RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 SLIT3O75094 1523 aa12.8□□□□□ -0.36
ATM-226ENST00000638443 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
ATM-226ENST00000638443 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
ATM-226ENST00000638443 DHX37Q8IY37 1157 aaKnown RBP12.79□□□□□ -0.36
ATM-226ENST00000638443 KDRP35968 1356 aa12.79□□□□□ -0.36
ATM-226ENST00000638443 GCP02774 474 aa12.79□□□□□ -0.36
ATM-226ENST00000638443 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
ATM-226ENST00000638443 MCM10Q7L590 875 aa12.79□□□□□ -0.36
ATM-226ENST00000638443 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
ATM-226ENST00000638443 IL16Q14005 1332 aa12.78□□□□□ -0.36
ATM-226ENST00000638443 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
ATM-226ENST00000638443 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
ATM-226ENST00000638443 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
ATM-226ENST00000638443 RTL1A6NKG5 1358 aa12.77□□□□□ -0.36
ATM-226ENST00000638443 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.36
ATM-226ENST00000638443 USP19O94966 1318 aa12.77□□□□□ -0.36
ATM-226ENST00000638443 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.37
ATM-226ENST00000638443 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
ATM-226ENST00000638443 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
ATM-226ENST00000638443 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
ATM-226ENST00000638443 MBIPQ9NS73 344 aa12.77□□□□□ -0.37
ATM-226ENST00000638443 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
ATM-226ENST00000638443 RLBP1P12271 317 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 TSPYL6Q8N831 410 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.76□□□□□ -0.37
ATM-226ENST00000638443 IP6K1Q92551 441 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
ATM-226ENST00000638443 PXDNQ92626 1479 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
ATM-226ENST00000638443 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
ATM-226ENST00000638443 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
ATM-226ENST00000638443 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
ATM-226ENST00000638443 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
ATM-226ENST00000638443 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
ATM-226ENST00000638443 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
ATM-226ENST00000638443 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
ATM-226ENST00000638443 IFT57Q9NWB7 429 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 NPHP3Q7Z494 1330 aa12.74□□□□□ -0.37
ATM-226ENST00000638443 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
ATM-226ENST00000638443 LMOD3Q0VAK6 560 aa12.73□□□□□ -0.37
ATM-226ENST00000638443 MIS18AQ9NYP9 233 aa12.73□□□□□ -0.37
ATM-226ENST00000638443 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
ATM-226ENST00000638443 GNAI1P63096 354 aa12.72□□□□□ -0.37
ATM-226ENST00000638443 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
ATM-226ENST00000638443 CRB1P82279 1406 aa12.71□□□□□ -0.37
ATM-226ENST00000638443 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
ATM-226ENST00000638443 ANKRD24Q8TF21 1146 aa12.71□□□□□ -0.38
ATM-226ENST00000638443 SLAIN2Q9P270 581 aa12.71□□□□□ -0.38
ATM-226ENST00000638443 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
ATM-226ENST00000638443 SPATA31A3Q5VYP0 1347 aa12.7□□□□□ -0.38
ATM-226ENST00000638443 VAMP4O75379 141 aa12.7□□□□□ -0.38
ATM-226ENST00000638443 TRIM27P14373 513 aa12.7□□□□□ -0.38
ATM-226ENST00000638443 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
ATM-226ENST00000638443 NOB1Q9ULX3 412 aaKnown RBP12.7□□□□□ -0.38
ATM-226ENST00000638443 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
ATM-226ENST00000638443 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
ATM-226ENST00000638443 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
ATM-226ENST00000638443 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
ATM-226ENST00000638443 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
ATM-226ENST00000638443 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
ATM-226ENST00000638443 ERBB3P21860 1342 aa12.68□□□□□ -0.38
ATM-226ENST00000638443 ZKSCAN2Q63HK3 967 aa12.68□□□□□ -0.38
ATM-226ENST00000638443 RTF1Q92541 710 aaKnown RBP12.68□□□□□ -0.38
ATM-226ENST00000638443 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
ATM-226ENST00000638443 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
ATM-226ENST00000638443 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
ATM-226ENST00000638443 CHL1O00533 1208 aa12.67□□□□□ -0.38
ATM-226ENST00000638443 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
ATM-226ENST00000638443 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
ATM-226ENST00000638443 COL18A1P39060 1754 aa12.66□□□□□ -0.38
ATM-226ENST00000638443 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
ATM-226ENST00000638443 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
ATM-226ENST00000638443 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
ATM-226ENST00000638443 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
ATM-226ENST00000638443 ATF7IPQ6VMQ6 1270 aa12.65□□□□□ -0.38
ATM-226ENST00000638443 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
ATM-226ENST00000638443 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
ATM-226ENST00000638443 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
ATM-226ENST00000638443 IGHDP01880 384 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
ATM-226ENST00000638443 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 TMEM57Q8N5G2 664 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
ATM-226ENST00000638443 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
ATM-226ENST00000638443 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
ATM-226ENST00000638443 ABCA3Q99758 1704 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms