RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
PTP4A1-207ENST00000639568 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
PTP4A1-207ENST00000639568 PCNTO95613 3336 aa15.98■□□□□ 0.15
PTP4A1-207ENST00000639568 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
PTP4A1-207ENST00000639568 FSTL1Q12841 308 aa15.97■□□□□ 0.15
PTP4A1-207ENST00000639568 USP47Q96K76 1375 aa15.97■□□□□ 0.15
PTP4A1-207ENST00000639568 PIK3C2AO00443 1686 aa15.96■□□□□ 0.15
PTP4A1-207ENST00000639568 ADRA2BP18089 450 aa15.94■□□□□ 0.14
PTP4A1-207ENST00000639568 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
PTP4A1-207ENST00000639568 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
PTP4A1-207ENST00000639568 RGPD5Q99666 1765 aa15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 NFAT5O94916 1531 aa15.92■□□□□ 0.14
PTP4A1-207ENST00000639568 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
PTP4A1-207ENST00000639568 AK7Q96M32 723 aa15.91■□□□□ 0.14
PTP4A1-207ENST00000639568 BCS1LQ9Y276 419 aa15.91■□□□□ 0.14
PTP4A1-207ENST00000639568 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
PTP4A1-207ENST00000639568 NSD2O96028 1365 aa15.9■□□□□ 0.14
PTP4A1-207ENST00000639568 QRICH2Q9H0J4 1663 aa15.9■□□□□ 0.14
PTP4A1-207ENST00000639568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.142e-6■□□□□ 8.6
PTP4A1-207ENST00000639568 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
PTP4A1-207ENST00000639568 PHF14O94880 888 aa15.89■□□□□ 0.13
PTP4A1-207ENST00000639568 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
PTP4A1-207ENST00000639568 PCDH10Q9P2E7 1040 aa15.89■□□□□ 0.13
PTP4A1-207ENST00000639568 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
PTP4A1-207ENST00000639568 LTV1Q96GA3 475 aaPredicted RBP15.88■□□□□ 0.13
PTP4A1-207ENST00000639568 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
PTP4A1-207ENST00000639568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
PTP4A1-207ENST00000639568 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
PTP4A1-207ENST00000639568 TGFB2P61812 414 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 LY75O60449 1722 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 PLEKHG2Q9H7P9 1386 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 NSD3Q9BZ95 1437 aa15.84■□□□□ 0.13
PTP4A1-207ENST00000639568 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.13
PTP4A1-207ENST00000639568 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
PTP4A1-207ENST00000639568 FCHSD2O94868 740 aa15.83■□□□□ 0.12
PTP4A1-207ENST00000639568 NME9Q86XW9 330 aa15.83■□□□□ 0.12
PTP4A1-207ENST00000639568 IP6K1Q92551 441 aa15.83■□□□□ 0.12
PTP4A1-207ENST00000639568 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
PTP4A1-207ENST00000639568 SSFA2P28290 1259 aa15.82■□□□□ 0.12
PTP4A1-207ENST00000639568 MMP10P09238 476 aa15.81■□□□□ 0.12
PTP4A1-207ENST00000639568 MPRIPQ6WCQ1 1025 aa15.81■□□□□ 0.12
PTP4A1-207ENST00000639568 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
PTP4A1-207ENST00000639568 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
PTP4A1-207ENST00000639568 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
PTP4A1-207ENST00000639568 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
PTP4A1-207ENST00000639568 PXDNLA1KZ92 1463 aa15.79■□□□□ 0.12
PTP4A1-207ENST00000639568 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
PTP4A1-207ENST00000639568 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
PTP4A1-207ENST00000639568 RNF181Q9P0P0 153 aa15.78■□□□□ 0.12
PTP4A1-207ENST00000639568 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
PTP4A1-207ENST00000639568 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.12
PTP4A1-207ENST00000639568 DPEP1P16444 411 aa15.77■□□□□ 0.12
PTP4A1-207ENST00000639568 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
PTP4A1-207ENST00000639568 C5P01031 1676 aa15.76■□□□□ 0.11
PTP4A1-207ENST00000639568 AMPHP49418 695 aa15.76■□□□□ 0.11
PTP4A1-207ENST00000639568 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
PTP4A1-207ENST00000639568 C10orf71Q711Q0 1435 aa15.76■□□□□ 0.11
PTP4A1-207ENST00000639568 GNPATO15228 680 aa15.75■□□□□ 0.11
PTP4A1-207ENST00000639568 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
PTP4A1-207ENST00000639568 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
PTP4A1-207ENST00000639568 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
PTP4A1-207ENST00000639568 MEGF6O75095 1541 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 TMF1P82094 1093 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 C4BP0C0L5 1744 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
PTP4A1-207ENST00000639568 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 HOXC9P31274 260 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 DALRD3Q5D0E6 543 aaKnown RBP15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 LINC00116Q8NCU8 138 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 PRDM10Q9NQV6 1147 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 USP54Q70EL1 1684 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 LTN1O94822 1766 aa15.72■□□□□ 0.11
PTP4A1-207ENST00000639568 LOC102724428A0A0B4J2F2 783 aa15.71■□□□□ 0.11
PTP4A1-207ENST00000639568 SIK1P57059 783 aa15.71■□□□□ 0.11
PTP4A1-207ENST00000639568 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
PTP4A1-207ENST00000639568 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.11
PTP4A1-207ENST00000639568 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
PTP4A1-207ENST00000639568 NBPF6Q5VWK0 638 aa15.7■□□□□ 0.1
PTP4A1-207ENST00000639568 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
PTP4A1-207ENST00000639568 NBPF4Q96M43 638 aa15.7■□□□□ 0.1
PTP4A1-207ENST00000639568 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
PTP4A1-207ENST00000639568 FOXN1O15353 648 aa15.69■□□□□ 0.1
PTP4A1-207ENST00000639568 PIGBQ92521 554 aa15.69■□□□□ 0.1
PTP4A1-207ENST00000639568 DCAF5Q96JK2 942 aa15.69■□□□□ 0.1
PTP4A1-207ENST00000639568 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
PTP4A1-207ENST00000639568 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 KCNA3P22001 575 aa15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 ATP6V1AP38606 617 aa15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 COG3Q96JB2 828 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms