RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLN3	YAL040C	IRS4	P36115	615 aa	Known RBP	3.01	□□□□□ -1.93
CLN3	YAL040C	ESL2	P36168	1195 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	NEO1	P40527	1151 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	SPO74	P45819	413 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	SNU71	P53207	620 aa	Known RBP	3.01	□□□□□ -1.93
CLN3	YAL040C	TAF8	Q03750	510 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	URN1	Q06525	465 aa	Known RBP	3.01	□□□□□ -1.93
CLN3	YAL040C	BRE4	Q07660	1125 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	NOB1	Q08444	459 aa	Known RBP	3.01	□□□□□ -1.93
CLN3	YAL040C	ELG1	Q12050	791 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	LSO1	Q3E827	93 aa		3.01	□□□□□ -1.93
CLN3	YAL040C	CFT1	Q06632	1357 aa	Known RBP	3	□□□□□ -1.93
CLN3	YAL040C	SPE2	P21182	396 aa		3	□□□□□ -1.93
CLN3	YAL040C	BOI1	P38041	980 aa	Known RBP	3	□□□□□ -1.93
CLN3	YAL040C	AVT1	P47082	602 aa		3	□□□□□ -1.93
CLN3	YAL040C	MAK10	Q02197	733 aa		3	□□□□□ -1.93
CLN3	YAL040C	YML133C	Q03099	1374 aa		3	□□□□□ -1.93
CLN3	YAL040C	YLL067C	Q07888	1374 aa		3	□□□□□ -1.93
CLN3	YAL040C	YLL066C	Q99208	1374 aa		3	□□□□□ -1.93
CLN3	YAL040C	CYC7	P00045	113 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	FUR4	P05316	633 aa	Known RBP	2.99	□□□□□ -1.93
CLN3	YAL040C	RPB10	P22139	70 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	PSY2	P40164	858 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	RIA1	P53893	1110 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	FAR11	P53917	953 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	AOS1	Q06624	347 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	TIF6	Q12522	245 aa	Known RBP	2.99	□□□□□ -1.93
CLN3	YAL040C	TOP1	P04786	769 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	KTR2	P33550	425 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	SLD2	P34252	453 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	FET4	P40988	552 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	YJR124C	P47159	448 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	CTH1	P47976	325 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	NCE103	P53615	221 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	MAG2	Q06436	670 aa	Known RBP	2.99	□□□□□ -1.93
CLN3	YAL040C	GLO4	Q12320	285 aa		2.99	□□□□□ -1.93
CLN3	YAL040C	PPH3	P32345	308 aa		2.98	□□□□□ -1.93
CLN3	YAL040C	PAM1	P37304	830 aa	Known RBP	2.98	□□□□□ -1.93
CLN3	YAL040C	HAS1	Q03532	505 aa	Known RBP	2.98	□□□□□ -1.93
CLN3	YAL040C	SNF2	P22082	1703 aa		2.98	□□□□□ -1.93
CLN3	YAL040C	RRP5	Q05022	1729 aa	Known RBP	2.98	□□□□□ -1.93
CLN3	YAL040C	PYC2	P32327	1180 aa	Known RBP	2.97	□□□□□ -1.93
CLN3	YAL040C	ELM1	P32801	640 aa		2.97	□□□□□ -1.93
CLN3	YAL040C	YNR065C	P53751	1116 aa		2.97	□□□□□ -1.93
CLN3	YAL040C	RCM1	P53972	490 aa		2.97	□□□□□ -1.93
CLN3	YAL040C	PDS5	Q04264	1277 aa		2.97	□□□□□ -1.93
CLN3	YAL040C	GIC2	Q06648	383 aa		2.97	□□□□□ -1.93
CLN3	YAL040C	HVG1	P0CE11	249 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	ERS1	P17261	260 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	BOL3	P39724	118 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	CHZ1	P40019	153 aa	Predicted RBP	2.96	□□□□□ -1.93
CLN3	YAL040C	YMR074C	Q04773	145 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	YOR223W	Q12015	292 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	YLL054C	Q12244	843 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	NSI1	Q12457	570 aa		2.96	□□□□□ -1.93
CLN3	YAL040C	SEC3	P33332	1336 aa	Known RBP	2.96	□□□□□ -1.94
CLN3	YAL040C	URB1	P34241	1764 aa	Known RBP	2.96	□□□□□ -1.94
CLN3	YAL040C	SSF1	P38789	453 aa	Predicted RBP	2.96	□□□□□ -1.94
CLN3	YAL040C	YNR029C	P53729	429 aa	Known RBP	2.96	□□□□□ -1.94
CLN3	YAL040C	DOS2	P54858	310 aa		2.96	□□□□□ -1.94
CLN3	YAL040C	YRF1-2	P40105	1681 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	YEF3	P16521	1044 aa	Known RBP	2.95	□□□□□ -1.94
CLN3	YAL040C	THI12	P42883	340 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	THI5	P43534	340 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	THI11	P47183	340 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	UFD2	P54860	961 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	SEN54	Q02825	467 aa	Predicted RBP	2.95	□□□□□ -1.94
CLN3	YAL040C	THI13	Q07748	340 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	FKS3	Q04952	1785 aa		2.95	□□□□□ -1.94
CLN3	YAL040C	CDC3	P32457	520 aa	Known RBP	2.94	□□□□□ -1.94
CLN3	YAL040C	ECM2	P38241	364 aa	Known RBP	2.94	□□□□□ -1.94
CLN3	YAL040C	MMM1	P41800	426 aa		2.94	□□□□□ -1.94
CLN3	YAL040C	PSK1	P31374	1356 aa		2.94	□□□□□ -1.94
CLN3	YAL040C	HEM3	P28789	327 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	ENP1	P38333	483 aa	Known RBP	2.93	□□□□□ -1.94
CLN3	YAL040C	CIT3	P43635	486 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	GCV1	P48015	400 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	SDH1	Q00711	640 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	KAR5	Q04746	504 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	APC1	P53886	1748 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	GPT2	P36148	743 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	GLO3	P38682	493 aa	Known RBP	2.93	□□□□□ -1.94
CLN3	YAL040C	ECL1	P48235	211 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	RPL34A	P87262	121 aa	Predicted RBP	2.93	□□□□□ -1.94
CLN3	YAL040C	DOT1	Q04089	582 aa	Known RBP	2.93	□□□□□ -1.94
CLN3	YAL040C	YOR059C	Q08448	450 aa	Known RBP	2.93	□□□□□ -1.94
CLN3	YAL040C	AUS1	Q08409	1394 aa		2.93	□□□□□ -1.94
CLN3	YAL040C	ADE6	P38972	1358 aa	Known RBP	2.92	□□□□□ -1.94
CLN3	YAL040C	GCD1	P09032	578 aa	Predicted RBP	2.92	□□□□□ -1.94
CLN3	YAL040C	ASF1	P32447	279 aa		2.92	□□□□□ -1.94
CLN3	YAL040C	PRS1	P32895	427 aa	Known RBP	2.92	□□□□□ -1.94
CLN3	YAL040C	WHI3	P34761	661 aa	Known RBP	2.92	□□□□□ -1.94
CLN3	YAL040C	OCA5	P38738	679 aa		2.92	□□□□□ -1.94
CLN3	YAL040C	RSC4	Q02206	625 aa		2.92	□□□□□ -1.94
CLN3	YAL040C	HIM1	Q06674	414 aa		2.92	□□□□□ -1.94
CLN3	YAL040C	YIG1	Q08956	461 aa		2.92	□□□□□ -1.94
CLN3	YAL040C	POL12	P38121	705 aa	Predicted RBP	2.91	□□□□□ -1.94
CLN3	YAL040C	BRN1	P38170	754 aa		2.91	□□□□□ -1.94
CLN3	YAL040C	NIT1	P40447	199 aa		2.91	□□□□□ -1.94
CLN3	YAL040C	QDR1	P40475	563 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 92.2 ms