RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W HXT17P53631 564 aa4.4□□□□□ -1.71
SHS1YDL225W YNR063WP53749 607 aa4.4□□□□□ -1.71
SHS1YDL225W HXT15P54854 567 aa4.4□□□□□ -1.71
SHS1YDL225W ROD1Q02805 837 aa4.4□□□□□ -1.71
SHS1YDL225W YOR223WQ12015 292 aa4.4□□□□□ -1.71
SHS1YDL225W AI3P03877 415 aa4.39□□□□□ -1.71
SHS1YDL225W ATG14P38270 344 aa4.39□□□□□ -1.71
SHS1YDL225W SPO74P45819 413 aa4.39□□□□□ -1.71
SHS1YDL225W ARI1P53111 347 aaKnown RBP4.39□□□□□ -1.71
SHS1YDL225W YGR045CP53229 120 aa4.39□□□□□ -1.71
SHS1YDL225W YPL034WQ03083 165 aa4.39□□□□□ -1.71
SHS1YDL225W AVO1Q08236 1176 aa4.39□□□□□ -1.71
SHS1YDL225W RER2P35196 286 aa4.38□□□□□ -1.71
SHS1YDL225W NCE103P53615 221 aa4.38□□□□□ -1.71
SHS1YDL225W MCA1Q08601 432 aa4.38□□□□□ -1.71
SHS1YDL225W ELA1P53861 379 aaPredicted RBP4.38□□□□□ -1.71
SHS1YDL225W EEB1Q02891 456 aa4.38□□□□□ -1.71
SHS1YDL225W DOT1Q04089 582 aaKnown RBP4.38□□□□□ -1.71
SHS1YDL225W WRS1Q12109 432 aaKnown RBP4.38□□□□□ -1.71
SHS1YDL225W MKK2P32491 506 aa4.37□□□□□ -1.71
SHS1YDL225W YAR028WP39548 234 aa4.37□□□□□ -1.71
SHS1YDL225W ENT3P47160 408 aa4.37□□□□□ -1.71
SHS1YDL225W TYW3P53177 273 aa4.37□□□□□ -1.71
SHS1YDL225W RKM2Q03942 479 aa4.37□□□□□ -1.71
SHS1YDL225W LAP2Q10740 671 aa4.37□□□□□ -1.71
SHS1YDL225W PRI2P20457 528 aa4.36□□□□□ -1.71
SHS1YDL225W GPT2P36148 743 aa4.36□□□□□ -1.71
SHS1YDL225W RAT1Q02792 1006 aaKnown RBP4.36□□□□□ -1.71
SHS1YDL225W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SHS1YDL225W OPI10Q08202 246 aa4.36□□□□□ -1.71
SHS1YDL225W TRP2P00899 507 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W CHS2P14180 963 aa4.35□□□□□ -1.71
SHS1YDL225W SYP1P25623 870 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W NNF1P47149 201 aa4.35□□□□□ -1.71
SHS1YDL225W SSF2Q12153 453 aaPredicted RBP4.35□□□□□ -1.71
SHS1YDL225W RET1P22276 1149 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W AFG2P32794 780 aa4.35□□□□□ -1.71
SHS1YDL225W KAE1P36132 386 aa4.35□□□□□ -1.71
SHS1YDL225W HSE1P38753 452 aa4.35□□□□□ -1.71
SHS1YDL225W PTC5Q12511 572 aa4.35□□□□□ -1.71
SHS1YDL225W BAS1P22035 811 aa4.34□□□□□ -1.71
SHS1YDL225W GRX1P25373 110 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W LYP1P32487 611 aa4.34□□□□□ -1.71
SHS1YDL225W ALG3P38179 458 aa4.34□□□□□ -1.71
SHS1YDL225W MSH4P40965 878 aaPredicted RBP4.34□□□□□ -1.71
SHS1YDL225W TIF35Q04067 274 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W GIC2Q06648 383 aa4.34□□□□□ -1.71
SHS1YDL225W FAL1Q12099 399 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W NNK1P36003 928 aa4.33□□□□□ -1.72
SHS1YDL225W YKL069WP36088 180 aa4.33□□□□□ -1.72
SHS1YDL225W QNS1P38795 714 aaKnown RBP4.33□□□□□ -1.72
SHS1YDL225W VPS53P47061 822 aa4.33□□□□□ -1.72
SHS1YDL225W SPO20Q04359 397 aa4.33□□□□□ -1.72
SHS1YDL225W YLR225CQ05948 407 aaKnown RBP4.33□□□□□ -1.72
SHS1YDL225W NFS1P25374 497 aa4.32□□□□□ -1.72
SHS1YDL225W NAM7P30771 971 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W SMY2P32909 740 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W MOT2P34909 587 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W SAF1P38352 637 aa4.32□□□□□ -1.72
SHS1YDL225W OCA5P38738 679 aa4.32□□□□□ -1.72
SHS1YDL225W AKR1P39010 764 aa4.32□□□□□ -1.72
SHS1YDL225W CNN1P43618 361 aa4.32□□□□□ -1.72
SHS1YDL225W RSA3Q05942 220 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W NSI1Q12457 570 aa4.32□□□□□ -1.72
SHS1YDL225W INO1P11986 533 aa4.32□□□□□ -1.72
SHS1YDL225W DBP5P20449 482 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W MAC1P35192 417 aa4.32□□□□□ -1.72
SHS1YDL225W NMD3P38861 518 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W YLR257WQ06146 321 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W TDA5Q06417 326 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W GLT1Q12680 2145 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W RPS4AP0CX35 261 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W RPS4BP0CX36 261 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W PUF4P25339 888 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SHS1YDL225W AGP1P25376 633 aa4.31□□□□□ -1.72
SHS1YDL225W MLS1P30952 554 aa4.31□□□□□ -1.72
SHS1YDL225W ABD1P32783 436 aaPredicted RBP4.31□□□□□ -1.72
SHS1YDL225W MCM7P38132 845 aa4.31□□□□□ -1.72
SHS1YDL225W SEA4P38164 1038 aa4.31□□□□□ -1.72
SHS1YDL225W SPF1P39986 1215 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W ALT1P52893 592 aa4.31□□□□□ -1.72
SHS1YDL225W ESC2Q06340 456 aa4.31□□□□□ -1.72
SHS1YDL225W AOS1Q06624 347 aa4.31□□□□□ -1.72
SHS1YDL225W KIP1P28742 1111 aa4.3□□□□□ -1.72
SHS1YDL225W RGD1P38339 666 aa4.3□□□□□ -1.72
SHS1YDL225W MPH1P40562 993 aa4.3□□□□□ -1.72
SHS1YDL225W KRI1P42846 591 aaKnown RBP4.3□□□□□ -1.72
SHS1YDL225W YGL176CP46945 554 aa4.3□□□□□ -1.72
SHS1YDL225W MED7Q08278 222 aa4.3□□□□□ -1.72
SHS1YDL225W YOL098CQ12496 1037 aa4.3□□□□□ -1.72
SHS1YDL225W OMA1P36163 345 aa4.29□□□□□ -1.72
SHS1YDL225W TAT2P38967 592 aa4.29□□□□□ -1.72
SHS1YDL225W YJL049WP47048 450 aa4.29□□□□□ -1.72
SHS1YDL225W ALO1P54783 526 aaKnown RBP4.29□□□□□ -1.72
SHS1YDL225W EAR1Q03212 550 aa4.29□□□□□ -1.72
SHS1YDL225W SBA1P28707 216 aaKnown RBP4.29□□□□□ -1.72
SHS1YDL225W MMM1P41800 426 aa4.29□□□□□ -1.72
SHS1YDL225W YGR130CP53278 816 aa4.29□□□□□ -1.72
SHS1YDL225W TPP1Q03796 238 aa4.29□□□□□ -1.72
SHS1YDL225W SHE9Q04172 456 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms