RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 WNK3Q9BYP7 1800 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 TRPM1Q7Z4N2 1603 aa10.84□□□□□ -0.67
SPTAN1-215ENST00000628867 QRICH2Q9H0J4 1663 aa10.83□□□□□ -0.68
SPTAN1-215ENST00000628867 TOMM70O94826 608 aa10.83□□□□□ -0.68
SPTAN1-215ENST00000628867 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.68
SPTAN1-215ENST00000628867 IGSF1Q8N6C5 1336 aa10.83□□□□□ -0.68
SPTAN1-215ENST00000628867 ROCK2O75116 1388 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-215ENST00000628867 KIAA1210Q9ULL0 1709 aa10.82□□□□□ -0.68
SPTAN1-215ENST00000628867 PHF14O94880 888 aa10.82□□□□□ -0.68
SPTAN1-215ENST00000628867 PAPPAQ13219 1627 aa10.82□□□□□ -0.68
SPTAN1-215ENST00000628867 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
SPTAN1-215ENST00000628867 KIF3CO14782 793 aa10.81□□□□□ -0.68
SPTAN1-215ENST00000628867 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
SPTAN1-215ENST00000628867 COG3Q96JB2 828 aa10.81□□□□□ -0.68
SPTAN1-215ENST00000628867 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-215ENST00000628867 ARHGAP27Q6ZUM4 889 aa10.8□□□□□ -0.68
SPTAN1-215ENST00000628867 SMARCC1Q92922 1105 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-215ENST00000628867 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
SPTAN1-215ENST00000628867 NFAT5O94916 1531 aa10.79□□□□□ -0.68
SPTAN1-215ENST00000628867 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
SPTAN1-215ENST00000628867 TNS4Q8IZW8 715 aa10.79□□□□□ -0.68
SPTAN1-215ENST00000628867 SLC12A5Q9H2X9 1139 aa10.79□□□□□ -0.68
SPTAN1-215ENST00000628867 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
SPTAN1-215ENST00000628867 HOXC9P31274 260 aa10.78□□□□□ -0.68
SPTAN1-215ENST00000628867 CGNL1Q0VF96 1302 aa10.78□□□□□ -0.68
SPTAN1-215ENST00000628867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.77□□□□□ -0.69
SPTAN1-215ENST00000628867 DNAJC5GQ8N7S2 189 aa10.77□□□□□ -0.69
SPTAN1-215ENST00000628867 CEP350Q5VT06 3117 aa10.77□□□□□ -0.69
SPTAN1-215ENST00000628867 ADCY9O60503 1353 aa10.77□□□□□ -0.69
SPTAN1-215ENST00000628867 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
SPTAN1-215ENST00000628867 COL13A1Q5TAT6 717 aaPredicted RBP10.76□□□□□ -0.69
SPTAN1-215ENST00000628867 CARD11Q9BXL7 1154 aa10.76□□□□□ -0.69
SPTAN1-215ENST00000628867 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 USHBP1Q8N6Y0 703 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 SBNO2Q9Y2G9 1366 aa10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 EDC4Q6P2E9 1401 aaKnown RBP10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 SMG6Q86US8 1419 aaKnown RBP10.75□□□□□ -0.69
SPTAN1-215ENST00000628867 GNPATO15228 680 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 FCHSD2O94868 740 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 SSFA2P28290 1259 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 TGFB2P61812 414 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 NBPF6Q5VWK0 638 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 NBPF4Q96M43 638 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 NMRK2Q9NPI5 230 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 MAP3K19Q56UN5 1328 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 NSD2O96028 1365 aa10.74□□□□□ -0.69
SPTAN1-215ENST00000628867 A0A0G2JLW4 131 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 MMP10P09238 476 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 FBLN1P23142 703 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 ATP6V1AP38606 617 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 PRELPP51888 382 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 FSTL1Q12841 308 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 TRAPPC3LQ5T215 181 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 NLGN1Q8N2Q7 840 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
SPTAN1-215ENST00000628867 HTRA3P83110 453 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 RRS1Q15050 365 aaKnown RBP10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 SMIM5Q71RC9 77 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 SIN3AQ96ST3 1273 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 PARP3Q9Y6F1 533 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 COL24A1Q17RW2 1714 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 LTN1O94822 1766 aa10.72□□□□□ -0.69
SPTAN1-215ENST00000628867 LOC102724428A0A0B4J2F2 783 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 SLC24A1O60721 1099 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 SIK1P57059 783 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 TMF1P82094 1093 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 C9orf131Q5VYM1 1079 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 TMOD3Q9NYL9 352 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 SPG7Q9UQ90 795 aa10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 RTCBQ9Y3I0 505 aaKnown RBP10.71□□□□□ -0.69
SPTAN1-215ENST00000628867 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
SPTAN1-215ENST00000628867 PIGBQ92521 554 aa10.7□□□□□ -0.7
SPTAN1-215ENST00000628867 RRAGCQ9HB90 399 aa10.7□□□□□ -0.7
SPTAN1-215ENST00000628867 LY75O60449 1722 aa10.7□□□□□ -0.7
SPTAN1-215ENST00000628867 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
SPTAN1-215ENST00000628867 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 DPEP1P16444 411 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 RFC4P35249 363 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 RNF181Q9P0P0 153 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 PIM2Q9P1W9 311 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 TUBGCP6Q96RT7 1819 aa10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 GOLGB1Q14789 3259 aaKnown RBP10.69□□□□□ -0.7
SPTAN1-215ENST00000628867 MEGF6O75095 1541 aa10.68□□□□□ -0.7
SPTAN1-215ENST00000628867 PPM1GO15355 546 aaPredicted RBP10.68□□□□□ -0.7
SPTAN1-215ENST00000628867 LINC00116Q8NCU8 138 aa10.68□□□□□ -0.7
SPTAN1-215ENST00000628867 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-215ENST00000628867 GGNBP2Q9H3C7 697 aa10.68□□□□□ -0.7
SPTAN1-215ENST00000628867 CYP27B1O15528 508 aa10.67□□□□□ -0.7
SPTAN1-215ENST00000628867 HSP90AB2PQ58FF8 381 aa10.67□□□□□ -0.7
SPTAN1-215ENST00000628867 DALRD3Q5D0E6 543 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-215ENST00000628867 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
SPTAN1-215ENST00000628867 MON2Q7Z3U7 1717 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms