RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 PPLO60437 1756 aa13.15□□□□□ -0.3
CDH1-214ENST00000621016 MEIS3Q99687 375 aa13.15□□□□□ -0.31
CDH1-214ENST00000621016 IFT57Q9NWB7 429 aa13.15□□□□□ -0.31
CDH1-214ENST00000621016 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
CDH1-214ENST00000621016 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
CDH1-214ENST00000621016 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
CDH1-214ENST00000621016 PTPRMP28827 1452 aa13.14□□□□□ -0.31
CDH1-214ENST00000621016 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
CDH1-214ENST00000621016 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 SSFA2P28290 1259 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 KCNJ4P48050 445 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
CDH1-214ENST00000621016 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
CDH1-214ENST00000621016 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
CDH1-214ENST00000621016 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
CDH1-214ENST00000621016 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
CDH1-214ENST00000621016 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
CDH1-214ENST00000621016 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
CDH1-214ENST00000621016 G2E3Q7L622 706 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 MPNDQ8N594 471 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 IFT172Q9UG01 1749 aa13.12□□□□□ -0.31
CDH1-214ENST00000621016 AMPHP49418 695 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 OFD1O75665 1012 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 LMOD3Q0VAK6 560 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 ACEP12821 1306 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 RIMS2Q9UQ26 1411 aa13.11□□□□□ -0.31
CDH1-214ENST00000621016 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CDH1-214ENST00000621016 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 CDC45O75419 566 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.1□□□□□ -0.31
CDH1-214ENST00000621016 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 DTNBO60941 627 aa13.1□□□□□ -0.31
CDH1-214ENST00000621016 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
CDH1-214ENST00000621016 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH1-214ENST00000621016 KIF2CQ99661 725 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 ZC3H13Q5T200 1668 aaKnown RBP13.09□□□□□ -0.31
CDH1-214ENST00000621016 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
CDH1-214ENST00000621016 APPP05067 770 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 PKP1Q13835 747 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
CDH1-214ENST00000621016 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
CDH1-214ENST00000621016 TRIM6-TRIM34B2RNG4 842 aa13.08□□□□□ -0.31
CDH1-214ENST00000621016 MCTP1Q6DN14 999 aa13.08□□□□□ -0.31
CDH1-214ENST00000621016 GBP4Q96PP9 640 aa13.08□□□□□ -0.31
CDH1-214ENST00000621016 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.31
CDH1-214ENST00000621016 RBM25P49756 843 aaKnown RBP13.08□□□□□ -0.32
CDH1-214ENST00000621016 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.32
CDH1-214ENST00000621016 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
CDH1-214ENST00000621016 SDSP20132 328 aa13.08□□□□□ -0.32
CDH1-214ENST00000621016 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
CDH1-214ENST00000621016 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
CDH1-214ENST00000621016 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
CDH1-214ENST00000621016 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
CDH1-214ENST00000621016 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
CDH1-214ENST00000621016 MYO5BQ9ULV0 1848 aa13.07□□□□□ -0.32
CDH1-214ENST00000621016 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
CDH1-214ENST00000621016 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
CDH1-214ENST00000621016 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
CDH1-214ENST00000621016 NLRP6P59044 892 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
CDH1-214ENST00000621016 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ATP2B3Q16720 1220 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 TTC21BQ7Z4L5 1316 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ZGPATQ8N5A5 531 aaKnown RBP13.06□□□□□ -0.32
CDH1-214ENST00000621016 ARHGAP45Q92619 1136 aa13.06□□□□□ -0.32
CDH1-214ENST00000621016 ABCC4O15439 1325 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 NEO1Q92859 1461 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
CDH1-214ENST00000621016 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
CDH1-214ENST00000621016 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 LTKP29376 864 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 EP400NLQ6ZTU2 488 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
CDH1-214ENST00000621016 MSH6P52701 1360 aa13.04□□□□□ -0.32
CDH1-214ENST00000621016 GOLGA6L22H0YM25 854 aa13.04□□□□□ -0.32
CDH1-214ENST00000621016 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
CDH1-214ENST00000621016 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
CDH1-214ENST00000621016 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
CDH1-214ENST00000621016 HDGFP51858 240 aaKnown RBP13.04□□□□□ -0.32
CDH1-214ENST00000621016 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms