RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 MAP2K1Q02750 393 aaPredicted RBP7.83□□□□□ -1.16
EBF1-211ENST00000622875 RRAGCQ9HB90 399 aa7.82□□□□□ -1.16
EBF1-211ENST00000622875 PDIA4P13667 645 aaKnown RBP7.82□□□□□ -1.16
EBF1-211ENST00000622875 MCOLN1Q9GZU1 580 aa7.82□□□□□ -1.16
EBF1-211ENST00000622875 FBXO3Q9UK99 471 aa7.81□□□□□ -1.16
EBF1-211ENST00000622875 GPRASP1Q5JY77 1395 aa7.81□□□□□ -1.16
EBF1-211ENST00000622875 ADAMTSL1Q8N6G6 1762 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 UBR3Q6ZT12 1888 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 USP6P35125 1406 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 EVA1CP58658 441 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
EBF1-211ENST00000622875 VEGFBP49765 207 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 PASKQ96RG2 1323 aa7.8□□□□□ -1.16
EBF1-211ENST00000622875 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
EBF1-211ENST00000622875 LOC105371045A0A1W2PR82 267 aa7.79□□□□□ -1.16
EBF1-211ENST00000622875 UBTFP17480 764 aaKnown RBP7.79□□□□□ -1.16
EBF1-211ENST00000622875 ANKRD50Q9ULJ7 1429 aa7.79□□□□□ -1.16
EBF1-211ENST00000622875 RPGRIP1LQ68CZ1 1315 aa7.79□□□□□ -1.16
EBF1-211ENST00000622875 PLEKHH1Q9ULM0 1364 aa7.79□□□□□ -1.16
EBF1-211ENST00000622875 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
EBF1-211ENST00000622875 EIF3AQ14152 1382 aaKnown RBP7.79□□□□□ -1.16
EBF1-211ENST00000622875 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
EBF1-211ENST00000622875 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 LMOD2Q6P5Q4 547 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 RASSF10A6NK89 507 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 VGFO15240 615 aaPredicted RBP7.78□□□□□ -1.16
EBF1-211ENST00000622875 CHRNA2Q15822 529 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
EBF1-211ENST00000622875 TAF7LQ5H9L4 462 aa7.78□□□□□ -1.16
EBF1-211ENST00000622875 SLC17A8Q8NDX2 589 aa7.77□□□□□ -1.17
EBF1-211ENST00000622875 COL23A1Q86Y22 540 aaPredicted RBP7.77□□□□□ -1.17
EBF1-211ENST00000622875 MPNDQ8N594 471 aa7.77□□□□□ -1.17
EBF1-211ENST00000622875 TFCP2L1Q9NZI6 479 aa7.76□□□□□ -1.17
EBF1-211ENST00000622875 SCN4AP35499 1836 aa7.76□□□□□ -1.17
EBF1-211ENST00000622875 VPS8Q8N3P4 1428 aa7.76□□□□□ -1.17
EBF1-211ENST00000622875 HMGB2P26583 209 aaKnown RBP7.76□□□□□ -1.17
EBF1-211ENST00000622875 FLAD1Q8NFF5 587 aa7.76□□□□□ -1.17
EBF1-211ENST00000622875 PRR36Q9H6K5 1346 aa7.76□□□□□ -1.17
EBF1-211ENST00000622875 TGFB2P61812 414 aa7.75□□□□□ -1.17
EBF1-211ENST00000622875 DLEC1Q9Y238 1755 aa7.75□□□□□ -1.17
EBF1-211ENST00000622875 DOT1LQ8TEK3 1739 aa7.75□□□□□ -1.17
EBF1-211ENST00000622875 NUTM2FA1L443 756 aa7.75□□□□□ -1.17
EBF1-211ENST00000622875 RGPD5Q99666 1765 aa7.74□□□□□ -1.17
EBF1-211ENST00000622875 CA12O43570 354 aa7.74□□□□□ -1.17
EBF1-211ENST00000622875 KCNA4P22459 653 aa7.74□□□□□ -1.17
EBF1-211ENST00000622875 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
EBF1-211ENST00000622875 C4BP0C0L5 1744 aa7.74□□□□□ -1.17
EBF1-211ENST00000622875 YTHDC2Q9H6S0 1430 aaKnown RBP7.73□□□□□ -1.17
EBF1-211ENST00000622875 CCDC88AQ3V6T2 1871 aa7.73□□□□□ -1.17
EBF1-211ENST00000622875 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
EBF1-211ENST00000622875 WAPLQ7Z5K2 1190 aa7.73□□□□□ -1.17
EBF1-211ENST00000622875 NSD3Q9BZ95 1437 aa7.73□□□□□ -1.17
EBF1-211ENST00000622875 GLTPD2A6NH11 291 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 C4AP0C0L4 1744 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 LAMB4A4D0S4 1761 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 PTMSP20962 102 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 DCAF5Q96JK2 942 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 CCDC7Q96M83 1385 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 POTECB2RU33 542 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 WDR17Q8IZU2 1322 aa7.72□□□□□ -1.17
EBF1-211ENST00000622875 WDR33Q9C0J8 1336 aaKnown RBP7.72□□□□□ -1.17
EBF1-211ENST00000622875 TMEM88BA6NKF7 163 aa7.71□□□□□ -1.17
EBF1-211ENST00000622875 PCGF6Q9BYE7 350 aa7.71□□□□□ -1.17
EBF1-211ENST00000622875 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
EBF1-211ENST00000622875 ARHGAP27Q6ZUM4 889 aa7.71□□□□□ -1.18
EBF1-211ENST00000622875 TRPM7Q96QT4 1865 aa7.71□□□□□ -1.18
EBF1-211ENST00000622875 PPIP5K1Q6PFW1 1433 aa7.71□□□□□ -1.18
EBF1-211ENST00000622875 CASP8AP2Q9UKL3 1982 aa7.71□□□□□ -1.18
EBF1-211ENST00000622875 CFAP44Q96MT7 982 aa7.7□□□□□ -1.18
EBF1-211ENST00000622875 HIRIP3Q9BW71 556 aaPredicted RBP7.7□□□□□ -1.18
EBF1-211ENST00000622875 NSD2O96028 1365 aa7.7□□□□□ -1.18
EBF1-211ENST00000622875 ZC3H6P61129 1189 aaKnown RBP7.7□□□□□ -1.18
EBF1-211ENST00000622875 CARD10Q9BWT7 1032 aa7.7□□□□□ -1.18
EBF1-211ENST00000622875 POLR3AO14802 1390 aaPredicted RBP7.69□□□□□ -1.18
EBF1-211ENST00000622875 DGKZQ13574 1117 aa7.69□□□□□ -1.18
EBF1-211ENST00000622875 BRD2P25440 801 aaKnown RBP7.69□□□□□ -1.18
EBF1-211ENST00000622875 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
EBF1-211ENST00000622875 EXOC5O00471 708 aa7.68□□□□□ -1.18
EBF1-211ENST00000622875 SOX10P56693 466 aa7.68□□□□□ -1.18
EBF1-211ENST00000622875 PIK3C2GO75747 1445 aa7.68□□□□□ -1.18
EBF1-211ENST00000622875 MSL1Q68DK7 614 aa7.68□□□□□ -1.18
EBF1-211ENST00000622875 NAP1L5Q96NT1 182 aaPredicted RBP7.68□□□□□ -1.18
EBF1-211ENST00000622875 DEFB115Q30KQ5 88 aa7.67□□□□□ -1.18
EBF1-211ENST00000622875 INSRP06213 1382 aa7.67□□□□□ -1.18
EBF1-211ENST00000622875 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
EBF1-211ENST00000622875 PRDM6Q9NQX0 595 aa7.67□□□□□ -1.18
EBF1-211ENST00000622875 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
EBF1-211ENST00000622875 HOXD11P31277 338 aaPredicted RBP7.66□□□□□ -1.18
EBF1-211ENST00000622875 PLA2G5P39877 138 aa7.66□□□□□ -1.18
EBF1-211ENST00000622875 BCS1LQ9Y276 419 aa7.66□□□□□ -1.18
EBF1-211ENST00000622875 MAP2K2P36507 400 aa7.65□□□□□ -1.18
EBF1-211ENST00000622875 ITGBL1O95965 494 aaPredicted RBP7.65□□□□□ -1.18
EBF1-211ENST00000622875 ANKRD36BQ8N2N9 1353 aa7.65□□□□□ -1.18
EBF1-211ENST00000622875 MAP2P11137 1827 aaKnown RBP7.65□□□□□ -1.19
EBF1-211ENST00000622875 BEGAINQ9BUH8 593 aa7.65□□□□□ -1.19
EBF1-211ENST00000622875 KCNA3P22001 575 aa7.64□□□□□ -1.19
EBF1-211ENST00000622875 ECE1P42892 770 aa7.64□□□□□ -1.19
EBF1-211ENST00000622875 ZNF831Q5JPB2 1677 aa7.64□□□□□ -1.19
EBF1-211ENST00000622875 CPSF1Q10570 1443 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms