RNA–Protein interactions for RNA: YCR013C

YCR013C, Transcript of Dubious open reading frame, yeast

Gene YCR013C, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR013C	YCR013C	VPS16	Q03308	798 aa		4.85	□□□□□ -1.63
YCR013C	YCR013C	RTT10	Q08924	1013 aa		4.85	□□□□□ -1.63
YCR013C	YCR013C	CDC34	P14682	295 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	RAD27	P26793	382 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	NMD3	P38861	518 aa	Known RBP	4.84	□□□□□ -1.63
YCR013C	YCR013C	AKR1	P39010	764 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	YAR028W	P39548	234 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	HXT13	P39924	564 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	HXT17	P53631	564 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	HXT15	P54854	567 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	GDE1	Q02979	1223 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	YPL034W	Q03083	165 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	PIN2	Q12057	282 aa		4.84	□□□□□ -1.63
YCR013C	YCR013C	CLN2	P20438	545 aa		4.83	□□□□□ -1.64
YCR013C	YCR013C	RER2	P35196	286 aa		4.83	□□□□□ -1.64
YCR013C	YCR013C	FAA4	P47912	694 aa	Known RBP	4.83	□□□□□ -1.64
YCR013C	YCR013C	RAT1	Q02792	1006 aa	Known RBP	4.83	□□□□□ -1.64
YCR013C	YCR013C	GIC2	Q06648	383 aa		4.83	□□□□□ -1.64
YCR013C	YCR013C	RET1	P22276	1149 aa	Known RBP	4.82	□□□□□ -1.64
YCR013C	YCR013C	NAP1	P25293	417 aa	Known RBP	4.82	□□□□□ -1.64
YCR013C	YCR013C	AFG2	P32794	780 aa		4.82	□□□□□ -1.64
YCR013C	YCR013C	MSH4	P40965	878 aa	Predicted RBP	4.82	□□□□□ -1.64
YCR013C	YCR013C	SIW14	P53965	281 aa		4.82	□□□□□ -1.64
YCR013C	YCR013C	GLT1	Q12680	2145 aa	Known RBP	4.81	□□□□□ -1.64
YCR013C	YCR013C	TAF13	P11747	167 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	NFS1	P25374	497 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	MKK2	P32491	506 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	EEB1	Q02891	456 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	EAR1	Q03212	550 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	LAP2	Q10740	671 aa		4.81	□□□□□ -1.64
YCR013C	YCR013C	TMA46	Q12000	345 aa	Known RBP	4.81	□□□□□ -1.64
YCR013C	YCR013C	RPS4A	P0CX35	261 aa	Known RBP	4.8	□□□□□ -1.64
YCR013C	YCR013C	RPS4B	P0CX36	261 aa	Known RBP	4.8	□□□□□ -1.64
YCR013C	YCR013C	PRI2	P20457	528 aa		4.8	□□□□□ -1.64
YCR013C	YCR013C	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
YCR013C	YCR013C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
YCR013C	YCR013C	YLR257W	Q06146	321 aa	Known RBP	4.8	□□□□□ -1.64
YCR013C	YCR013C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
YCR013C	YCR013C	SYP1	P25623	870 aa	Known RBP	4.79	□□□□□ -1.64
YCR013C	YCR013C	COQ2	P32378	372 aa		4.79	□□□□□ -1.64
YCR013C	YCR013C	ALG3	P38179	458 aa		4.79	□□□□□ -1.64
YCR013C	YCR013C	QNS1	P38795	714 aa	Known RBP	4.79	□□□□□ -1.64
YCR013C	YCR013C	RKM2	Q03942	479 aa		4.79	□□□□□ -1.64
YCR013C	YCR013C	RSA3	Q05942	220 aa	Known RBP	4.79	□□□□□ -1.64
YCR013C	YCR013C	PTC5	Q12511	572 aa		4.79	□□□□□ -1.64
YCR013C	YCR013C	BAS1	P22035	811 aa		4.78	□□□□□ -1.64
YCR013C	YCR013C	SMY2	P32909	740 aa	Known RBP	4.78	□□□□□ -1.64
YCR013C	YCR013C	WHI3	P34761	661 aa	Known RBP	4.78	□□□□□ -1.64
YCR013C	YCR013C	MOT2	P34909	587 aa	Known RBP	4.78	□□□□□ -1.64
YCR013C	YCR013C	NNK1	P36003	928 aa		4.78	□□□□□ -1.64
YCR013C	YCR013C	SAF1	P38352	637 aa		4.78	□□□□□ -1.64
YCR013C	YCR013C	HSE1	P38753	452 aa		4.78	□□□□□ -1.64
YCR013C	YCR013C	TYW3	P53177	273 aa		4.78	□□□□□ -1.64
YCR013C	YCR013C	YLR225C	Q05948	407 aa	Known RBP	4.78	□□□□□ -1.64
YCR013C	YCR013C	TRP2	P00899	507 aa	Known RBP	4.77	□□□□□ -1.65
YCR013C	YCR013C	MLS1	P30952	554 aa		4.77	□□□□□ -1.65
YCR013C	YCR013C	LYP1	P32487	611 aa		4.77	□□□□□ -1.65
YCR013C	YCR013C	PGM1	P33401	570 aa	Known RBP	4.77	□□□□□ -1.65
YCR013C	YCR013C	TIF35	Q04067	274 aa	Known RBP	4.77	□□□□□ -1.65
YCR013C	YCR013C	OPI10	Q08202	246 aa		4.77	□□□□□ -1.65
YCR013C	YCR013C	CHS2	P14180	963 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	KIP1	P28742	1111 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	GPB2	P39717	880 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	MMM1	P41800	426 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	VPS53	P47061	822 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	ENT3	P47160	408 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	ALT1	P52893	592 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	YGR130C	P53278	816 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	TPP1	Q03796	238 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	ESC2	Q06340	456 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	FAL1	Q12099	399 aa	Known RBP	4.76	□□□□□ -1.65
YCR013C	YCR013C	YLR122C	Q12312	125 aa		4.76	□□□□□ -1.65
YCR013C	YCR013C	SBP1	P10080	294 aa	Known RBP	4.75	□□□□□ -1.65
YCR013C	YCR013C	DBP5	P20449	482 aa	Known RBP	4.75	□□□□□ -1.65
YCR013C	YCR013C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
YCR013C	YCR013C	YKL069W	P36088	180 aa		4.75	□□□□□ -1.65
YCR013C	YCR013C	KAE1	P36132	386 aa		4.75	□□□□□ -1.65
YCR013C	YCR013C	MCM7	P38132	845 aa		4.75	□□□□□ -1.65
YCR013C	YCR013C	CNN1	P43618	361 aa		4.75	□□□□□ -1.65
YCR013C	YCR013C	AOS1	Q06624	347 aa		4.75	□□□□□ -1.65
YCR013C	YCR013C	PUS7	Q08647	676 aa	Known RBP	4.75	□□□□□ -1.65
YCR013C	YCR013C	WRS1	Q12109	432 aa	Known RBP	4.75	□□□□□ -1.65
YCR013C	YCR013C	INO1	P11986	533 aa		4.74	□□□□□ -1.65
YCR013C	YCR013C	ABD1	P32783	436 aa	Predicted RBP	4.74	□□□□□ -1.65
YCR013C	YCR013C	YJL045W	P47052	634 aa		4.74	□□□□□ -1.65
YCR013C	YCR013C	RCM1	P53972	490 aa		4.74	□□□□□ -1.65
YCR013C	YCR013C	YVC1	Q12324	675 aa		4.74	□□□□□ -1.65
YCR013C	YCR013C	TRP3	P00937	484 aa		4.73	□□□□□ -1.65
YCR013C	YCR013C	GRX1	P25373	110 aa	Known RBP	4.73	□□□□□ -1.65
YCR013C	YCR013C	MPH1	P40562	993 aa		4.73	□□□□□ -1.65
YCR013C	YCR013C	CIT3	P43635	486 aa		4.73	□□□□□ -1.65
YCR013C	YCR013C	SPO20	Q04359	397 aa		4.73	□□□□□ -1.65
YCR013C	YCR013C	SPO21	Q12411	609 aa		4.73	□□□□□ -1.65
YCR013C	YCR013C	YER152C	P10356	443 aa		4.72	□□□□□ -1.65
YCR013C	YCR013C	MSB1	P21339	1137 aa	Known RBP	4.72	□□□□□ -1.65
YCR013C	YCR013C	SEA4	P38164	1038 aa		4.72	□□□□□ -1.65
YCR013C	YCR013C	RGD1	P38339	666 aa		4.72	□□□□□ -1.65
YCR013C	YCR013C	YGL176C	P46945	554 aa		4.72	□□□□□ -1.65
YCR013C	YCR013C	YSC84	P32793	468 aa		4.71	□□□□□ -1.66
YCR013C	YCR013C	ALO1	P54783	526 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms