RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 BLOC1S2Q6QNY1 142 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 FILIP1Q7Z7B0 1213 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
C9orf139-202ENST00000623196 FAM177A1Q8N128 213 aaPredicted RBP17.61■□□□□ 0.41
C9orf139-202ENST00000623196 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 CFAP45Q9UL16 551 aa17.61■□□□□ 0.41
C9orf139-202ENST00000623196 GOLGA6L7A0A1B0GV03 622 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 TXLNBQ8N3L3 684 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 NEFHP12036 1026 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
C9orf139-202ENST00000623196 GPATCH8Q9UKJ3 1502 aaKnown RBP17.6■□□□□ 0.41
C9orf139-202ENST00000623196 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 KRT18P05783 430 aaKnown RBP17.6■□□□□ 0.41
C9orf139-202ENST00000623196 PRKCSHP14314 528 aaPredicted RBP17.6■□□□□ 0.41
C9orf139-202ENST00000623196 PDCL2Q8N4E4 241 aa17.6■□□□□ 0.41
C9orf139-202ENST00000623196 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
C9orf139-202ENST00000623196 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
C9orf139-202ENST00000623196 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
C9orf139-202ENST00000623196 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
C9orf139-202ENST00000623196 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.41
C9orf139-202ENST00000623196 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.41
C9orf139-202ENST00000623196 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.41
C9orf139-202ENST00000623196 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.4
C9orf139-202ENST00000623196 USP8P40818 1118 aa17.58■□□□□ 0.4
C9orf139-202ENST00000623196 RRS1Q15050 365 aaKnown RBP17.58■□□□□ 0.4
C9orf139-202ENST00000623196 UBXN4Q92575 508 aa17.58■□□□□ 0.4
C9orf139-202ENST00000623196 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
C9orf139-202ENST00000623196 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
C9orf139-202ENST00000623196 PLCD4Q9BRC7 762 aa17.57■□□□□ 0.4
C9orf139-202ENST00000623196 ZRSR2Q15696 482 aaKnown RBP17.57■□□□□ 0.4
C9orf139-202ENST00000623196 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
C9orf139-202ENST00000623196 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
C9orf139-202ENST00000623196 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
C9orf139-202ENST00000623196 KIF14Q15058 1648 aa17.56■□□□□ 0.4
C9orf139-202ENST00000623196 RAPGEF3O95398 923 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 C8orf34Q49A92 452 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
C9orf139-202ENST00000623196 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 KIF2AO00139 706 aaPredicted RBP17.55■□□□□ 0.4
C9orf139-202ENST00000623196 IQCEQ6IPM2 695 aa17.55■□□□□ 0.4
C9orf139-202ENST00000623196 TRIM27P14373 513 aa17.54■□□□□ 0.4
C9orf139-202ENST00000623196 KRT32Q14532 448 aa17.54■□□□□ 0.4
C9orf139-202ENST00000623196 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
C9orf139-202ENST00000623196 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
C9orf139-202ENST00000623196 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 CDKL5O76039 1030 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 NOL7Q9UMY1 257 aaKnown RBP17.53■□□□□ 0.4
C9orf139-202ENST00000623196 SYCE3A1L190 88 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
C9orf139-202ENST00000623196 CENPHQ9H3R5 247 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
C9orf139-202ENST00000623196 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
C9orf139-202ENST00000623196 SEPT7Q16181 437 aaKnown RBP17.52■□□□□ 0.4
C9orf139-202ENST00000623196 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
C9orf139-202ENST00000623196 SIL1Q9H173 461 aa17.52■□□□□ 0.4
C9orf139-202ENST00000623196 ARHGAP29Q52LW3 1261 aa17.52■□□□□ 0.4
C9orf139-202ENST00000623196 GNL3LQ9NVN8 582 aaKnown RBP17.52■□□□□ 0.4
C9orf139-202ENST00000623196 ATF3P18847 181 aa17.52■□□□□ 0.4
C9orf139-202ENST00000623196 SRGAP3O43295 1099 aa17.52■□□□□ 0.39
C9orf139-202ENST00000623196 CCDC69A6NI79 296 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
C9orf139-202ENST00000623196 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 EPB41L2O43491 1005 aaKnown RBP17.51■□□□□ 0.39
C9orf139-202ENST00000623196 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
C9orf139-202ENST00000623196 FCHSD2O94868 740 aa17.51■□□□□ 0.39
C9orf139-202ENST00000623196 NUP153P49790 1475 aaKnown RBP17.51■□□□□ 0.39
C9orf139-202ENST00000623196 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
C9orf139-202ENST00000623196 TAX1BP1Q86VP1 789 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 TESK2Q96S53 571 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
C9orf139-202ENST00000623196 CFAP100Q494V2 611 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 TAF3Q5VWG9 929 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 AACSQ86V21 672 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 STK11IPQ8N1F8 1099 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 GBP3Q9H0R5 595 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
C9orf139-202ENST00000623196 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 ZHX3Q9H4I2 956 aa17.5■□□□□ 0.39
C9orf139-202ENST00000623196 PTPN14Q15678 1187 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8802.4 ms