RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
PHGDH-234ENST00000642041 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
PHGDH-234ENST00000642041 KAT6BQ8WYB5 2073 aa23.15■■□□□ 1.3
PHGDH-234ENST00000642041 BTAF1O14981 1849 aa23.15■■□□□ 1.3
PHGDH-234ENST00000642041 SLC27A3Q5K4L6 730 aa23.14■■□□□ 1.29
PHGDH-234ENST00000642041 RGPD5Q99666 1765 aa23.14■■□□□ 1.29
PHGDH-234ENST00000642041 SRPK2P78362 688 aaKnown RBP23.13■■□□□ 1.29
PHGDH-234ENST00000642041 MRS2Q9HD23 443 aa23.13■■□□□ 1.29
PHGDH-234ENST00000642041 ADCY9O60503 1353 aa23.13■■□□□ 1.29
PHGDH-234ENST00000642041 KCNH5Q8NCM2 988 aa23.11■■□□□ 1.29
PHGDH-234ENST00000642041 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
PHGDH-234ENST00000642041 ABCC6O95255 1503 aa23.11■■□□□ 1.29
PHGDH-234ENST00000642041 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
PHGDH-234ENST00000642041 ZNF526Q8TF50 670 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-234ENST00000642041 CABP2Q9NPB3 220 aa23.09■■□□□ 1.29
PHGDH-234ENST00000642041 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
PHGDH-234ENST00000642041 INSRP06213 1382 aa23.08■■□□□ 1.29
PHGDH-234ENST00000642041 PIK3C2AO00443 1686 aa23.08■■□□□ 1.29
PHGDH-234ENST00000642041 APLP1P51693 650 aa23.07■■□□□ 1.28
PHGDH-234ENST00000642041 DNAJC5GQ8N7S2 189 aa23.05■■□□□ 1.28
PHGDH-234ENST00000642041 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
PHGDH-234ENST00000642041 IL2RBP14784 551 aa23.04■■□□□ 1.28
PHGDH-234ENST00000642041 KIF3CO14782 793 aa23.03■■□□□ 1.28
PHGDH-234ENST00000642041 SOX12O15370 315 aa23.03■■□□□ 1.28
PHGDH-234ENST00000642041 NSD2O96028 1365 aa23.02■■□□□ 1.28
PHGDH-234ENST00000642041 CD2APQ9Y5K6 639 aa23.02■■□□□ 1.28
PHGDH-234ENST00000642041 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
PHGDH-234ENST00000642041 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
PHGDH-234ENST00000642041 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
PHGDH-234ENST00000642041 KCNQ4P56696 695 aa22.99■■□□□ 1.27
PHGDH-234ENST00000642041 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
PHGDH-234ENST00000642041 NFAT5O94916 1531 aa22.98■■□□□ 1.27
PHGDH-234ENST00000642041 AMER1Q5JTC6 1135 aaPredicted RBP22.98■■□□□ 1.27
PHGDH-234ENST00000642041 ERBB3P21860 1342 aa22.98■■□□□ 1.27
PHGDH-234ENST00000642041 CGNL1Q0VF96 1302 aa22.98■■□□□ 1.27
PHGDH-234ENST00000642041 MSH5O43196 834 aa22.97■■□□□ 1.27
PHGDH-234ENST00000642041 COL23A1Q86Y22 540 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-234ENST00000642041 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-234ENST00000642041 COL13A1Q5TAT6 717 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-234ENST00000642041 HDGFL2Q7Z4V5 671 aaPredicted RBP22.95■■□□□ 1.26
PHGDH-234ENST00000642041 TTC21AQ8NDW8 1320 aa22.95■■□□□ 1.26
PHGDH-234ENST00000642041 PNISRQ8TF01 805 aaKnown RBP22.94■■□□□ 1.26
PHGDH-234ENST00000642041 CAPN15O75808 1086 aa22.93■■□□□ 1.26
PHGDH-234ENST00000642041 MSL1Q68DK7 614 aa22.93■■□□□ 1.26
PHGDH-234ENST00000642041 SLC12A5Q9H2X9 1139 aa22.93■■□□□ 1.26
PHGDH-234ENST00000642041 TOMM70O94826 608 aa22.92■■□□□ 1.26
PHGDH-234ENST00000642041 LY75O60449 1722 aa22.91■■□□□ 1.26
PHGDH-234ENST00000642041 A0A1W2PP64 1363 aa22.91■■□□□ 1.26
PHGDH-234ENST00000642041 PRELPP51888 382 aa22.91■■□□□ 1.26
PHGDH-234ENST00000642041 CC2D1BQ5T0F9 858 aaKnown RBP22.91■■□□□ 1.26
PHGDH-234ENST00000642041 FAM9BQ8IZU0 186 aa22.91■■□□□ 1.26
PHGDH-234ENST00000642041 DDX54Q8TDD1 881 aaKnown RBP22.91■■□□□ 1.26
PHGDH-234ENST00000642041 PRIM1P49642 420 aaKnown RBP22.9■■□□□ 1.26
PHGDH-234ENST00000642041 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
PHGDH-234ENST00000642041 SYTL4Q96C24 671 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-234ENST00000642041 CCNL1Q9UK58 526 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-234ENST00000642041 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
PHGDH-234ENST00000642041 NSD3Q9BZ95 1437 aa22.9■■□□□ 1.26
PHGDH-234ENST00000642041 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.26
PHGDH-234ENST00000642041 ANKRD24Q8TF21 1146 aa22.88■■□□□ 1.25
PHGDH-234ENST00000642041 MON2Q7Z3U7 1717 aa22.88■■□□□ 1.25
PHGDH-234ENST00000642041 TNS4Q8IZW8 715 aa22.87■■□□□ 1.25
PHGDH-234ENST00000642041 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
PHGDH-234ENST00000642041 JMYQ8N9B5 988 aa22.87■■□□□ 1.25
PHGDH-234ENST00000642041 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
PHGDH-234ENST00000642041 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
PHGDH-234ENST00000642041 KLRG1Q96E93 195 aa22.85■■□□□ 1.25
PHGDH-234ENST00000642041 PCNTO95613 3336 aa22.85■■□□□ 1.25
PHGDH-234ENST00000642041 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
PHGDH-234ENST00000642041 FLAD1Q8NFF5 587 aa22.84■■□□□ 1.25
PHGDH-234ENST00000642041 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
PHGDH-234ENST00000642041 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
PHGDH-234ENST00000642041 MORC1Q86VD1 984 aa22.82■■□□□ 1.24
PHGDH-234ENST00000642041 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
PHGDH-234ENST00000642041 HMGB2P26583 209 aaKnown RBP22.81■■□□□ 1.24
PHGDH-234ENST00000642041 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
PHGDH-234ENST00000642041 WWC3Q9ULE0 1092 aa22.81■■□□□ 1.24
PHGDH-234ENST00000642041 CFAP53Q96M91 514 aa22.8■■□□□ 1.24
PHGDH-234ENST00000642041 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
PHGDH-234ENST00000642041 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
PHGDH-234ENST00000642041 KIF20BQ96Q89 1820 aa22.79■■□□□ 1.24
PHGDH-234ENST00000642041 LTN1O94822 1766 aa22.78■■□□□ 1.24
PHGDH-234ENST00000642041 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
PHGDH-234ENST00000642041 CICQ96RK0 1608 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-234ENST00000642041 ANKRD26Q9UPS8 1709 aa22.76■■□□□ 1.23
PHGDH-234ENST00000642041 USP54Q70EL1 1684 aa22.75■■□□□ 1.23
PHGDH-234ENST00000642041 HTRA3P83110 453 aa22.75■■□□□ 1.23
PHGDH-234ENST00000642041 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
PHGDH-234ENST00000642041 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.75■■□□□ 1.23
PHGDH-234ENST00000642041 NMRK2Q9NPI5 230 aa22.75■■□□□ 1.23
PHGDH-234ENST00000642041 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
PHGDH-234ENST00000642041 C5P01031 1676 aa22.73■■□□□ 1.23
PHGDH-234ENST00000642041 FSTL1Q12841 308 aa22.72■■□□□ 1.23
PHGDH-234ENST00000642041 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
PHGDH-234ENST00000642041 NME9Q86XW9 330 aa22.72■■□□□ 1.23
PHGDH-234ENST00000642041 IP6K1Q92551 441 aa22.71■■□□□ 1.23
PHGDH-234ENST00000642041 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
PHGDH-234ENST00000642041 FAM208AQ9UK61 1670 aaKnown RBP22.7■■□□□ 1.22
PHGDH-234ENST00000642041 NEFLP07196 543 aa22.69■■□□□ 1.22
PHGDH-234ENST00000642041 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms