RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
ATRX-216ENST00000624403 HMOX1P09601 288 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
ATRX-216ENST00000624403 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
ATRX-216ENST00000624403 E9PSI1 815 aa13.54□□□□□ -0.24
ATRX-216ENST00000624403 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
ATRX-216ENST00000624403 FLT4P35916 1363 aa13.54□□□□□ -0.24
ATRX-216ENST00000624403 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
ATRX-216ENST00000624403 AMPHP49418 695 aa13.53□□□□□ -0.24
ATRX-216ENST00000624403 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
ATRX-216ENST00000624403 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
ATRX-216ENST00000624403 NFAT5O94916 1531 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
ATRX-216ENST00000624403 SLIT3O75094 1523 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 NEFMP07197 916 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 PLCG2P16885 1265 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 HOXC9P31274 260 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 RIPK4P57078 832 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 DDX17Q92841 729 aaKnown RBP13.5□□□□□ -0.25
ATRX-216ENST00000624403 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
ATRX-216ENST00000624403 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
ATRX-216ENST00000624403 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 USP19O94966 1318 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
ATRX-216ENST00000624403 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 SULT6B1Q6IMI4 303 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
ATRX-216ENST00000624403 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
ATRX-216ENST00000624403 ERICH6BQ5W0A0 696 aa13.48□□□□□ -0.25
ATRX-216ENST00000624403 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 IP6K1Q92551 441 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 PXDNQ92626 1479 aa13.47□□□□□ -0.25
ATRX-216ENST00000624403 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 GCP02774 474 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.25
ATRX-216ENST00000624403 EYA1Q99502 592 aa13.46□□□□□ -0.25
ATRX-216ENST00000624403 IL16Q14005 1332 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
ATRX-216ENST00000624403 MYH16Q9H6N6 1097 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 LTN1O94822 1766 aa13.45□□□□□ -0.26
ATRX-216ENST00000624403 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
ATRX-216ENST00000624403 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
ATRX-216ENST00000624403 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
ATRX-216ENST00000624403 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 KDRP35968 1356 aa13.44□□□□□ -0.26
ATRX-216ENST00000624403 SPATA31A3Q5VYP0 1347 aa13.43□□□□□ -0.26
ATRX-216ENST00000624403 POTEMA6NI47 508 aa13.43□□□□□ -0.26
ATRX-216ENST00000624403 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
ATRX-216ENST00000624403 PLIN1O60240 522 aa13.41□□□□□ -0.26
ATRX-216ENST00000624403 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
ATRX-216ENST00000624403 THUMPD2Q9BTF0 503 aaKnown RBP13.41□□□□□ -0.26
ATRX-216ENST00000624403 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
ATRX-216ENST00000624403 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
ATRX-216ENST00000624403 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
ATRX-216ENST00000624403 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
ATRX-216ENST00000624403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.278e-7■■■□□ 17
ATRX-216ENST00000624403 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
ATRX-216ENST00000624403 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 BCAR3O75815 825 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
ATRX-216ENST00000624403 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
ATRX-216ENST00000624403 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 ANKRD24Q8TF21 1146 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
ATRX-216ENST00000624403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
ATRX-216ENST00000624403 IFT57Q9NWB7 429 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
ATRX-216ENST00000624403 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms