RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C MSH3P25336 1018 aa5.56□□□□□ -1.52
SHU2YDR078C ELM1P32801 640 aa5.56□□□□□ -1.52
SHU2YDR078C PPG1P32838 368 aa5.56□□□□□ -1.52
SHU2YDR078C YKL069WP36088 180 aa5.56□□□□□ -1.52
SHU2YDR078C TFA2P36145 328 aa5.56□□□□□ -1.52
SHU2YDR078C SAF1P38352 637 aa5.56□□□□□ -1.52
SHU2YDR078C TED1P40533 473 aa5.56□□□□□ -1.52
SHU2YDR078C YJL181WP46987 611 aa5.56□□□□□ -1.52
SHU2YDR078C ENT3P47160 408 aa5.56□□□□□ -1.52
SHU2YDR078C YGR130CP53278 816 aa5.56□□□□□ -1.52
SHU2YDR078C HDA2Q06629 674 aa5.56□□□□□ -1.52
SHU2YDR078C TY4A-HQ6Q5P6 413 aa5.56□□□□□ -1.52
SHU2YDR078C RAD4P14736 754 aa5.55□□□□□ -1.52
SHU2YDR078C RRP14P36080 434 aaKnown RBP5.55□□□□□ -1.52
SHU2YDR078C HXT13P39924 564 aa5.55□□□□□ -1.52
SHU2YDR078C YJR124CP47159 448 aa5.55□□□□□ -1.52
SHU2YDR078C HXT17P53631 564 aa5.55□□□□□ -1.52
SHU2YDR078C SIW14P53965 281 aa5.55□□□□□ -1.52
SHU2YDR078C HXT15P54854 567 aa5.55□□□□□ -1.52
SHU2YDR078C SOG2Q08817 791 aa5.55□□□□□ -1.52
SHU2YDR078C CHS2P14180 963 aa5.54□□□□□ -1.52
SHU2YDR078C NAM7P30771 971 aaKnown RBP5.54□□□□□ -1.52
SHU2YDR078C RDH54P38086 958 aa5.54□□□□□ -1.52
SHU2YDR078C EXO5P38289 585 aa5.54□□□□□ -1.52
SHU2YDR078C HUL5P53119 910 aa5.54□□□□□ -1.52
SHU2YDR078C ALG12P53730 551 aa5.54□□□□□ -1.52
SHU2YDR078C HTS1P07263 546 aaKnown RBP5.53□□□□□ -1.52
SHU2YDR078C HEM13P11353 328 aaKnown RBP5.53□□□□□ -1.52
SHU2YDR078C BAS1P22035 811 aa5.53□□□□□ -1.52
SHU2YDR078C YKL077WP36081 392 aa5.53□□□□□ -1.52
SHU2YDR078C AKR1P39010 764 aa5.53□□□□□ -1.52
SHU2YDR078C GIP2P40036 548 aa5.53□□□□□ -1.52
SHU2YDR078C FET4P40988 552 aa5.53□□□□□ -1.52
SHU2YDR078C KRI1P42846 591 aaKnown RBP5.53□□□□□ -1.52
SHU2YDR078C TIM54P47045 478 aa5.53□□□□□ -1.52
SHU2YDR078C YNR065CP53751 1116 aa5.53□□□□□ -1.52
SHU2YDR078C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SHU2YDR078C TRP2P00899 507 aaKnown RBP5.52□□□□□ -1.53
SHU2YDR078C VMA4P22203 233 aaKnown RBP5.52□□□□□ -1.53
SHU2YDR078C TYW3P53177 273 aa5.52□□□□□ -1.53
SHU2YDR078C SOK2P53438 785 aaPredicted RBP5.52□□□□□ -1.53
SHU2YDR078C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SHU2YDR078C PPM2Q08282 695 aa5.52□□□□□ -1.53
SHU2YDR078C REC8Q12188 680 aa5.52□□□□□ -1.53
SHU2YDR078C TY1A-LR4P0C2I8 440 aaKnown RBP5.51□□□□□ -1.53
SHU2YDR078C TY1A-DR6P0CX70 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-ER1P0CX71 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-LR2P0CX72 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-PLP0CX73 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-JR1P0CX74 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-LR3P0CX75 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-ML2P0CX76 440 aa5.51□□□□□ -1.53
SHU2YDR078C AGP1P25376 633 aa5.51□□□□□ -1.53
SHU2YDR078C LYP1P32487 611 aa5.51□□□□□ -1.53
SHU2YDR078C RER2P35196 286 aa5.51□□□□□ -1.53
SHU2YDR078C FPR3P38911 411 aaKnown RBP5.51□□□□□ -1.53
SHU2YDR078C GUP1P53154 560 aa5.51□□□□□ -1.53
SHU2YDR078C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
SHU2YDR078C ROD1Q02805 837 aa5.51□□□□□ -1.53
SHU2YDR078C SPO20Q04359 397 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-GR1Q12085 440 aa5.51□□□□□ -1.53
SHU2YDR078C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.51□□□□□ -1.53
SHU2YDR078C TY1A-OLQ92392 440 aaKnown RBP5.51□□□□□ -1.53
SHU2YDR078C SBA1P28707 216 aaKnown RBP5.5□□□□□ -1.53
SHU2YDR078C YHR020WP38708 688 aaKnown RBP5.5□□□□□ -1.53
SHU2YDR078C FAR11P53917 953 aa5.5□□□□□ -1.53
SHU2YDR078C HAS1Q03532 505 aaKnown RBP5.5□□□□□ -1.53
SHU2YDR078C SHE9Q04172 456 aa5.5□□□□□ -1.53
SHU2YDR078C CYC7P00045 113 aa5.49□□□□□ -1.53
SHU2YDR078C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SHU2YDR078C STE5P32917 917 aa5.49□□□□□ -1.53
SHU2YDR078C SEA4P38164 1038 aa5.49□□□□□ -1.53
SHU2YDR078C UTP22P53254 1237 aaPredicted RBP5.49□□□□□ -1.53
SHU2YDR078C EST2Q06163 884 aa5.49□□□□□ -1.53
SHU2YDR078C YIG1Q08956 461 aa5.49□□□□□ -1.53
SHU2YDR078C MKK2P32491 506 aa5.48□□□□□ -1.53
SHU2YDR078C ABD1P32783 436 aaPredicted RBP5.48□□□□□ -1.53
SHU2YDR078C MRP8P35719 219 aa5.48□□□□□ -1.53
SHU2YDR078C YBR184WP38299 523 aa5.48□□□□□ -1.53
SHU2YDR078C NEM1P38757 446 aa5.48□□□□□ -1.53
SHU2YDR078C NUP82P40368 713 aa5.48□□□□□ -1.53
SHU2YDR078C NEO1P40527 1151 aa5.48□□□□□ -1.53
SHU2YDR078C LEM3P42838 414 aa5.48□□□□□ -1.53
SHU2YDR078C SPO74P45819 413 aa5.48□□□□□ -1.53
SHU2YDR078C MTR4P47047 1073 aaKnown RBP5.48□□□□□ -1.53
SHU2YDR078C DSE4P53753 1117 aa5.48□□□□□ -1.53
SHU2YDR078C ESC2Q06340 456 aa5.48□□□□□ -1.53
SHU2YDR078C FLC1Q08967 793 aa5.48□□□□□ -1.53
SHU2YDR078C DED1P06634 604 aaKnown RBP5.47□□□□□ -1.53
SHU2YDR078C CHZ1P40019 153 aaPredicted RBP5.47□□□□□ -1.53
SHU2YDR078C IRR1P40541 1150 aa5.47□□□□□ -1.53
SHU2YDR078C UTP5Q04177 643 aaKnown RBP5.47□□□□□ -1.53
SHU2YDR078C YLR225CQ05948 407 aaKnown RBP5.47□□□□□ -1.53
SHU2YDR078C SPO75Q07798 868 aa5.47□□□□□ -1.53
SHU2YDR078C FMP25Q08023 583 aa5.47□□□□□ -1.53
SHU2YDR078C MET6P05694 767 aaKnown RBP5.46□□□□□ -1.54
SHU2YDR078C INO1P11986 533 aa5.46□□□□□ -1.54
SHU2YDR078C RNQ1P25367 405 aa5.46□□□□□ -1.54
SHU2YDR078C RPL8BP29453 256 aaKnown RBP5.46□□□□□ -1.54
SHU2YDR078C TIM23P32897 222 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms