RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A HDA2Q06629 674 aa5.19□□□□□ -1.58
RIM1YCR028C-A YLR122CQ12312 125 aa5.19□□□□□ -1.58
RIM1YCR028C-A DED1P06634 604 aaKnown RBP5.18□□□□□ -1.58
RIM1YCR028C-A TAF13P11747 167 aa5.18□□□□□ -1.58
RIM1YCR028C-A RET1P22276 1149 aaKnown RBP5.18□□□□□ -1.58
RIM1YCR028C-A NFS1P25374 497 aa5.18□□□□□ -1.58
RIM1YCR028C-A PET112P33893 541 aa5.18□□□□□ -1.58
RIM1YCR028C-A RAD27P26793 382 aa5.17□□□□□ -1.58
RIM1YCR028C-A SMY2P32909 740 aaKnown RBP5.17□□□□□ -1.58
RIM1YCR028C-A HSE1P38753 452 aa5.17□□□□□ -1.58
RIM1YCR028C-A MMM1P41800 426 aa5.17□□□□□ -1.58
RIM1YCR028C-A YGR130CP53278 816 aa5.17□□□□□ -1.58
RIM1YCR028C-A ROD1Q02805 837 aa5.17□□□□□ -1.58
RIM1YCR028C-A SVF1Q05515 481 aa5.17□□□□□ -1.58
RIM1YCR028C-A JIP5Q06214 492 aaPredicted RBP5.17□□□□□ -1.58
RIM1YCR028C-A MSB1P21339 1137 aaKnown RBP5.16□□□□□ -1.58
RIM1YCR028C-A WHI3P34761 661 aaKnown RBP5.16□□□□□ -1.58
RIM1YCR028C-A EAR1Q03212 550 aa5.16□□□□□ -1.58
RIM1YCR028C-A RKM2Q03942 479 aa5.16□□□□□ -1.58
RIM1YCR028C-A RTT10Q08924 1013 aa5.16□□□□□ -1.58
RIM1YCR028C-A TRP3P00937 484 aa5.15□□□□□ -1.59
RIM1YCR028C-A MNR2P35724 969 aa5.15□□□□□ -1.59
RIM1YCR028C-A NMD3P38861 518 aaKnown RBP5.15□□□□□ -1.59
RIM1YCR028C-A ALT1P52893 592 aa5.15□□□□□ -1.59
RIM1YCR028C-A SIW14P53965 281 aa5.15□□□□□ -1.59
RIM1YCR028C-A YLR257WQ06146 321 aaKnown RBP5.15□□□□□ -1.59
RIM1YCR028C-A NAP1P25293 417 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A PAM1P37304 830 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A QNS1P38795 714 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A MAD1P40957 749 aa5.14□□□□□ -1.59
RIM1YCR028C-A CIT3P43635 486 aa5.14□□□□□ -1.59
RIM1YCR028C-A VPS53P47061 822 aa5.14□□□□□ -1.59
RIM1YCR028C-A GNP1P48813 663 aa5.14□□□□□ -1.59
RIM1YCR028C-A RCM1P53972 490 aa5.14□□□□□ -1.59
RIM1YCR028C-A ALO1P54783 526 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A RSA3Q05942 220 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A TMA46Q12000 345 aaKnown RBP5.14□□□□□ -1.59
RIM1YCR028C-A PTC5Q12511 572 aa5.14□□□□□ -1.59
RIM1YCR028C-A CDC34P14682 295 aa5.13□□□□□ -1.59
RIM1YCR028C-A MKK2P32491 506 aa5.13□□□□□ -1.59
RIM1YCR028C-A AFG2P32794 780 aa5.13□□□□□ -1.59
RIM1YCR028C-A MAC1P35192 417 aa5.13□□□□□ -1.59
RIM1YCR028C-A HXT13P39924 564 aa5.13□□□□□ -1.59
RIM1YCR028C-A HXT17P53631 564 aa5.13□□□□□ -1.59
RIM1YCR028C-A CWC24P53769 259 aa5.13□□□□□ -1.59
RIM1YCR028C-A HXT15P54854 567 aa5.13□□□□□ -1.59
RIM1YCR028C-A RAT1Q02792 1006 aaKnown RBP5.13□□□□□ -1.59
RIM1YCR028C-A TPP1Q03796 238 aa5.13□□□□□ -1.59
RIM1YCR028C-A MED7Q08278 222 aa5.13□□□□□ -1.59
RIM1YCR028C-A YOR059CQ08448 450 aaKnown RBP5.13□□□□□ -1.59
RIM1YCR028C-A PUS7Q08647 676 aaKnown RBP5.13□□□□□ -1.59
RIM1YCR028C-A CYC7P00045 113 aa5.12□□□□□ -1.59
RIM1YCR028C-A RER2P35196 286 aa5.12□□□□□ -1.59
RIM1YCR028C-A ALG3P38179 458 aa5.12□□□□□ -1.59
RIM1YCR028C-A ENT3P47160 408 aa5.12□□□□□ -1.59
RIM1YCR028C-A NOP7P53261 605 aaKnown RBP5.12□□□□□ -1.59
RIM1YCR028C-A YVC1Q12324 675 aa5.12□□□□□ -1.59
RIM1YCR028C-A NSI1Q12457 570 aa5.12□□□□□ -1.59
RIM1YCR028C-A CLN2P20438 545 aa5.11□□□□□ -1.59
RIM1YCR028C-A SYP1P25623 870 aaKnown RBP5.11□□□□□ -1.59
RIM1YCR028C-A DUT1P33317 147 aa5.11□□□□□ -1.59
RIM1YCR028C-A KIP1P28742 1111 aa5.1□□□□□ -1.59
RIM1YCR028C-A YKR073CP36153 106 aa5.1□□□□□ -1.59
RIM1YCR028C-A OMA1P36163 345 aa5.1□□□□□ -1.59
RIM1YCR028C-A MET10P39692 1035 aa5.1□□□□□ -1.59
RIM1YCR028C-A GDE1Q02979 1223 aa5.1□□□□□ -1.59
RIM1YCR028C-A HRK1Q08732 759 aaKnown RBP5.1□□□□□ -1.59
RIM1YCR028C-A GCD1P09032 578 aaPredicted RBP5.09□□□□□ -1.59
RIM1YCR028C-A VPS16Q03308 798 aa5.09□□□□□ -1.59
RIM1YCR028C-A PIN2Q12057 282 aa5.09□□□□□ -1.59
RIM1YCR028C-A TOS1P38288 455 aa5.08□□□□□ -1.6
RIM1YCR028C-A OYE3P41816 400 aaPredicted RBP5.08□□□□□ -1.6
RIM1YCR028C-A CNN1P43618 361 aa5.08□□□□□ -1.6
RIM1YCR028C-A YJL045WP47052 634 aa5.08□□□□□ -1.6
RIM1YCR028C-A FAA4P47912 694 aaKnown RBP5.08□□□□□ -1.6
RIM1YCR028C-A TYW3P53177 273 aa5.08□□□□□ -1.6
RIM1YCR028C-A YGR053CP53234 283 aa5.08□□□□□ -1.6
RIM1YCR028C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
RIM1YCR028C-A TRE1Q08919 783 aa5.08□□□□□ -1.6
RIM1YCR028C-A DBP5P20449 482 aaKnown RBP5.07□□□□□ -1.6
RIM1YCR028C-A MLS1P30952 554 aa5.07□□□□□ -1.6
RIM1YCR028C-A PEX7P39108 375 aa5.07□□□□□ -1.6
RIM1YCR028C-A GPB2P39717 880 aa5.07□□□□□ -1.6
RIM1YCR028C-A EEB1Q02891 456 aa5.07□□□□□ -1.6
RIM1YCR028C-A TIF35Q04067 274 aaKnown RBP5.07□□□□□ -1.6
RIM1YCR028C-A MAG2Q06436 670 aaKnown RBP5.07□□□□□ -1.6
RIM1YCR028C-A LYP1P32487 611 aa5.06□□□□□ -1.6
RIM1YCR028C-A PUB1P32588 453 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6 RIP-Chip
RIM1YCR028C-A YSC84P32793 468 aa5.06□□□□□ -1.6
RIM1YCR028C-A RGD1P38339 666 aa5.06□□□□□ -1.6
RIM1YCR028C-A YHL012WP38709 493 aa5.06□□□□□ -1.6
RIM1YCR028C-A VAC8P39968 578 aa5.06□□□□□ -1.6
RIM1YCR028C-A INP52P50942 1183 aa5.06□□□□□ -1.6
RIM1YCR028C-A SDH1Q00711 640 aa5.06□□□□□ -1.6
RIM1YCR028C-A YPL260WQ08977 551 aa5.06□□□□□ -1.6
RIM1YCR028C-A SPO21Q12411 609 aa5.06□□□□□ -1.6
RIM1YCR028C-A TRP2P00899 507 aaKnown RBP5.05□□□□□ -1.6
RIM1YCR028C-A PRO1P32264 428 aa5.05□□□□□ -1.6
RIM1YCR028C-A LIP5P32875 414 aa5.05□□□□□ -1.6
RIM1YCR028C-A MCM7P38132 845 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 281.7 ms