RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	PET112	P33893	541 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	ENT3	P47160	408 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	GNP1	P48813	663 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	ALT1	P52893	592 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	SIW14	P53965	281 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	MRL1	Q06815	381 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	LAP2	Q10740	671 aa		4.89	□□□□□ -1.63
YRO2	YBR054W	RPS4A	P0CX35	261 aa	Known RBP	4.88	□□□□□ -1.63
YRO2	YBR054W	RPS4B	P0CX36	261 aa	Known RBP	4.88	□□□□□ -1.63
YRO2	YBR054W	MSB1	P21339	1137 aa	Known RBP	4.88	□□□□□ -1.63
YRO2	YBR054W	NAP1	P25293	417 aa	Known RBP	4.88	□□□□□ -1.63
YRO2	YBR054W	MNR2	P35724	969 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	HSE1	P38753	452 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	HXT13	P39924	564 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	HXT17	P53631	564 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	YNR063W	P53749	607 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	HXT15	P54854	567 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	RTT10	Q08924	1013 aa		4.88	□□□□□ -1.63
YRO2	YBR054W	RET1	P22276	1149 aa	Known RBP	4.87	□□□□□ -1.63
YRO2	YBR054W	PAM1	P37304	830 aa	Known RBP	4.87	□□□□□ -1.63
YRO2	YBR054W	CIT3	P43635	486 aa		4.87	□□□□□ -1.63
YRO2	YBR054W	ROD1	Q02805	837 aa		4.87	□□□□□ -1.63
YRO2	YBR054W	DED1	P06634	604 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	SBP1	P10080	294 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	AFG2	P32794	780 aa		4.86	□□□□□ -1.63
YRO2	YBR054W	WHI3	P34761	661 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	YGR130C	P53278	816 aa		4.86	□□□□□ -1.63
YRO2	YBR054W	EAR1	Q03212	550 aa		4.86	□□□□□ -1.63
YRO2	YBR054W	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	YLR257W	Q06146	321 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	YOR059C	Q08448	450 aa	Known RBP	4.86	□□□□□ -1.63
YRO2	YBR054W	CDC34	P14682	295 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	RAD27	P26793	382 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	MKK2	P32491	506 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	DUT1	P33317	147 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	QNS1	P38795	714 aa	Known RBP	4.85	□□□□□ -1.63
YRO2	YBR054W	VPS53	P47061	822 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	MED7	Q08278	222 aa		4.85	□□□□□ -1.63
YRO2	YBR054W	TMA46	Q12000	345 aa	Known RBP	4.85	□□□□□ -1.63
YRO2	YBR054W	TRP3	P00937	484 aa		4.84	□□□□□ -1.63
YRO2	YBR054W	CLN2	P20438	545 aa		4.84	□□□□□ -1.63
YRO2	YBR054W	MET10	P39692	1035 aa		4.84	□□□□□ -1.63
YRO2	YBR054W	RCM1	P53972	490 aa		4.84	□□□□□ -1.63
YRO2	YBR054W	RAT1	Q02792	1006 aa	Known RBP	4.84	□□□□□ -1.63
YRO2	YBR054W	JIP5	Q06214	492 aa	Predicted RBP	4.84	□□□□□ -1.63
YRO2	YBR054W	PUS7	Q08647	676 aa	Known RBP	4.84	□□□□□ -1.63
YRO2	YBR054W	HRK1	Q08732	759 aa	Known RBP	4.84	□□□□□ -1.63
YRO2	YBR054W	PTC5	Q12511	572 aa		4.84	□□□□□ -1.63
YRO2	YBR054W	YKR073C	P36153	106 aa		4.83	□□□□□ -1.64
YRO2	YBR054W	ALG3	P38179	458 aa		4.83	□□□□□ -1.64
YRO2	YBR054W	TPP1	Q03796	238 aa		4.83	□□□□□ -1.64
YRO2	YBR054W	PIN2	Q12057	282 aa		4.83	□□□□□ -1.64
YRO2	YBR054W	YVC1	Q12324	675 aa		4.83	□□□□□ -1.64
YRO2	YBR054W	CYC7	P00045	113 aa		4.82	□□□□□ -1.64
YRO2	YBR054W	SYP1	P25623	870 aa	Known RBP	4.82	□□□□□ -1.64
YRO2	YBR054W	RER2	P35196	286 aa		4.82	□□□□□ -1.64
YRO2	YBR054W	NMD3	P38861	518 aa	Known RBP	4.82	□□□□□ -1.64
YRO2	YBR054W	MAD1	P40957	749 aa		4.82	□□□□□ -1.64
YRO2	YBR054W	OYE3	P41816	400 aa	Predicted RBP	4.82	□□□□□ -1.64
YRO2	YBR054W	NOP7	P53261	605 aa	Known RBP	4.82	□□□□□ -1.64
YRO2	YBR054W	ALO1	P54783	526 aa	Known RBP	4.82	□□□□□ -1.64
YRO2	YBR054W	VPS16	Q03308	798 aa		4.82	□□□□□ -1.64
YRO2	YBR054W	KIP1	P28742	1111 aa		4.81	□□□□□ -1.64
YRO2	YBR054W	CNN1	P43618	361 aa		4.81	□□□□□ -1.64
YRO2	YBR054W	YJL045W	P47052	634 aa		4.81	□□□□□ -1.64
YRO2	YBR054W	EEB1	Q02891	456 aa		4.81	□□□□□ -1.64
YRO2	YBR054W	NSI1	Q12457	570 aa		4.81	□□□□□ -1.64
YRO2	YBR054W	DBP5	P20449	482 aa	Known RBP	4.8	□□□□□ -1.64
YRO2	YBR054W	OMA1	P36163	345 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	TOS1	P38288	455 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	RGD1	P38339	666 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	INP52	P50942	1183 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	YGR053C	P53234	283 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	YPL260W	Q08977	551 aa		4.8	□□□□□ -1.64
YRO2	YBR054W	GCD1	P09032	578 aa	Predicted RBP	4.79	□□□□□ -1.64
YRO2	YBR054W	LYP1	P32487	611 aa		4.79	□□□□□ -1.64
YRO2	YBR054W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	RIP-Chip
YRO2	YBR054W	PEX7	P39108	375 aa		4.79	□□□□□ -1.64
YRO2	YBR054W	FAA4	P47912	694 aa	Known RBP	4.79	□□□□□ -1.64
YRO2	YBR054W	GDE1	Q02979	1223 aa		4.79	□□□□□ -1.64
YRO2	YBR054W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
YRO2	YBR054W	TIF35	Q04067	274 aa	Known RBP	4.79	□□□□□ -1.64
YRO2	YBR054W	TRE1	Q08919	783 aa		4.79	□□□□□ -1.64
YRO2	YBR054W	TRP2	P00899	507 aa	Known RBP	4.78	□□□□□ -1.64
YRO2	YBR054W	SAM35	P14693	329 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	YSC84	P32793	468 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	YHL012W	P38709	493 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	MPH1	P40562	993 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	TYW3	P53177	273 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	CWC24	P53769	259 aa		4.78	□□□□□ -1.64
YRO2	YBR054W	MAG2	Q06436	670 aa	Known RBP	4.78	□□□□□ -1.64
YRO2	YBR054W	MLS1	P30952	554 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	MDL2	P33311	773 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	GPB2	P39717	880 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	RPN3	P40016	523 aa	Known RBP	4.77	□□□□□ -1.65
YRO2	YBR054W	CTH1	P47976	325 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	HNT2	P49775	206 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	SDH1	Q00711	640 aa		4.77	□□□□□ -1.65
YRO2	YBR054W	AOS1	Q06624	347 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms