RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
PHGDH-233ENST00000642021 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
PHGDH-233ENST00000642021 SDSP20132 328 aa17.11■□□□□ 0.33
PHGDH-233ENST00000642021 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-233ENST00000642021 RTL1A6NKG5 1358 aa17.11■□□□□ 0.33
PHGDH-233ENST00000642021 MSH6P52701 1360 aa17.11■□□□□ 0.33
PHGDH-233ENST00000642021 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
PHGDH-233ENST00000642021 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
PHGDH-233ENST00000642021 SOX12O15370 315 aa17.1■□□□□ 0.33
PHGDH-233ENST00000642021 AGLP35573 1532 aa17.1■□□□□ 0.33
PHGDH-233ENST00000642021 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
PHGDH-233ENST00000642021 CLCN1P35523 988 aa17.1■□□□□ 0.33
PHGDH-233ENST00000642021 SKOR2Q2VWA4 1001 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-233ENST00000642021 ISY1Q9ULR0 285 aaKnown RBP17.1■□□□□ 0.33
PHGDH-233ENST00000642021 FOXO3O43524 673 aa17.09■□□□□ 0.33
PHGDH-233ENST00000642021 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
PHGDH-233ENST00000642021 RABEP1Q15276 862 aa17.09■□□□□ 0.33
PHGDH-233ENST00000642021 SIRT1Q96EB6 747 aa17.09■□□□□ 0.33
PHGDH-233ENST00000642021 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
PHGDH-233ENST00000642021 PKP1Q13835 747 aa17.09■□□□□ 0.33
PHGDH-233ENST00000642021 ROBO2Q9HCK4 1378 aa17.08■□□□□ 0.33
PHGDH-233ENST00000642021 ACEP12821 1306 aa17.08■□□□□ 0.33
PHGDH-233ENST00000642021 CLEC17AQ6ZS10 378 aa17.08■□□□□ 0.33
PHGDH-233ENST00000642021 G2E3Q7L622 706 aa17.08■□□□□ 0.33
PHGDH-233ENST00000642021 MON2Q7Z3U7 1717 aa17.08■□□□□ 0.33
PHGDH-233ENST00000642021 C3P01024 1663 aa17.08■□□□□ 0.32
PHGDH-233ENST00000642021 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
PHGDH-233ENST00000642021 F6X3S4 739 aa17.07■□□□□ 0.32
PHGDH-233ENST00000642021 TECPR2O15040 1411 aa17.07■□□□□ 0.32
PHGDH-233ENST00000642021 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
PHGDH-233ENST00000642021 PTPRCP08575 1304 aa17.06■□□□□ 0.32
PHGDH-233ENST00000642021 CRB1P82279 1406 aa17.06■□□□□ 0.32
PHGDH-233ENST00000642021 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
PHGDH-233ENST00000642021 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
PHGDH-233ENST00000642021 ZGPATQ8N5A5 531 aaKnown RBP17.05■□□□□ 0.32
PHGDH-233ENST00000642021 ESPNB1AK53 854 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-233ENST00000642021 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-233ENST00000642021 MTHFSDQ2M296 383 aaKnown RBP17.04■□□□□ 0.32
PHGDH-233ENST00000642021 ZMYND15Q9H091 742 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 TSPOAP1O95153 1857 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 PTMSP20962 102 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
PHGDH-233ENST00000642021 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 KLHL40Q2TBA0 621 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 MCTP1Q6DN14 999 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 AK9Q5TCS8 1911 aa17.03■□□□□ 0.32
PHGDH-233ENST00000642021 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
PHGDH-233ENST00000642021 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.32
PHGDH-233ENST00000642021 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
PHGDH-233ENST00000642021 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
PHGDH-233ENST00000642021 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
PHGDH-233ENST00000642021 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
PHGDH-233ENST00000642021 ZDHHC9Q9Y397 364 aa17.01■□□□□ 0.31
PHGDH-233ENST00000642021 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
PHGDH-233ENST00000642021 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
PHGDH-233ENST00000642021 PDE1AP54750 535 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 NUCB2P80303 420 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 NAP1L5Q96NT1 182 aaPredicted RBP17■□□□□ 0.31
PHGDH-233ENST00000642021 LMBRD1Q9NUN5 540 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 PDE4CQ08493 712 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 USP6P35125 1406 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 CASC1Q6TDU7 716 aa17■□□□□ 0.31
PHGDH-233ENST00000642021 TMEM2Q9UHN6 1383 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 LTKP29376 864 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 ADAMTS13Q76LX8 1427 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 USP31Q70CQ4 1352 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 ERC2O15083 957 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-233ENST00000642021 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
PHGDH-233ENST00000642021 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 ST18O60284 1047 aa16.98■□□□□ 0.31
PHGDH-233ENST00000642021 REC8O95072 547 aa16.98■□□□□ 0.31
PHGDH-233ENST00000642021 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
PHGDH-233ENST00000642021 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 HMMRO75330 724 aa16.98■□□□□ 0.31
PHGDH-233ENST00000642021 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
PHGDH-233ENST00000642021 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
PHGDH-233ENST00000642021 CCT4P50991 539 aaKnown RBP16.97■□□□□ 0.31
PHGDH-233ENST00000642021 EYA1Q99502 592 aa16.97■□□□□ 0.31
PHGDH-233ENST00000642021 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
PHGDH-233ENST00000642021 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
PHGDH-233ENST00000642021 TNRQ92752 1358 aa16.96■□□□□ 0.31
PHGDH-233ENST00000642021 PNMA6EA0A0J9YXQ4 647 aa16.96■□□□□ 0.31
PHGDH-233ENST00000642021 PRPF40AO75400 957 aaKnown RBP16.96■□□□□ 0.31
PHGDH-233ENST00000642021 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
PHGDH-233ENST00000642021 GNAI2P04899 355 aa16.95■□□□□ 0.3
PHGDH-233ENST00000642021 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
PHGDH-233ENST00000642021 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-233ENST00000642021 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
PHGDH-233ENST00000642021 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms