1.83
PDC2YDR081C NSE3Q05541 303 aa3.65□□□□□ -1.83
PDC2YDR081C EST2Q06163 884 aa3.65□□□□□ -1.83
PDC2YDR081C BAS1P22035 811 aa3.64□□□□□ -1.83
PDC2YDR081C STE5P32917 917 aa3.64□□□□□ -1.83
PDC2YDR081C SPO74P45819 413 aa3.64□□□□□ -1.83
PDC2YDR081C GCV1P48015 400 aa3.64□□□□□ -1.83
PDC2YDR081C TMA64Q04600 565 aaKnown RBP3.64□□□□□ -1.83
PDC2YDR081C BDF2Q07442 638 aa3.64□□□□□ -1.83
PDC2YDR081C ABD1P32783 436 aaPredicted RBP3.64□□□□□ -1.83
PDC2YDR081C ENT3P47160 408 aa3.64□□□□□ -1.83
PDC2YDR081C TDA5Q06417 326 aaKnown RBP3.64□□□□□ -1.83
PDC2YDR081C ALG6Q12001 544 aaKnown RBP3.64□□□□□ -1.83
PDC2YDR081C ELG1Q12050 791 aa3.64□□□□□ -1.83
PDC2YDR081C HIR3P47171 1648 aa3.64□□□□□ -1.83
PDC2YDR081C KAR1P11927 433 aa3.63□□□□□ -1.83
PDC2YDR081C RAD27P26793 382 aa3.63□□□□□ -1.83
PDC2YDR081C LYP1P32487 611 aa3.63□□□□□ -1.83
PDC2YDR081C GRX4P32642 244 aa3.63□□□□□ -1.83
PDC2YDR081C ADD66P36040 267 aa3.63□□□□□ -1.83
PDC2YDR081C ARL1P38116 183 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C YJL049WP47048 450 aa3.63□□□□□ -1.83
PDC2YDR081C MTC5Q03897 1148 aa3.63□□□□□ -1.83
PDC2YDR081C TIF35Q04067 274 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C YPL066WQ12194 479 aa3.63□□□□□ -1.83
PDC2YDR081C NHA1Q99271 985 aa3.63□□□□□ -1.83
PDC2YDR081C MOT2P34909 587 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C MDJ1P35191 511 aa3.63□□□□□ -1.83
PDC2YDR081C NOC2P39744 710 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C SBE2P42223 864 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C MTR4P47047 1073 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C MPP10P47083 593 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C YLR225CQ05948 407 aaKnown RBP3.63□□□□□ -1.83
PDC2YDR081C RAD4P14736 754 aa3.63□□□□□ -1.83
PDC2YDR081C YKL091CP33324 310 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms