RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SIRT1Q96EB6 747 aa20.98■□□□□ 0.95
PHGDH-223ENST00000641597 KIF13AQ9H1H9 1805 aa20.98■□□□□ 0.95
PHGDH-223ENST00000641597 SLC4A10Q6U841 1118 aa20.97■□□□□ 0.95
PHGDH-223ENST00000641597 NECTIN2Q92692 538 aa20.97■□□□□ 0.95
PHGDH-223ENST00000641597 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
PHGDH-223ENST00000641597 ATP10DQ9P241 1426 aa20.97■□□□□ 0.95
PHGDH-223ENST00000641597 HSP90AB1P08238 724 aaKnown RBP20.96■□□□□ 0.95
PHGDH-223ENST00000641597 INTS3Q68E01 1043 aaKnown RBP20.96■□□□□ 0.95
PHGDH-223ENST00000641597 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
PHGDH-223ENST00000641597 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-223ENST00000641597 PLEKHG3A1L390 1219 aa20.96■□□□□ 0.95
PHGDH-223ENST00000641597 DDIT3P35638 169 aa20.96■□□□□ 0.95
PHGDH-223ENST00000641597 PANK2Q9BZ23 570 aa20.96■□□□□ 0.95
PHGDH-223ENST00000641597 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
PHGDH-223ENST00000641597 CEP85Q6P2H3 762 aa20.95■□□□□ 0.95
PHGDH-223ENST00000641597 TRAK2O60296 914 aa20.95■□□□□ 0.94
PHGDH-223ENST00000641597 TNPO1Q92973 898 aaKnown RBP20.94■□□□□ 0.94
PHGDH-223ENST00000641597 CHMP4BQ9H444 224 aaKnown RBP20.93■□□□□ 0.94
PHGDH-223ENST00000641597 CRB1P82279 1406 aa20.93■□□□□ 0.94
PHGDH-223ENST00000641597 NCOA3Q9Y6Q9 1424 aa20.93■□□□□ 0.94
PHGDH-223ENST00000641597 ANKRD44Q8N8A2 993 aa20.93■□□□□ 0.94
PHGDH-223ENST00000641597 NGDNQ8NEJ9 315 aaKnown RBP20.93■□□□□ 0.94
PHGDH-223ENST00000641597 TSHZ3Q63HK5 1081 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 SNX21Q969T3 373 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 EYA1Q99502 592 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 RGPD8O14715 1765 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-223ENST00000641597 RTL1A6NKG5 1358 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 CDC45O75419 566 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 GAS2L2Q8NHY3 880 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 RBM33Q96EV2 1170 aaKnown RBP20.92■□□□□ 0.94
PHGDH-223ENST00000641597 TSPYL4Q9UJ04 414 aa20.92■□□□□ 0.94
PHGDH-223ENST00000641597 XRCC6P12956 609 aaKnown RBP eCLIP20.92■□□□□ 0.945e-6■■□□□ 11.5
PHGDH-223ENST00000641597 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-223ENST00000641597 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
PHGDH-223ENST00000641597 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
PHGDH-223ENST00000641597 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-223ENST00000641597 AMPHP49418 695 aa20.9■□□□□ 0.94
PHGDH-223ENST00000641597 TOPAZ1Q8N9V7 1692 aa20.9■□□□□ 0.94
PHGDH-223ENST00000641597 AK9Q5TCS8 1911 aa20.89■□□□□ 0.93
PHGDH-223ENST00000641597 PLEKHG1Q9ULL1 1385 aa20.89■□□□□ 0.93
PHGDH-223ENST00000641597 SSH2Q76I76 1423 aa20.89■□□□□ 0.93
PHGDH-223ENST00000641597 USP31Q70CQ4 1352 aa20.89■□□□□ 0.93
PHGDH-223ENST00000641597 SDSP20132 328 aa20.89■□□□□ 0.93
PHGDH-223ENST00000641597 RGPD1P0DJD0 1748 aa20.88■□□□□ 0.93
PHGDH-223ENST00000641597 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
PHGDH-223ENST00000641597 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
PHGDH-223ENST00000641597 PLEKHG5O94827 1062 aa20.87■□□□□ 0.93
PHGDH-223ENST00000641597 NLRP6P59044 892 aa20.87■□□□□ 0.93
PHGDH-223ENST00000641597 USHBP1Q8N6Y0 703 aa20.87■□□□□ 0.93
PHGDH-223ENST00000641597 SSFA2P28290 1259 aa20.87■□□□□ 0.93
PHGDH-223ENST00000641597 EXOC6BQ9Y2D4 811 aa20.86■□□□□ 0.93
PHGDH-223ENST00000641597 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
PHGDH-223ENST00000641597 GOLGA6L3A6NEY3 463 aa20.86■□□□□ 0.93
PHGDH-223ENST00000641597 EID1Q9Y6B2 187 aa20.86■□□□□ 0.93
PHGDH-223ENST00000641597 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
PHGDH-223ENST00000641597 FSD2A1L4K1 749 aa20.85■□□□□ 0.93
PHGDH-223ENST00000641597 RPAP2Q8IXW5 612 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-223ENST00000641597 RAB3GAP1Q15042 981 aa20.84■□□□□ 0.93
PHGDH-223ENST00000641597 FLT4P35916 1363 aa20.83■□□□□ 0.93
PHGDH-223ENST00000641597 PTPRCP08575 1304 aa20.83■□□□□ 0.93
PHGDH-223ENST00000641597 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
PHGDH-223ENST00000641597 PKP1Q13835 747 aa20.83■□□□□ 0.92
PHGDH-223ENST00000641597 C14orf37Q86TY3 774 aa20.83■□□□□ 0.92
PHGDH-223ENST00000641597 RRAGDQ9NQL2 400 aaPredicted RBP20.83■□□□□ 0.92
PHGDH-223ENST00000641597 KIF24Q5T7B8 1368 aa20.82■□□□□ 0.92
PHGDH-223ENST00000641597 KCNA6P17658 529 aa20.82■□□□□ 0.92
PHGDH-223ENST00000641597 ARHGEF10O15013 1369 aa20.82■□□□□ 0.92
PHGDH-223ENST00000641597 SBNO1A3KN83 1393 aa20.81■□□□□ 0.92
PHGDH-223ENST00000641597 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
PHGDH-223ENST00000641597 PNMA6EA0A0J9YXQ4 647 aa20.8■□□□□ 0.92
PHGDH-223ENST00000641597 FKBP5Q13451 457 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-223ENST00000641597 GAS2L3Q86XJ1 694 aa20.8■□□□□ 0.92
PHGDH-223ENST00000641597 CHAMP1Q96JM3 812 aa20.8■□□□□ 0.92
PHGDH-223ENST00000641597 FMN2Q9NZ56 1722 aa20.8■□□□□ 0.92
PHGDH-223ENST00000641597 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
PHGDH-223ENST00000641597 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
PHGDH-223ENST00000641597 DDX11L8A8MPP1 907 aa20.79■□□□□ 0.92
PHGDH-223ENST00000641597 PIK3C2AO00443 1686 aa20.79■□□□□ 0.92
PHGDH-223ENST00000641597 KDRP35968 1356 aa20.79■□□□□ 0.92
PHGDH-223ENST00000641597 DIP2AQ14689 1571 aa20.79■□□□□ 0.92
PHGDH-223ENST00000641597 SETD1BQ9UPS6 1966 aaKnown RBP20.78■□□□□ 0.92
PHGDH-223ENST00000641597 HOXC9P31274 260 aa20.78■□□□□ 0.92
PHGDH-223ENST00000641597 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
PHGDH-223ENST00000641597 ZBTB7CA1YPR0 619 aa20.78■□□□□ 0.92
PHGDH-223ENST00000641597 FLIIQ13045 1269 aa20.78■□□□□ 0.92
PHGDH-223ENST00000641597 ABTB2Q8N961 1025 aa20.78■□□□□ 0.92
PHGDH-223ENST00000641597 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.91
PHGDH-223ENST00000641597 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.91
PHGDH-223ENST00000641597 PDE1AP54750 535 aa20.76■□□□□ 0.91
PHGDH-223ENST00000641597 TBX22Q9Y458 520 aa20.76■□□□□ 0.91
PHGDH-223ENST00000641597 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
PHGDH-223ENST00000641597 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
PHGDH-223ENST00000641597 FAM43AQ8N2R8 423 aa20.75■□□□□ 0.91
PHGDH-223ENST00000641597 PHAXQ9H814 394 aaKnown RBP20.75■□□□□ 0.91
PHGDH-223ENST00000641597 CIZ1Q9ULV3 898 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-223ENST00000641597 GBP4Q96PP9 640 aa20.74■□□□□ 0.91
PHGDH-223ENST00000641597 LRRFIP2Q9Y608 721 aaKnown RBP20.74■□□□□ 0.91
PHGDH-223ENST00000641597 GNAI2P04899 355 aa20.73■□□□□ 0.91
PHGDH-223ENST00000641597 CCT4P50991 539 aaKnown RBP20.73■□□□□ 0.91
PHGDH-223ENST00000641597 RABEP1Q15276 862 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms