RNA–Protein interactions for RNA: ENST00000622048.4

PCDH15-234, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,820 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-234	ENST00000622048	ZBED2	Q9BTP6	218 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SYNDIG1	Q9H7V2	258 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SAP30BP	Q9UHR5	308 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	MRC2	Q9UBG0	1479 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	TRIM29	Q14134	588 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SMIM5	Q71RC9	77 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	DEFB132	Q7Z7B7	95 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	PHF8	Q9UPP1	1060 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	NOP2	P46087	812 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	TEX35	Q5T0J7	233 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SIRT1	Q96EB6	747 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC87	Q9NVE4	849 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	AFF2	P51816	1311 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	USP8	P40818	1118 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	RAB3GAP1	Q15042	981 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SEPT11	Q9NVA2	429 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	LRRFIP2	Q9Y608	721 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	CADPS2	Q86UW7	1296 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	TSC1	Q92574	1164 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	CDK5RAP3	Q96JB5	506 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	RRAGC	Q9HB90	399 aa		4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-234	ENST00000622048	TDO2	P48775	406 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	CPLX3	Q8WVH0	158 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	MKNK2	Q9HBH9	465 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	DHX37	Q8IY37	1157 aa	Known RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	EIF4E1B	A6NMX2	242 aa	Known RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	PPFIA3	O75145	1194 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	FMNL1	O95466	1100 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	STK3	Q13188	491 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	CAVIN4	Q5BKX8	364 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	TTLL5	Q6EMB2	1281 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	TCHP	Q9BT92	498 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	GPHN	Q9NQX3	736 aa	Predicted RBP	4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC144A	A2RUR9	1427 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	PPIP5K2	O43314	1243 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	ANKRD24	Q8TF21	1146 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	FAM161B	Q96MY7	647 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	PICK1	Q9NRD5	415 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	CPLX1	O14810	134 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC191	Q8NCU4	936 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	DIAPH3	Q9NSV4	1193 aa		4.88	□□□□□ -1.63
PCDH15-234	ENST00000622048	ANXA1	P04083	346 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CEBPZ	Q03701	1054 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	LRSAM1	Q6UWE0	723 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	UBA5	Q9GZZ9	404 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	MMRN2	Q9H8L6	949 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CGNL1	Q0VF96	1302 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	NAIP	Q13075	1403 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	TCP10L2	B9ZVM9	353 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	BBX	Q8WY36	941 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	UHRF1BP1	Q6BDS2	1440 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	GOLGA3	Q08378	1498 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048		H7C1D1	291 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	PRIM1	P49642	420 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CALD1	Q05682	793 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCAR2	Q8N163	923 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	TSHZ2	Q9NRE2	1034 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	ABL1	P00519	1130 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	IGFBP4	P22692	258 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	ERFE	Q4G0M1	354 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	MCM10	Q7L590	875 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	NIM1K	Q8IY84	436 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC144CP	Q8IYA2	1237 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	NUDT16	Q96DE0	195 aa	Known RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	TANGO6	Q9C0B7	1094 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	C2CD5	Q86YS7	1000 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	HELB	Q8NG08	1087 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	PIK3R5	Q8WYR1	880 aa		4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	GZF1	Q9H116	711 aa	Predicted RBP	4.87	□□□□□ -1.63
PCDH15-234	ENST00000622048	SLC3A2	P08195	630 aa	Known RBP	4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC158	Q5M9N0	1113 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	ORAI2	Q96SN7	254 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	PDCL3	Q9H2J4	239 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	KLF15	Q9UIH9	416 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	POLI	Q9UNA4	740 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	TNIK	Q9UKE5	1360 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	SEPT12	Q8IYM1	358 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	ZNF710	Q8N1W2	664 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	CHMP4A	Q9BY43	222 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	TRPC5	Q9UL62	973 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	FGD5	Q6ZNL6	1462 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	HSP90AB2P	Q58FF8	381 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	USP47	Q96K76	1375 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	PPP1R16B	Q96T49	567 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	CEP162	Q5TB80	1403 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	HMMR	O75330	724 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	FAM117B	Q6P1L5	589 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	RAB11FIP4	Q86YS3	637 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	ZCRB1	Q8TBF4	217 aa	Known RBP	4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	CCDC18	Q5T9S5	1454 aa		4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	KTN1	Q86UP2	1357 aa	Known RBP	4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	C11orf95	C9JLR9	678 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH15-234	ENST00000622048	IPO8	O15397	1037 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms