RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-208ENST00000625681 HOXC9P31274 260 aa31.92■■■□□ 2.7
UBE3A-208ENST00000625681 AMPHP49418 695 aa31.92■■■□□ 2.7
UBE3A-208ENST00000625681 GIGYF1O75420 1035 aaPredicted RBP31.91■■■□□ 2.7
UBE3A-208ENST00000625681 COG3Q96JB2 828 aa31.91■■■□□ 2.7
UBE3A-208ENST00000625681 CHD4Q14839 1912 aa31.9■■■□□ 2.7
UBE3A-208ENST00000625681 CCNL1Q9UK58 526 aaPredicted RBP31.9■■■□□ 2.7
UBE3A-208ENST00000625681 NSD2O96028 1365 aa31.9■■■□□ 2.7
UBE3A-208ENST00000625681 YBX3P16989 372 aaKnown RBP eCLIP31.88■■■□□ 2.693e-7■■■□□ 16.6
UBE3A-208ENST00000625681 COL23A1Q86Y22 540 aaPredicted RBP31.88■■■□□ 2.69
UBE3A-208ENST00000625681 PUS7Q96PZ0 661 aaKnown RBP31.86■■■□□ 2.69
UBE3A-208ENST00000625681 MSL1Q68DK7 614 aa31.85■■■□□ 2.69
UBE3A-208ENST00000625681 NBPF6Q5VWK0 638 aa31.84■■■□□ 2.69
UBE3A-208ENST00000625681 USHBP1Q8N6Y0 703 aa31.84■■■□□ 2.69
UBE3A-208ENST00000625681 NBPF4Q96M43 638 aa31.84■■■□□ 2.69
UBE3A-208ENST00000625681 CEP350Q5VT06 3117 aa31.84■■■□□ 2.69
UBE3A-208ENST00000625681 MEGF6O75095 1541 aa31.83■■■□□ 2.69
UBE3A-208ENST00000625681 RRS1Q15050 365 aaKnown RBP31.82■■■□□ 2.68
UBE3A-208ENST00000625681 TESK2Q96S53 571 aa31.81■■■□□ 2.68
UBE3A-208ENST00000625681 USP47Q96K76 1375 aa31.8■■■□□ 2.68
UBE3A-208ENST00000625681 ST20-MTHFSA0A0A6YYL1 179 aa31.79■■■□□ 2.68
UBE3A-208ENST00000625681 GRIN3BO60391 1043 aa31.79■■■□□ 2.68
UBE3A-208ENST00000625681 QSER1Q2KHR3 1735 aa31.76■■■□□ 2.67
UBE3A-208ENST00000625681 GGNBP2Q9H3C7 697 aa31.75■■■□□ 2.67
UBE3A-208ENST00000625681 COL24A1Q17RW2 1714 aa31.75■■■□□ 2.67
UBE3A-208ENST00000625681 DOT1LQ8TEK3 1739 aa31.75■■■□□ 2.67
UBE3A-208ENST00000625681 FAM208AQ9UK61 1670 aaKnown RBP31.74■■■□□ 2.67
UBE3A-208ENST00000625681 RAPGEF4Q8WZA2 1011 aa31.74■■■□□ 2.67
UBE3A-208ENST00000625681 TUBGCP6Q96RT7 1819 aa31.73■■■□□ 2.67
UBE3A-208ENST00000625681 TONSLQ96HA7 1378 aa31.72■■■□□ 2.67
UBE3A-208ENST00000625681 FYB1O15117 783 aa31.72■■■□□ 2.67
UBE3A-208ENST00000625681 TRIM26Q12899 539 aaPredicted RBP31.72■■■□□ 2.67
UBE3A-208ENST00000625681 LY75O60449 1722 aa31.71■■■□□ 2.67
UBE3A-208ENST00000625681 SHANK3Q9BYB0 1731 aa31.71■■■□□ 2.67
UBE3A-208ENST00000625681 TATP17735 454 aaPredicted RBP31.7■■■□□ 2.67
UBE3A-208ENST00000625681 HSP90AB2PQ58FF8 381 aa31.7■■■□□ 2.67
UBE3A-208ENST00000625681 MPRIPQ6WCQ1 1025 aa31.7■■■□□ 2.67
UBE3A-208ENST00000625681 CGNL1Q0VF96 1302 aa31.7■■■□□ 2.66
UBE3A-208ENST00000625681 CD2APQ9Y5K6 639 aa31.68■■■□□ 2.66
UBE3A-208ENST00000625681 RGPD2P0DJD1 1756 aa31.68■■■□□ 2.66
UBE3A-208ENST00000625681 SMIM5Q71RC9 77 aa31.67■■■□□ 2.66
UBE3A-208ENST00000625681 RTL1A6NKG5 1358 aa31.67■■■□□ 2.66
UBE3A-208ENST00000625681 ATP10DQ9P241 1426 aa31.66■■■□□ 2.66
UBE3A-208ENST00000625681 AMIGO3Q86WK7 504 aa31.65■■■□□ 2.66
UBE3A-208ENST00000625681 PALLDQ8WX93 1383 aa31.65■■■□□ 2.66
UBE3A-208ENST00000625681 WWC3Q9ULE0 1092 aa31.64■■■□□ 2.66
UBE3A-208ENST00000625681 CYP27B1O15528 508 aa31.63■■■□□ 2.65
UBE3A-208ENST00000625681 IFFO2Q5TF58 517 aa31.63■■■□□ 2.65
UBE3A-208ENST00000625681 FLAD1Q8NFF5 587 aa31.63■■■□□ 2.65
UBE3A-208ENST00000625681 SMG6Q86US8 1419 aaKnown RBP31.62■■■□□ 2.65
UBE3A-208ENST00000625681 ZNF526Q8TF50 670 aaPredicted RBP31.62■■■□□ 2.65
UBE3A-208ENST00000625681 PCDH11XQ9BZA7 1347 aa31.62■■■□□ 2.65
UBE3A-208ENST00000625681 PCDH11YQ9BZA8 1340 aa31.62■■■□□ 2.65
UBE3A-208ENST00000625681 GPBP1L1Q9HC44 474 aaPredicted RBP31.6■■■□□ 2.65
UBE3A-208ENST00000625681 SLC24A1O60721 1099 aa31.59■■■□□ 2.65
UBE3A-208ENST00000625681 PHF14O94880 888 aa31.59■■■□□ 2.65
UBE3A-208ENST00000625681 INSRP06213 1382 aa31.58■■■□□ 2.65
UBE3A-208ENST00000625681 AK7Q96M32 723 aa31.58■■■□□ 2.65
UBE3A-208ENST00000625681 PIGBQ92521 554 aa31.56■■■□□ 2.64
UBE3A-208ENST00000625681 SMARCC1Q92922 1105 aaPredicted RBP31.55■■■□□ 2.64
UBE3A-208ENST00000625681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.54■■■□□ 2.64
UBE3A-208ENST00000625681 TMF1P82094 1093 aa31.54■■■□□ 2.64
UBE3A-208ENST00000625681 HMGB2P26583 209 aaKnown RBP31.53■■■□□ 2.64
UBE3A-208ENST00000625681 EMILIN1Q9Y6C2 1016 aa31.53■■■□□ 2.64
UBE3A-208ENST00000625681 FLT4P35916 1363 aa31.53■■■□□ 2.64
UBE3A-208ENST00000625681 IGSF1Q8N6C5 1336 aa31.52■■■□□ 2.64
UBE3A-208ENST00000625681 C5P01031 1676 aa31.51■■■□□ 2.64
UBE3A-208ENST00000625681 LINC00116Q8NCU8 138 aa31.5■■■□□ 2.63
UBE3A-208ENST00000625681 PPM1GO15355 546 aaPredicted RBP31.49■■■□□ 2.63
UBE3A-208ENST00000625681 ADCY9O60503 1353 aa31.48■■■□□ 2.63
UBE3A-208ENST00000625681 CARD14Q9BXL6 1004 aa31.48■■■□□ 2.63
UBE3A-208ENST00000625681 LOC102724428A0A0B4J2F2 783 aa31.46■■■□□ 2.63
UBE3A-208ENST00000625681 HSPA6P17066 643 aa31.46■■■□□ 2.63
UBE3A-208ENST00000625681 SIK1P57059 783 aa31.46■■■□□ 2.63
UBE3A-208ENST00000625681 NKX1-1Q15270 411 aaPredicted RBP31.46■■■□□ 2.63
UBE3A-208ENST00000625681 C4BP0C0L5 1744 aa31.45■■■□□ 2.63
UBE3A-208ENST00000625681 SSFA2P28290 1259 aa31.44■■■□□ 2.62
UBE3A-208ENST00000625681 ASAP1Q9ULH1 1129 aa31.44■■■□□ 2.62
UBE3A-208ENST00000625681 SPG7Q9UQ90 795 aa31.44■■■□□ 2.62
UBE3A-208ENST00000625681 KIF24Q5T7B8 1368 aa31.43■■■□□ 2.62
UBE3A-208ENST00000625681 ITPK1Q13572 414 aa31.43■■■□□ 2.62
UBE3A-208ENST00000625681 GNPATO15228 680 aa31.41■■■□□ 2.62
UBE3A-208ENST00000625681 TMOD3Q9NYL9 352 aa31.41■■■□□ 2.62
UBE3A-208ENST00000625681 TOGARAM1Q9Y4F4 1720 aa31.41■■■□□ 2.62
UBE3A-208ENST00000625681 ATP6V1AP38606 617 aa31.4■■■□□ 2.62
UBE3A-208ENST00000625681 TAF1LQ8IZX4 1826 aa31.4■■■□□ 2.62
UBE3A-208ENST00000625681 EYA1Q99502 592 aa31.39■■■□□ 2.62
UBE3A-208ENST00000625681 KIF3CO14782 793 aa31.37■■■□□ 2.61
UBE3A-208ENST00000625681 CDCA8Q53HL2 280 aa31.37■■■□□ 2.61
UBE3A-208ENST00000625681 PCGF6Q9BYE7 350 aa31.37■■■□□ 2.61
UBE3A-208ENST00000625681 NSD3Q9BZ95 1437 aa31.37■■■□□ 2.61
UBE3A-208ENST00000625681 MMP10P09238 476 aa31.36■■■□□ 2.61
UBE3A-208ENST00000625681 ATG3Q9NT62 314 aa31.36■■■□□ 2.61
UBE3A-208ENST00000625681 WASHC2AQ641Q2 1341 aa31.34■■■□□ 2.61
UBE3A-208ENST00000625681 PHKG2P15735 406 aa31.34■■■□□ 2.61
UBE3A-208ENST00000625681 IFNL2Q8IZJ0 200 aa31.33■■■□□ 2.61
UBE3A-208ENST00000625681 NCAPD2Q15021 1401 aa31.32■■■□□ 2.61
UBE3A-208ENST00000625681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.32■■■□□ 2.6
UBE3A-208ENST00000625681 ITGB4P16144 1822 aa31.32■■■□□ 2.6
UBE3A-208ENST00000625681 A0A0G2JLW4 131 aa31.31■■■□□ 2.6
UBE3A-208ENST00000625681 UBR3Q6ZT12 1888 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms