RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W HTS1P07263 546 aaKnown RBP4.42□□□□□ -1.7
DPB3YBR278W VMA4P22203 233 aaKnown RBP4.42□□□□□ -1.7
DPB3YBR278W AGP1P25376 633 aa4.42□□□□□ -1.7
DPB3YBR278W SBA1P28707 216 aaKnown RBP4.42□□□□□ -1.7
DPB3YBR278W KNS1P32350 737 aaPredicted RBP4.42□□□□□ -1.7
DPB3YBR278W TIM23P32897 222 aa4.42□□□□□ -1.7
DPB3YBR278W RER2P35196 286 aa4.42□□□□□ -1.7
DPB3YBR278W SEA4P38164 1038 aa4.42□□□□□ -1.7
DPB3YBR278W KRI1P42846 591 aaKnown RBP4.42□□□□□ -1.7
DPB3YBR278W YNR065CP53751 1116 aa4.42□□□□□ -1.7
DPB3YBR278W ROD1Q02805 837 aa4.42□□□□□ -1.7
DPB3YBR278W TY1A-DR2Q03964 440 aaKnown RBP4.42□□□□□ -1.7
DPB3YBR278W REC8Q12188 680 aa4.42□□□□□ -1.7
DPB3YBR278W PDC5P16467 563 aaKnown RBP4.41□□□□□ -1.7
DPB3YBR278W ABD1P32783 436 aaPredicted RBP4.41□□□□□ -1.7
DPB3YBR278W STE5P32917 917 aa4.41□□□□□ -1.7
DPB3YBR278W NUP82P40368 713 aa4.41□□□□□ -1.7
DPB3YBR278W SHE9Q04172 456 aa4.41□□□□□ -1.7
DPB3YBR278W YIG1Q08956 461 aa4.41□□□□□ -1.7
DPB3YBR278W FLC1Q08967 793 aa4.41□□□□□ -1.7
DPB3YBR278W DED1P06634 604 aaKnown RBP4.4□□□□□ -1.71
DPB3YBR278W GAL11P19659 1081 aa4.4□□□□□ -1.71
DPB3YBR278W MRP8P35719 219 aa4.4□□□□□ -1.71
DPB3YBR278W YKL077WP36081 392 aa4.4□□□□□ -1.71
DPB3YBR278W YBR184WP38299 523 aa4.4□□□□□ -1.71
DPB3YBR278W NEM1P38757 446 aa4.4□□□□□ -1.71
DPB3YBR278W NEO1P40527 1151 aa4.4□□□□□ -1.71
DPB3YBR278W HAS1Q03532 505 aaKnown RBP4.4□□□□□ -1.71
DPB3YBR278W YLR125WQ12138 136 aa4.4□□□□□ -1.71
DPB3YBR278W PHO8P11491 566 aa4.39□□□□□ -1.71
DPB3YBR278W INO1P11986 533 aa4.39□□□□□ -1.71
DPB3YBR278W MKK2P32491 506 aa4.39□□□□□ -1.71
DPB3YBR278W MOT2P34909 587 aaKnown RBP4.39□□□□□ -1.71
DPB3YBR278W VBA5P36172 582 aa4.39□□□□□ -1.71
DPB3YBR278W TAT1P38085 619 aa4.39□□□□□ -1.71
DPB3YBR278W MTR4P47047 1073 aaKnown RBP4.39□□□□□ -1.71
DPB3YBR278W GUP1P53154 560 aa4.39□□□□□ -1.71
DPB3YBR278W UTP22P53254 1237 aaPredicted RBP4.39□□□□□ -1.71
DPB3YBR278W POB3Q04636 552 aaKnown RBP4.39□□□□□ -1.71
DPB3YBR278W FMP25Q08023 583 aa4.39□□□□□ -1.71
DPB3YBR278W OSH2Q12451 1283 aa4.39□□□□□ -1.71
DPB3YBR278W MET6P05694 767 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W YCK2P23292 546 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W RPL8BP29453 256 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W CHZ1P40019 153 aaPredicted RBP4.38□□□□□ -1.71
DPB3YBR278W IRR1P40541 1150 aa4.38□□□□□ -1.71
DPB3YBR278W PFD1P46988 109 aa4.38□□□□□ -1.71
DPB3YBR278W ERP6P53198 216 aa4.38□□□□□ -1.71
DPB3YBR278W YGR125WP53273 1036 aa4.38□□□□□ -1.71
DPB3YBR278W RAT1Q02792 1006 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W TIF35Q04067 274 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W UTP5Q04177 643 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W YLR225CQ05948 407 aaKnown RBP4.38□□□□□ -1.71
DPB3YBR278W EST2Q06163 884 aa4.38□□□□□ -1.71
DPB3YBR278W AOS1Q06624 347 aa4.38□□□□□ -1.71
DPB3YBR278W SPO75Q07798 868 aa4.38□□□□□ -1.71
DPB3YBR278W YDR215CQ12240 137 aa4.38□□□□□ -1.71
DPB3YBR278W HSP60P19882 572 aaKnown RBP4.37□□□□□ -1.71
DPB3YBR278W DBP5P20449 482 aaKnown RBP4.37□□□□□ -1.71
DPB3YBR278W SYP1P25623 870 aaKnown RBP4.37□□□□□ -1.71
DPB3YBR278W YKL107WP34251 309 aa4.37□□□□□ -1.71
DPB3YBR278W PBY1P38254 753 aa4.37□□□□□ -1.71
DPB3YBR278W MNN1P39106 762 aa4.37□□□□□ -1.71
DPB3YBR278W RSP5P39940 809 aaKnown RBP4.37□□□□□ -1.71
DPB3YBR278W LEM3P42838 414 aa4.37□□□□□ -1.71
DPB3YBR278W CNN1P43618 361 aa4.37□□□□□ -1.71
DPB3YBR278W RKM2Q03942 479 aa4.37□□□□□ -1.71
DPB3YBR278W YPL066WQ12194 479 aa4.37□□□□□ -1.71
DPB3YBR278W RKM4Q12504 494 aa4.37□□□□□ -1.71
DPB3YBR278W CIT1P00890 479 aa4.36□□□□□ -1.71
DPB3YBR278W CAN1P04817 590 aa4.36□□□□□ -1.71
DPB3YBR278W ERR1P0CX10 437 aa4.36□□□□□ -1.71
DPB3YBR278W ERR2P0CX11 437 aa4.36□□□□□ -1.71
DPB3YBR278W PRP9P19736 530 aaKnown RBP4.36□□□□□ -1.71
DPB3YBR278W ADD66P36040 267 aa4.36□□□□□ -1.71
DPB3YBR278W ARL1P38116 183 aaKnown RBP4.36□□□□□ -1.71
DPB3YBR278W GGA2P38817 585 aaKnown RBP4.36□□□□□ -1.71
DPB3YBR278W SLN1P39928 1220 aaPredicted RBP4.36□□□□□ -1.71
DPB3YBR278W SLS1P42900 643 aa4.36□□□□□ -1.71
DPB3YBR278W YJR142WP47173 342 aa4.36□□□□□ -1.71
DPB3YBR278W GCV1P48015 400 aa4.36□□□□□ -1.71
DPB3YBR278W SOK2P53438 785 aaPredicted RBP4.36□□□□□ -1.71
DPB3YBR278W PUF4P25339 888 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
DPB3YBR278W AFG2P32794 780 aa4.35□□□□□ -1.71
DPB3YBR278W PAN5P38787 379 aa4.35□□□□□ -1.71
DPB3YBR278W SNF7P39929 240 aaKnown RBP4.35□□□□□ -1.71
DPB3YBR278W HNT2P49775 206 aa4.35□□□□□ -1.71
DPB3YBR278W MEC3Q02574 474 aa4.35□□□□□ -1.71
DPB3YBR278W SPO71Q03868 1245 aa4.35□□□□□ -1.71
DPB3YBR278W GIS4Q04233 774 aa4.35□□□□□ -1.71
DPB3YBR278W EAF1Q06337 982 aa4.35□□□□□ -1.71
DPB3YBR278W MCA1Q08601 432 aa4.35□□□□□ -1.71
DPB3YBR278W YGR161W-CQ3E744 92 aa4.35□□□□□ -1.71
DPB3YBR278W NAR1P23503 491 aaKnown RBP4.34□□□□□ -1.71
DPB3YBR278W ARE1P25628 610 aa4.34□□□□□ -1.71
DPB3YBR278W THI4P32318 326 aa4.34□□□□□ -1.71
DPB3YBR278W PIN4P34217 668 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
DPB3YBR278W MCM7P38132 845 aa4.34□□□□□ -1.71
DPB3YBR278W ALG3P38179 458 aa4.34□□□□□ -1.71
DPB3YBR278W TED1P40533 473 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms