RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 NME9Q86XW9 330 aa18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 NSFL1CQ9UNZ2 370 aaKnown RBP18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 RGS12O14924 1447 aa18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 MSH6P52701 1360 aa18.43■□□□□ 0.54
THUMPD1-206ENST00000636554 CEP85Q6P2H3 762 aa18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 ANKRD44Q8N8A2 993 aa18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 PDLIM2Q96JY6 352 aa18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
THUMPD1-206ENST00000636554 ST18O60284 1047 aa18.41■□□□□ 0.54
THUMPD1-206ENST00000636554 TMEM63CQ9P1W3 806 aa18.41■□□□□ 0.54
THUMPD1-206ENST00000636554 R3HCC1Q9Y3T6 440 aaKnown RBP18.41■□□□□ 0.54
THUMPD1-206ENST00000636554 CDK12Q9NYV4 1490 aaPredicted RBP18.41■□□□□ 0.54
THUMPD1-206ENST00000636554 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
THUMPD1-206ENST00000636554 ATP7BP35670 1465 aa18.4■□□□□ 0.54
THUMPD1-206ENST00000636554 SYCE3A1L190 88 aa18.4■□□□□ 0.54
THUMPD1-206ENST00000636554 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
THUMPD1-206ENST00000636554 MEIS3Q99687 375 aa18.39■□□□□ 0.54
THUMPD1-206ENST00000636554 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.54
THUMPD1-206ENST00000636554 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
THUMPD1-206ENST00000636554 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
THUMPD1-206ENST00000636554 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
THUMPD1-206ENST00000636554 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
THUMPD1-206ENST00000636554 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
THUMPD1-206ENST00000636554 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
THUMPD1-206ENST00000636554 AEBP1Q8IUX7 1158 aa18.37■□□□□ 0.53
THUMPD1-206ENST00000636554 NCKAP5LQ9HCH0 1330 aa18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 RNF214Q8ND24 703 aa18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 REC8O95072 547 aa18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 LRSAM1Q6UWE0 723 aa18.36■□□□□ 0.53
THUMPD1-206ENST00000636554 NPM1P06748 294 aaKnown RBP eCLIP18.35■□□□□ 0.53
THUMPD1-206ENST00000636554 ERC2O15083 957 aa18.35■□□□□ 0.53
THUMPD1-206ENST00000636554 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
THUMPD1-206ENST00000636554 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
THUMPD1-206ENST00000636554 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 NEK4P51957 841 aa18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 MCM10Q7L590 875 aa18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 TMX3Q96JJ7 454 aa18.34■□□□□ 0.53
THUMPD1-206ENST00000636554 CPS1P31327 1500 aa18.33■□□□□ 0.53
THUMPD1-206ENST00000636554 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.52
THUMPD1-206ENST00000636554 UQCRHP07919 91 aa18.33■□□□□ 0.52
THUMPD1-206ENST00000636554 TERF1P54274 439 aa18.32■□□□□ 0.52
THUMPD1-206ENST00000636554 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
THUMPD1-206ENST00000636554 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 PDE1AP54750 535 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 COG3Q96JB2 828 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 PALD1Q9ULE6 856 aa18.31■□□□□ 0.52
THUMPD1-206ENST00000636554 F6X3S4 739 aa18.3■□□□□ 0.52
THUMPD1-206ENST00000636554 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
THUMPD1-206ENST00000636554 ARID3AQ99856 593 aa18.29■□□□□ 0.52
THUMPD1-206ENST00000636554 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
THUMPD1-206ENST00000636554 EXOC6BQ9Y2D4 811 aa18.29■□□□□ 0.52
THUMPD1-206ENST00000636554 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 CHL1O00533 1208 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 BRD1O95696 1058 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
THUMPD1-206ENST00000636554 SETD1AO15047 1707 aaKnown RBP18.27■□□□□ 0.52
THUMPD1-206ENST00000636554 PTPRCP08575 1304 aa18.27■□□□□ 0.52
THUMPD1-206ENST00000636554 G2E3Q7L622 706 aa18.27■□□□□ 0.52
THUMPD1-206ENST00000636554 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.51
THUMPD1-206ENST00000636554 MBD3O95983 291 aa18.27■□□□□ 0.51
THUMPD1-206ENST00000636554 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.51
THUMPD1-206ENST00000636554 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.51
THUMPD1-206ENST00000636554 NEO1Q92859 1461 aa18.26■□□□□ 0.51
THUMPD1-206ENST00000636554 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
THUMPD1-206ENST00000636554 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
THUMPD1-206ENST00000636554 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
THUMPD1-206ENST00000636554 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
THUMPD1-206ENST00000636554 MPNDQ8N594 471 aa18.25■□□□□ 0.51
THUMPD1-206ENST00000636554 NRKQ7Z2Y5 1582 aa18.25■□□□□ 0.51
THUMPD1-206ENST00000636554 HMMRO75330 724 aa18.25■□□□□ 0.51
THUMPD1-206ENST00000636554 KIAA0232Q92628 1395 aa18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 UPF3BQ9BZI7 483 aaKnown RBP18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 CUL4AQ13619 759 aa18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 TSPY26PQ9H489 355 aa18.24■□□□□ 0.51
THUMPD1-206ENST00000636554 C3P01024 1663 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms