RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 GPR162Q16538 588 aa12.29□□□□□ -0.44
CHD2-212ENST00000627622 POLD1P28340 1107 aa12.28□□□□□ -0.44
CHD2-212ENST00000627622 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
CHD2-212ENST00000627622 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
CHD2-212ENST00000627622 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
CHD2-212ENST00000627622 PNPLA7Q6ZV29 1317 aa12.28□□□□□ -0.44
CHD2-212ENST00000627622 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
CHD2-212ENST00000627622 C1QTNF8P60827 252 aa12.27□□□□□ -0.45
CHD2-212ENST00000627622 ANKRD36BQ8N2N9 1353 aa12.27□□□□□ -0.45
CHD2-212ENST00000627622 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
CHD2-212ENST00000627622 KCNQ4P56696 695 aa12.26□□□□□ -0.45
CHD2-212ENST00000627622 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CHD2-212ENST00000627622 COG3Q96JB2 828 aa12.26□□□□□ -0.45
CHD2-212ENST00000627622 HOXC9P31274 260 aa12.25□□□□□ -0.45
CHD2-212ENST00000627622 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
CHD2-212ENST00000627622 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
CHD2-212ENST00000627622 AMPHP49418 695 aa12.25□□□□□ -0.45
CHD2-212ENST00000627622 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
CHD2-212ENST00000627622 NSD2O96028 1365 aa12.24□□□□□ -0.45
CHD2-212ENST00000627622 FBLN1P23142 703 aa12.23□□□□□ -0.45
CHD2-212ENST00000627622 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
CHD2-212ENST00000627622 MEGF6O75095 1541 aa12.23□□□□□ -0.45
CHD2-212ENST00000627622 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
CHD2-212ENST00000627622 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
CHD2-212ENST00000627622 TESK2Q96S53 571 aa12.23□□□□□ -0.45
CHD2-212ENST00000627622 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
CHD2-212ENST00000627622 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
CHD2-212ENST00000627622 C5P01031 1676 aa12.22□□□□□ -0.45
CHD2-212ENST00000627622 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
CHD2-212ENST00000627622 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
CHD2-212ENST00000627622 USP47Q96K76 1375 aa12.21□□□□□ -0.45
CHD2-212ENST00000627622 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
CHD2-212ENST00000627622 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.45
CHD2-212ENST00000627622 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
CHD2-212ENST00000627622 NBPF6Q5VWK0 638 aa12.2□□□□□ -0.46
CHD2-212ENST00000627622 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
CHD2-212ENST00000627622 NBPF4Q96M43 638 aa12.2□□□□□ -0.46
CHD2-212ENST00000627622 ITGB4P16144 1822 aa12.2□□□□□ -0.46
CHD2-212ENST00000627622 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
CHD2-212ENST00000627622 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
CHD2-212ENST00000627622 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
CHD2-212ENST00000627622 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
CHD2-212ENST00000627622 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
CHD2-212ENST00000627622 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
CHD2-212ENST00000627622 FYB1O15117 783 aa12.18□□□□□ -0.46
CHD2-212ENST00000627622 YBX3P16989 372 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHD2-212ENST00000627622 USHBP1Q8N6Y0 703 aa12.18□□□□□ -0.46
CHD2-212ENST00000627622 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
CHD2-212ENST00000627622 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
CHD2-212ENST00000627622 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
CHD2-212ENST00000627622 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
CHD2-212ENST00000627622 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
CHD2-212ENST00000627622 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
CHD2-212ENST00000627622 UBR3Q6ZT12 1888 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 INSRP06213 1382 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 TOGARAM1Q9Y4F4 1720 aa12.15□□□□□ -0.46
CHD2-212ENST00000627622 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 TMF1P82094 1093 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 FLT4P35916 1363 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 CEP350Q5VT06 3117 aa12.14□□□□□ -0.47
CHD2-212ENST00000627622 CYP27B1O15528 508 aa12.13□□□□□ -0.47
CHD2-212ENST00000627622 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
CHD2-212ENST00000627622 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
CHD2-212ENST00000627622 ATP10DQ9P241 1426 aa12.12□□□□□ -0.47
CHD2-212ENST00000627622 AK7Q96M32 723 aa12.11□□□□□ -0.47
CHD2-212ENST00000627622 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
CHD2-212ENST00000627622 CDCA8Q53HL2 280 aa12.1□□□□□ -0.47
CHD2-212ENST00000627622 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
CHD2-212ENST00000627622 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
CHD2-212ENST00000627622 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
CHD2-212ENST00000627622 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
CHD2-212ENST00000627622 PIGBQ92521 554 aa12.09□□□□□ -0.47
CHD2-212ENST00000627622 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
CHD2-212ENST00000627622 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
CHD2-212ENST00000627622 SPG7Q9UQ90 795 aa12.08□□□□□ -0.47
CHD2-212ENST00000627622 ADCY9O60503 1353 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
CHD2-212ENST00000627622 PHF14O94880 888 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 SSFA2P28290 1259 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
CHD2-212ENST00000627622 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
CHD2-212ENST00000627622 SIK1P57059 783 aa12.07□□□□□ -0.48
CHD2-212ENST00000627622 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
CHD2-212ENST00000627622 IGSF1Q8N6C5 1336 aa12.07□□□□□ -0.48
CHD2-212ENST00000627622 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
CHD2-212ENST00000627622 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
CHD2-212ENST00000627622 KIF13BQ9NQT8 1826 aa12.06□□□□□ -0.48
CHD2-212ENST00000627622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.483e-16■□□□□ 9.1
CHD2-212ENST00000627622 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
CHD2-212ENST00000627622 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
CHD2-212ENST00000627622 ZNF526Q8TF50 670 aaPredicted RBP12.06□□□□□ -0.48
CHD2-212ENST00000627622 TMOD3Q9NYL9 352 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms