RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 RIMS1Q86UR5 1692 aaKnown RBP24.03■■□□□ 1.44
PCDHGB3-202ENST00000618934 NALCNQ8IZF0 1738 aa24.03■■□□□ 1.44
PCDHGB3-202ENST00000618934 CRB1P82279 1406 aa24.03■■□□□ 1.44
PCDHGB3-202ENST00000618934 SSH2Q76I76 1423 aa24.03■■□□□ 1.44
PCDHGB3-202ENST00000618934 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
PCDHGB3-202ENST00000618934 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
PCDHGB3-202ENST00000618934 ATP10DQ9P241 1426 aa24.02■■□□□ 1.44
PCDHGB3-202ENST00000618934 MTHFSDQ2M296 383 aaKnown RBP24.02■■□□□ 1.44
PCDHGB3-202ENST00000618934 GZF1Q9H116 711 aaPredicted RBP24.01■■□□□ 1.43
PCDHGB3-202ENST00000618934 KIF24Q5T7B8 1368 aa24.01■■□□□ 1.43
PCDHGB3-202ENST00000618934 MEIS3Q99687 375 aa24.01■■□□□ 1.43
PCDHGB3-202ENST00000618934 MSH6P52701 1360 aa24.01■■□□□ 1.43
PCDHGB3-202ENST00000618934 ANKRD44Q8N8A2 993 aa24■■□□□ 1.43
PCDHGB3-202ENST00000618934 RGPD8O14715 1765 aaPredicted RBP24■■□□□ 1.43
PCDHGB3-202ENST00000618934 CEP85Q6P2H3 762 aa24■■□□□ 1.43
PCDHGB3-202ENST00000618934 G2E3Q7L622 706 aa24■■□□□ 1.43
PCDHGB3-202ENST00000618934 KIAA0232Q92628 1395 aa23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 SLC4A2P04920 1241 aa23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 ARXQ96QS3 562 aa23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 APBB1O00213 710 aa23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 FOXD4L1Q9NU39 408 aa23.99■■□□□ 1.43
PCDHGB3-202ENST00000618934 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
PCDHGB3-202ENST00000618934 F6X3S4 739 aa23.96■■□□□ 1.43
PCDHGB3-202ENST00000618934 CDC45O75419 566 aa23.96■■□□□ 1.43
PCDHGB3-202ENST00000618934 HSP90AB1P08238 724 aaKnown RBP23.96■■□□□ 1.43
PCDHGB3-202ENST00000618934 EYA1Q99502 592 aa23.96■■□□□ 1.43
PCDHGB3-202ENST00000618934 TRAK2O60296 914 aa23.95■■□□□ 1.42
PCDHGB3-202ENST00000618934 TTC22Q5TAA0 569 aa23.95■■□□□ 1.42
PCDHGB3-202ENST00000618934 NGDNQ8NEJ9 315 aaKnown RBP23.95■■□□□ 1.42
PCDHGB3-202ENST00000618934 EID1Q9Y6B2 187 aa23.94■■□□□ 1.42
PCDHGB3-202ENST00000618934 CEP170BQ9Y4F5 1589 aaPredicted RBP23.94■■□□□ 1.42
PCDHGB3-202ENST00000618934 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
PCDHGB3-202ENST00000618934 ARHGEF10O15013 1369 aa23.94■■□□□ 1.42
PCDHGB3-202ENST00000618934 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
PCDHGB3-202ENST00000618934 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
PCDHGB3-202ENST00000618934 PTPRCP08575 1304 aa23.93■■□□□ 1.42
PCDHGB3-202ENST00000618934 RPAP2Q8IXW5 612 aaPredicted RBP23.93■■□□□ 1.42
PCDHGB3-202ENST00000618934 TNPO1Q92973 898 aaKnown RBP23.93■■□□□ 1.42
PCDHGB3-202ENST00000618934 AMPHP49418 695 aa23.92■■□□□ 1.42
PCDHGB3-202ENST00000618934 SLC4A10Q6U841 1118 aa23.92■■□□□ 1.42
PCDHGB3-202ENST00000618934 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
PCDHGB3-202ENST00000618934 SBNO1A3KN83 1393 aa23.91■■□□□ 1.42
PCDHGB3-202ENST00000618934 FLT4P35916 1363 aa23.91■■□□□ 1.42
PCDHGB3-202ENST00000618934 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
PCDHGB3-202ENST00000618934 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
PCDHGB3-202ENST00000618934 GAS2L2Q8NHY3 880 aa23.9■■□□□ 1.42
PCDHGB3-202ENST00000618934 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
PCDHGB3-202ENST00000618934 KDRP35968 1356 aa23.89■■□□□ 1.42
PCDHGB3-202ENST00000618934 K7ELQ4 463 aaPredicted RBP23.89■■□□□ 1.42
PCDHGB3-202ENST00000618934 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
PCDHGB3-202ENST00000618934 FSD2A1L4K1 749 aa23.89■■□□□ 1.41
PCDHGB3-202ENST00000618934 XRCC6P12956 609 aaKnown RBP eCLIP23.89■■□□□ 1.41
PCDHGB3-202ENST00000618934 SDSP20132 328 aa23.89■■□□□ 1.41
PCDHGB3-202ENST00000618934 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.41
PCDHGB3-202ENST00000618934 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
PCDHGB3-202ENST00000618934 NLRP6P59044 892 aa23.88■■□□□ 1.41
PCDHGB3-202ENST00000618934 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
PCDHGB3-202ENST00000618934 RAB3GAP1Q15042 981 aa23.87■■□□□ 1.41
PCDHGB3-202ENST00000618934 USP26Q9BXU7 913 aa23.86■■□□□ 1.41
PCDHGB3-202ENST00000618934 HSP90AA1P07900 732 aaKnown RBP23.85■■□□□ 1.41
PCDHGB3-202ENST00000618934 L1TD1Q5T7N2 865 aaKnown RBP23.85■■□□□ 1.41
PCDHGB3-202ENST00000618934 PANK2Q9BZ23 570 aa23.85■■□□□ 1.41
PCDHGB3-202ENST00000618934 ARHGAP23Q9P227 1491 aa23.85■■□□□ 1.41
PCDHGB3-202ENST00000618934 SLIT1O75093 1534 aa23.85■■□□□ 1.41
PCDHGB3-202ENST00000618934 GOLGA6L3A6NEY3 463 aa23.84■■□□□ 1.41
PCDHGB3-202ENST00000618934 CIZ1Q9ULV3 898 aaPredicted RBP23.84■■□□□ 1.41
PCDHGB3-202ENST00000618934 AK9Q5TCS8 1911 aa23.83■■□□□ 1.41
PCDHGB3-202ENST00000618934 DDX11L8A8MPP1 907 aa23.83■■□□□ 1.41
PCDHGB3-202ENST00000618934 LTV1Q96GA3 475 aaPredicted RBP23.83■■□□□ 1.41
PCDHGB3-202ENST00000618934 KCNA6P17658 529 aa23.82■■□□□ 1.4
PCDHGB3-202ENST00000618934 HOXC9P31274 260 aa23.82■■□□□ 1.4
PCDHGB3-202ENST00000618934 SSFA2P28290 1259 aa23.81■■□□□ 1.4
PCDHGB3-202ENST00000618934 TSHZ3Q63HK5 1081 aa23.81■■□□□ 1.4
PCDHGB3-202ENST00000618934 IL17REQ8NFR9 667 aa23.81■■□□□ 1.4
PCDHGB3-202ENST00000618934 EXOC6BQ9Y2D4 811 aa23.81■■□□□ 1.4
PCDHGB3-202ENST00000618934 CCT4P50991 539 aaKnown RBP23.8■■□□□ 1.4
PCDHGB3-202ENST00000618934 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.8■■□□□ 1.4
PCDHGB3-202ENST00000618934 USHBP1Q8N6Y0 703 aa23.79■■□□□ 1.4
PCDHGB3-202ENST00000618934 MARF1Q9Y4F3 1742 aaKnown RBP23.79■■□□□ 1.4
PCDHGB3-202ENST00000618934 GNAT3A8MTJ3 354 aa23.79■■□□□ 1.4
PCDHGB3-202ENST00000618934 FLIIQ13045 1269 aa23.79■■□□□ 1.4
PCDHGB3-202ENST00000618934 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
PCDHGB3-202ENST00000618934 PNMA6EA0A0J9YXQ4 647 aa23.77■■□□□ 1.4
PCDHGB3-202ENST00000618934 PDE1AP54750 535 aa23.77■■□□□ 1.4
PCDHGB3-202ENST00000618934 RABEP1Q15276 862 aa23.77■■□□□ 1.4
PCDHGB3-202ENST00000618934 THEMISQ8N1K5 641 aaPredicted RBP23.77■■□□□ 1.4
PCDHGB3-202ENST00000618934 STK31Q9BXU1 1019 aa23.77■■□□□ 1.4
PCDHGB3-202ENST00000618934 FKBP5Q13451 457 aaPredicted RBP23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 FAM43AQ8N2R8 423 aa23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 HMMRO75330 724 aa23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 GNAI2P04899 355 aa23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
PCDHGB3-202ENST00000618934 GBP4Q96PP9 640 aa23.75■■□□□ 1.39
PCDHGB3-202ENST00000618934 LRRC37A3O60309 1634 aa23.75■■□□□ 1.39
PCDHGB3-202ENST00000618934 XRN1Q8IZH2 1706 aaKnown RBP23.74■■□□□ 1.39
PCDHGB3-202ENST00000618934 RRAGDQ9NQL2 400 aaPredicted RBP23.74■■□□□ 1.39
PCDHGB3-202ENST00000618934 HTATSF1O43719 755 aaKnown RBP23.73■■□□□ 1.39
PCDHGB3-202ENST00000618934 CCDC30Q5VVM6 783 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms