RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	GCD10	P41814	478 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	YRB1	P41920	201 aa	Known RBP	6.35	□□□□□ -1.39
SUB2	YDL084W	ALG2	P43636	503 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	MET12	P46151	657 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	DCP2	P53550	970 aa	Known RBP	6.35	□□□□□ -1.39
SUB2	YDL084W	YNL144C	P53907	740 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	SPO20	Q04359	397 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	YMR018W	Q04364	514 aa		6.35	□□□□□ -1.39
SUB2	YDL084W	YLR326W	Q06170	240 aa	Known RBP	6.35	□□□□□ -1.39
SUB2	YDL084W	NOB1	Q08444	459 aa	Known RBP	6.35	□□□□□ -1.39
SUB2	YDL084W	TEF1	P02994	458 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	GAL1	P04385	528 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	HEM1	P09950	548 aa	Predicted RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	MPH2	P0CD99	609 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	SMY2	P32909	740 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	PEX6	P33760	1030 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	YKL050C	P35736	922 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	HSM3	P38348	480 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	GGA2	P38817	585 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	SET1	P38827	1080 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	CCT3	P39077	534 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	RGA1	P39083	1007 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	BUD6	P41697	788 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	RET2	P43621	546 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	APL6	P46682	809 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	TRF5	P48561	642 aa	Known RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	SPO1	P53541	631 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	DNL4	Q08387	944 aa	Predicted RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	RKM1	Q08961	583 aa	Predicted RBP	6.34	□□□□□ -1.39
SUB2	YDL084W	HAT1	Q12341	374 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	YPR015C	Q12531	247 aa		6.34	□□□□□ -1.39
SUB2	YDL084W	RAS1	P01119	309 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	CLB1	P24868	471 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	YDJ1	P25491	409 aa	Known RBP	6.33	□□□□□ -1.4
SUB2	YDL084W	ITR1	P30605	584 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	SEC8	P32855	1065 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	MIA40	P36046	403 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	PSY4	P38193	441 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	SPT8	P38915	602 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	YJL070C	P40361	888 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	MAD1	P40957	749 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	VPS70	P47161	811 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	HST1	P53685	503 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	BRX1	Q08235	291 aa	Known RBP	6.33	□□□□□ -1.4
SUB2	YDL084W	ALR1	Q08269	859 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	CIR2	Q08822	631 aa		6.33	□□□□□ -1.4
SUB2	YDL084W	NTG1	P31378	399 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	GLC3	P32775	704 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	SET3	P36124	751 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	PIH1	P38768	344 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	STN1	P38960	494 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	YEN1	P40028	759 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	SAP185	P40856	1058 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	NOP15	P53927	220 aa	Predicted RBP	6.32	□□□□□ -1.4
SUB2	YDL084W	UTP14	Q04500	899 aa	Known RBP	6.32	□□□□□ -1.4
SUB2	YDL084W	UTP13	Q05946	817 aa	Known RBP	6.32	□□□□□ -1.4
SUB2	YDL084W	ISU2	Q12056	156 aa		6.32	□□□□□ -1.4
SUB2	YDL084W	RTC1	Q08281	1341 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	RAM1	P22007	431 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	ROX1	P25042	368 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	MRC1	P25588	1096 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	KIP2	P28743	706 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	ECM32	P32644	1121 aa	Known RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	PXA2	P34230	853 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	MRP8	P35719	219 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	MNR2	P35724	969 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	RTS1	P38903	757 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	ATG32	P40458	529 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	YPP1	P46951	817 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	ATG1	P53104	897 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	GIM3	P53900	129 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	PTA1	Q01329	785 aa	Predicted RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	VPS60	Q03390	229 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	RRP17	Q04031	235 aa	Predicted RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	ESF1	Q06344	628 aa	Known RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	CRN1	Q06440	651 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	TSR2	Q06672	205 aa	Known RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	MCD1	Q12158	566 aa		6.31	□□□□□ -1.4
SUB2	YDL084W	IKI3	Q06706	1349 aa	Known RBP	6.31	□□□□□ -1.4
SUB2	YDL084W	RAD4	P14736	754 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	GLK1	P17709	500 aa	Known RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	PMA2	P19657	947 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	GFD2	P25370	566 aa	Known RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	POL4	P25615	582 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	CDC48	P25694	835 aa	Known RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	YME2	P32843	850 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	NUP120	P35729	1037 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	REI1	P38344	393 aa	Predicted RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	IPL1	P38991	367 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	MNN1	P39106	762 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	RIO2	P40160	425 aa	Known RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	IML2	P47031	731 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	ALF1	P53904	254 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	YDR286C	Q05530	114 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	YOR378W	Q08902	515 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	PGC1	Q08959	321 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	TAF3	Q12297	353 aa		6.3	□□□□□ -1.4
SUB2	YDL084W	LSO2	Q3E772	92 aa	Known RBP	6.3	□□□□□ -1.4
SUB2	YDL084W	STF1	P01098	86 aa		6.29	□□□□□ -1.4
SUB2	YDL084W	ADE8	P04161	214 aa		6.29	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms