RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	GCD10	P41814	478 aa		7.7	□□□□□ -1.18
CDC13	YDL220C	RPL17B	P46990	184 aa	Known RBP	7.7	□□□□□ -1.18
CDC13	YDL220C	ESBP6	P53918	673 aa		7.7	□□□□□ -1.18
CDC13	YDL220C	ARR2	Q06597	130 aa		7.7	□□□□□ -1.18
CDC13	YDL220C	ATG23	Q06671	453 aa		7.7	□□□□□ -1.18
CDC13	YDL220C	PAP1	P29468	568 aa	Known RBP	7.69	□□□□□ -1.18
CDC13	YDL220C	VID27	P40157	782 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	NCS2	P53923	493 aa	Predicted RBP	7.69	□□□□□ -1.18
CDC13	YDL220C	TAF8	Q03750	510 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	HMG1	P12683	1054 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	SLA2	P33338	968 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	BOI1	P38041	980 aa	Known RBP	7.69	□□□□□ -1.18
CDC13	YDL220C	AMN1	P38285	549 aa	Predicted RBP	7.69	□□□□□ -1.18
CDC13	YDL220C	YPL109C	Q02981	657 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	THI22	Q06490	572 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	HTZ1	Q12692	134 aa	Known RBP	7.69	□□□□□ -1.18
CDC13	YDL220C	LYS2	P07702	1392 aa		7.69	□□□□□ -1.18
CDC13	YDL220C	CDC15	P27636	974 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	MRF1	P30775	413 aa	Predicted RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	PEX5	P35056	612 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	PTC4	P38089	393 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	SPO71	Q03868	1245 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	CSR1	Q06705	408 aa	Known RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	SBP1	P10080	294 aa	Known RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	VAN1	P23642	535 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	MRE11	P32829	692 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	HCS1	P34243	683 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	SDS3	P40505	327 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	MIC19	P43594	170 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	FYV8	P46949	817 aa	Known RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	WAR1	Q03631	944 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	CWC15	Q03772	175 aa	Known RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	SPP382	Q06411	708 aa	Predicted RBP	7.68	□□□□□ -1.18
CDC13	YDL220C	PDR12	Q02785	1511 aa		7.68	□□□□□ -1.18
CDC13	YDL220C	RAD5	P32849	1169 aa	Predicted RBP	7.67	□□□□□ -1.18
CDC13	YDL220C	HSM3	P38348	480 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	YEL023C	P39992	682 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	GVP36	P40531	326 aa	Known RBP	7.67	□□□□□ -1.18
CDC13	YDL220C	YKR005C	Q02203	525 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	GPR1	Q12361	961 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	RSR1	P13856	272 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	FZO1	P38297	855 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	IMD4	P50094	524 aa	Known RBP	7.67	□□□□□ -1.18
CDC13	YDL220C	LSG1	P53145	640 aa	Known RBP	7.67	□□□□□ -1.18
CDC13	YDL220C	ERP6	P53198	216 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	COP1	P53622	1201 aa	Known RBP	7.67	□□□□□ -1.18
CDC13	YDL220C	COG6	P53959	839 aa		7.67	□□□□□ -1.18
CDC13	YDL220C	KGD2	P19262	463 aa	Predicted RBP	7.66	□□□□□ -1.18
CDC13	YDL220C	MRPL25	P23369	157 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	SEC21	P32074	935 aa	Known RBP	7.66	□□□□□ -1.18
CDC13	YDL220C	RNR4	P49723	345 aa	Known RBP	7.66	□□□□□ -1.18
CDC13	YDL220C	TRS120	Q04183	1289 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	SSC1	P0CS90	654 aa	Known RBP	7.66	□□□□□ -1.18
CDC13	YDL220C	PRP22	P24384	1145 aa	Known RBP	7.66	□□□□□ -1.18
CDC13	YDL220C	HSP78	P33416	811 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	ADA2	Q02336	434 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	MCP2	Q06567	569 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	SNF2	P22082	1703 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	RAV1	P47104	1357 aa		7.66	□□□□□ -1.18
CDC13	YDL220C	SEG2	P34250	1132 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	SET1	P38827	1080 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	ENT3	P47160	408 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	STR2	P47164	639 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	RAD17	P48581	401 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	ARI1	P53111	347 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	PCL10	P53124	433 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	JIP5	Q06214	492 aa	Predicted RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	FUS1	P11710	512 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	SEN2	P16658	377 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	THR1	P17423	357 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	LIN1	P38852	340 aa	Predicted RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	CAJ1	P39101	391 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	UBP12	P39538	1254 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	SCS2	P40075	244 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	SGM1	P47166	707 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	ZDS1	P50111	915 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	HEF3	P53978	1044 aa	Known RBP	7.65	□□□□□ -1.18
CDC13	YDL220C	YLH47	Q06493	454 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	PMT7	Q06644	662 aa		7.65	□□□□□ -1.18
CDC13	YDL220C	TAL1	P15019	335 aa	Known RBP	7.65	□□□□□ -1.19
CDC13	YDL220C	DPB3	P27344	201 aa		7.65	□□□□□ -1.19
CDC13	YDL220C	STO1	P34160	861 aa	Known RBP	7.65	□□□□□ -1.19
CDC13	YDL220C	REV7	P38927	245 aa		7.65	□□□□□ -1.19
CDC13	YDL220C	NOC2	P39744	710 aa	Known RBP	7.65	□□□□□ -1.19
CDC13	YDL220C	HAM1	P47119	197 aa	Known RBP	7.65	□□□□□ -1.19
CDC13	YDL220C	OCA6	Q12454	224 aa		7.65	□□□□□ -1.19
CDC13	YDL220C	LTE1	P07866	1435 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	ADE3	P07245	946 aa	Known RBP	7.64	□□□□□ -1.19
CDC13	YDL220C	GPA1	P08539	472 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	SPP381	P38282	291 aa	Predicted RBP	7.64	□□□□□ -1.19
CDC13	YDL220C	VMA22	P38784	181 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	TEL2	P53038	688 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	PPM1	Q04081	328 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	SXM1	Q04175	944 aa	Known RBP	7.64	□□□□□ -1.19
CDC13	YDL220C	YOL036W	Q08206	761 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	SGT2	Q12118	346 aa	Known RBP	7.64	□□□□□ -1.19
CDC13	YDL220C	RTP1	Q12751	981 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	YNL144C	P53907	740 aa		7.64	□□□□□ -1.19
CDC13	YDL220C	OCA4	P25366	362 aa		7.63	□□□□□ -1.19
CDC13	YDL220C	NIP100	P33420	868 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms