RNA–Protein interactions for RNA: ENST00000638506.1

KCNMA1-236, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-236ENST00000638506 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
KCNMA1-236ENST00000638506 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
KCNMA1-236ENST00000638506 C8orf58Q8NAV2 365 aa17.24■□□□□ 0.35
KCNMA1-236ENST00000638506 SEC24BO95487 1268 aa17.24■□□□□ 0.35
KCNMA1-236ENST00000638506 USP19O94966 1318 aa17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
KCNMA1-236ENST00000638506 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
KCNMA1-236ENST00000638506 DCCP43146 1447 aa17.22■□□□□ 0.35
KCNMA1-236ENST00000638506 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-236ENST00000638506 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
KCNMA1-236ENST00000638506 KIF1AQ12756 1690 aa17.21■□□□□ 0.35
KCNMA1-236ENST00000638506 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
KCNMA1-236ENST00000638506 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 ZBTB7BO15156 539 aaPredicted RBP17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 FLT4P35916 1363 aa17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
KCNMA1-236ENST00000638506 ABCC4O15439 1325 aa17.19■□□□□ 0.34
KCNMA1-236ENST00000638506 LTN1O94822 1766 aa17.19■□□□□ 0.34
KCNMA1-236ENST00000638506 CHL1O00533 1208 aa17.18■□□□□ 0.34
KCNMA1-236ENST00000638506 BRINP3Q76B58 766 aa17.18■□□□□ 0.34
KCNMA1-236ENST00000638506 MCM10Q7L590 875 aa17.18■□□□□ 0.34
KCNMA1-236ENST00000638506 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
KCNMA1-236ENST00000638506 AMPHP49418 695 aa17.18■□□□□ 0.34
KCNMA1-236ENST00000638506 NFAT5O94916 1531 aa17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
KCNMA1-236ENST00000638506 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
KCNMA1-236ENST00000638506 NUCB1Q02818 461 aa17.16■□□□□ 0.34
KCNMA1-236ENST00000638506 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
KCNMA1-236ENST00000638506 HOXC9P31274 260 aa17.15■□□□□ 0.34
KCNMA1-236ENST00000638506 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
KCNMA1-236ENST00000638506 EYA1Q99502 592 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 KDRP35968 1356 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 CRB1P82279 1406 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 MED1Q15648 1581 aaPredicted RBP17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 PXDNQ92626 1479 aa17.14■□□□□ 0.33
KCNMA1-236ENST00000638506 GCP02774 474 aa17.13■□□□□ 0.33
KCNMA1-236ENST00000638506 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
KCNMA1-236ENST00000638506 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
KCNMA1-236ENST00000638506 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
KCNMA1-236ENST00000638506 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
KCNMA1-236ENST00000638506 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
KCNMA1-236ENST00000638506 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-236ENST00000638506 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
KCNMA1-236ENST00000638506 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 ZC3H6P61129 1189 aaKnown RBP17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
KCNMA1-236ENST00000638506 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
KCNMA1-236ENST00000638506 SLIT3O75094 1523 aa17.1■□□□□ 0.33
KCNMA1-236ENST00000638506 BECN1Q14457 450 aa17.1■□□□□ 0.33
KCNMA1-236ENST00000638506 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
KCNMA1-236ENST00000638506 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
KCNMA1-236ENST00000638506 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
KCNMA1-236ENST00000638506 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
KCNMA1-236ENST00000638506 ANKRD45Q5TZF3 282 aa17.08■□□□□ 0.33
KCNMA1-236ENST00000638506 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.33
KCNMA1-236ENST00000638506 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
KCNMA1-236ENST00000638506 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
KCNMA1-236ENST00000638506 PTPRCP08575 1304 aa17.07■□□□□ 0.32
KCNMA1-236ENST00000638506 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
KCNMA1-236ENST00000638506 ARHGEF25Q86VW2 580 aa17.07■□□□□ 0.32
KCNMA1-236ENST00000638506 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
KCNMA1-236ENST00000638506 RGS12O14924 1447 aa17.07■□□□□ 0.32
KCNMA1-236ENST00000638506 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-236ENST00000638506 NFKBIBQ15653 356 aa17.06■□□□□ 0.32
KCNMA1-236ENST00000638506 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
KCNMA1-236ENST00000638506 IP6K1Q92551 441 aa17.06■□□□□ 0.32
KCNMA1-236ENST00000638506 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
KCNMA1-236ENST00000638506 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
KCNMA1-236ENST00000638506 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
KCNMA1-236ENST00000638506 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
KCNMA1-236ENST00000638506 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
KCNMA1-236ENST00000638506 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
KCNMA1-236ENST00000638506 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
KCNMA1-236ENST00000638506 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
KCNMA1-236ENST00000638506 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
KCNMA1-236ENST00000638506 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
KCNMA1-236ENST00000638506 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
KCNMA1-236ENST00000638506 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
KCNMA1-236ENST00000638506 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
KCNMA1-236ENST00000638506 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
KCNMA1-236ENST00000638506 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
KCNMA1-236ENST00000638506 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
KCNMA1-236ENST00000638506 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
KCNMA1-236ENST00000638506 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms