RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 APBB1O00213 710 aa29.61■■■□□ 2.33
GTF2IP1-204ENST00000616377 KRT24Q2M2I5 525 aa29.61■■■□□ 2.33
GTF2IP1-204ENST00000616377 CEP85Q6P2H3 762 aa29.61■■■□□ 2.33
GTF2IP1-204ENST00000616377 TPM2P07951 284 aa29.59■■■□□ 2.33
GTF2IP1-204ENST00000616377 RGS12O14924 1447 aa29.59■■■□□ 2.33
GTF2IP1-204ENST00000616377 KIAA1211Q6ZU35 1233 aa29.59■■■□□ 2.33
GTF2IP1-204ENST00000616377 EDC4Q6P2E9 1401 aaKnown RBP29.59■■■□□ 2.33
GTF2IP1-204ENST00000616377 RPAP2Q8IXW5 612 aaPredicted RBP29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 CPSF1Q10570 1443 aaKnown RBP29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 RBSNQ9H1K0 784 aa29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 CWC22Q9HCG8 908 aaKnown RBP29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 STAG3Q9UJ98 1225 aa29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 ZDHHC9Q9Y397 364 aa29.58■■■□□ 2.33
GTF2IP1-204ENST00000616377 AATKQ6ZMQ8 1374 aa29.57■■■□□ 2.32
GTF2IP1-204ENST00000616377 ST18O60284 1047 aa29.57■■■□□ 2.32
GTF2IP1-204ENST00000616377 PRPF40AO75400 957 aaKnown RBP29.57■■■□□ 2.32
GTF2IP1-204ENST00000616377 GPT2Q8TD30 523 aa29.56■■■□□ 2.32
GTF2IP1-204ENST00000616377 MSNP26038 577 aaKnown RBP29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 CASC1Q6TDU7 716 aa29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 RTL1A6NKG5 1358 aa29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 MSH6P52701 1360 aa29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 PRIM1P49642 420 aaKnown RBP29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 RBM27Q9P2N5 1060 aaKnown RBP29.55■■■□□ 2.32
GTF2IP1-204ENST00000616377 CHAMP1Q96JM3 812 aa29.54■■■□□ 2.32
GTF2IP1-204ENST00000616377 OFD1O75665 1012 aa29.54■■■□□ 2.32
GTF2IP1-204ENST00000616377 FAM69CQ0P6D2 419 aa29.54■■■□□ 2.32
GTF2IP1-204ENST00000616377 COG3Q96JB2 828 aa29.54■■■□□ 2.32
GTF2IP1-204ENST00000616377 MEIS3Q99687 375 aa29.54■■■□□ 2.32
GTF2IP1-204ENST00000616377 DLC1Q96QB1 1528 aa29.53■■■□□ 2.32
GTF2IP1-204ENST00000616377 NCKAP5LQ9HCH0 1330 aa29.52■■■□□ 2.32
GTF2IP1-204ENST00000616377 RICTORQ6R327 1708 aa29.52■■■□□ 2.32
GTF2IP1-204ENST00000616377 AEBP1Q8IUX7 1158 aa29.52■■■□□ 2.32
GTF2IP1-204ENST00000616377 VSIG10Q8N0Z9 540 aa29.51■■■□□ 2.31
GTF2IP1-204ENST00000616377 WASLO00401 505 aaPredicted RBP29.51■■■□□ 2.31
GTF2IP1-204ENST00000616377 CPS1P31327 1500 aa29.5■■■□□ 2.31
GTF2IP1-204ENST00000616377 REC8O95072 547 aa29.5■■■□□ 2.31
GTF2IP1-204ENST00000616377 DIP2BQ9P265 1576 aa29.49■■■□□ 2.31
GTF2IP1-204ENST00000616377 PDLIM2Q96JY6 352 aa29.49■■■□□ 2.31
GTF2IP1-204ENST00000616377 CHL1O00533 1208 aa29.48■■■□□ 2.31
GTF2IP1-204ENST00000616377 ERC2O15083 957 aa29.48■■■□□ 2.31
GTF2IP1-204ENST00000616377 MCM10Q7L590 875 aa29.48■■■□□ 2.31
GTF2IP1-204ENST00000616377 HS1BP3Q53T59 392 aa29.47■■■□□ 2.31
GTF2IP1-204ENST00000616377 TMEM63CQ9P1W3 806 aa29.46■■■□□ 2.31
GTF2IP1-204ENST00000616377 NSFL1CQ9UNZ2 370 aaKnown RBP29.46■■■□□ 2.31
GTF2IP1-204ENST00000616377 SULT6B1Q6IMI4 303 aa29.46■■■□□ 2.31
GTF2IP1-204ENST00000616377 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.46■■■□□ 2.31
GTF2IP1-204ENST00000616377 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.45■■■□□ 2.31
GTF2IP1-204ENST00000616377 NUDT16Q96DE0 195 aaKnown RBP29.45■■■□□ 2.31
GTF2IP1-204ENST00000616377 NOL7Q9UMY1 257 aaKnown RBP29.45■■■□□ 2.31
GTF2IP1-204ENST00000616377 FOXD4L5Q5VV16 416 aaPredicted RBP29.45■■■□□ 2.3
GTF2IP1-204ENST00000616377 FOXD4L4Q8WXT5 416 aaPredicted RBP29.45■■■□□ 2.3
GTF2IP1-204ENST00000616377 PTPRCP08575 1304 aa29.45■■■□□ 2.3
GTF2IP1-204ENST00000616377 HAP1P54257 671 aaPredicted RBP29.44■■■□□ 2.3
GTF2IP1-204ENST00000616377 EIF4A2Q14240 407 aaKnown RBP29.43■■■□□ 2.3
GTF2IP1-204ENST00000616377 SYCE3A1L190 88 aa29.42■■■□□ 2.3
GTF2IP1-204ENST00000616377 LRSAM1Q6UWE0 723 aa29.42■■■□□ 2.3
GTF2IP1-204ENST00000616377 KIAA0232Q92628 1395 aa29.42■■■□□ 2.3
GTF2IP1-204ENST00000616377 SETD1AO15047 1707 aaKnown RBP29.42■■■□□ 2.3
GTF2IP1-204ENST00000616377 PDE1AP54750 535 aa29.41■■■□□ 2.3
GTF2IP1-204ENST00000616377 SLC4A2P04920 1241 aa29.41■■■□□ 2.3
GTF2IP1-204ENST00000616377 NEK4P51957 841 aa29.41■■■□□ 2.3
GTF2IP1-204ENST00000616377 TSPOAP1O95153 1857 aa29.41■■■□□ 2.3
GTF2IP1-204ENST00000616377 TMX3Q96JJ7 454 aa29.41■■■□□ 2.3
GTF2IP1-204ENST00000616377 OSBPL3Q9H4L5 887 aa29.4■■■□□ 2.3
GTF2IP1-204ENST00000616377 TXNDC2Q86VQ3 553 aa29.4■■■□□ 2.3
GTF2IP1-204ENST00000616377 ZMYND15Q9H091 742 aa29.4■■■□□ 2.3
GTF2IP1-204ENST00000616377 A2ML1A8K2U0 1454 aa29.39■■■□□ 2.3
GTF2IP1-204ENST00000616377 ZNF500O60304 480 aaPredicted RBP29.39■■■□□ 2.3
GTF2IP1-204ENST00000616377 CCDC61Q9Y6R9 512 aa29.39■■■□□ 2.3
GTF2IP1-204ENST00000616377 TSHZ3Q63HK5 1081 aa29.39■■■□□ 2.29
GTF2IP1-204ENST00000616377 PDCL3Q9H2J4 239 aa29.39■■■□□ 2.29
GTF2IP1-204ENST00000616377 XPCQ01831 940 aaPredicted RBP29.38■■■□□ 2.29
GTF2IP1-204ENST00000616377 R3HCC1Q9Y3T6 440 aaKnown RBP29.38■■■□□ 2.29
GTF2IP1-204ENST00000616377 HMMRO75330 724 aa29.38■■■□□ 2.29
GTF2IP1-204ENST00000616377 MON2Q7Z3U7 1717 aa29.37■■■□□ 2.29
GTF2IP1-204ENST00000616377 F6X3S4 739 aa29.37■■■□□ 2.29
GTF2IP1-204ENST00000616377 SLC4A10Q6U841 1118 aa29.37■■■□□ 2.29
GTF2IP1-204ENST00000616377 MIS18AQ9NYP9 233 aa29.37■■■□□ 2.29
GTF2IP1-204ENST00000616377 TERF1P54274 439 aa29.36■■■□□ 2.29
GTF2IP1-204ENST00000616377 G2E3Q7L622 706 aa29.36■■■□□ 2.29
GTF2IP1-204ENST00000616377 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.36■■■□□ 2.29
GTF2IP1-204ENST00000616377 METP08581 1390 aa29.35■■■□□ 2.29
GTF2IP1-204ENST00000616377 EXOC6BQ9Y2D4 811 aa29.34■■■□□ 2.29
GTF2IP1-204ENST00000616377 ZKSCAN5Q9Y2L8 839 aa29.34■■■□□ 2.29
GTF2IP1-204ENST00000616377 C3P01024 1663 aa29.34■■■□□ 2.29
GTF2IP1-204ENST00000616377 NRKQ7Z2Y5 1582 aa29.34■■■□□ 2.29
GTF2IP1-204ENST00000616377 BRD1O95696 1058 aa29.33■■■□□ 2.29
GTF2IP1-204ENST00000616377 PALD1Q9ULE6 856 aa29.33■■■□□ 2.29
GTF2IP1-204ENST00000616377 RBM10P98175 930 aaKnown RBP29.32■■■□□ 2.28
GTF2IP1-204ENST00000616377 ESYT1Q9BSJ8 1104 aa29.32■■■□□ 2.28
GTF2IP1-204ENST00000616377 CRB1P82279 1406 aa29.32■■■□□ 2.28
GTF2IP1-204ENST00000616377 MBD3O95983 291 aa29.32■■■□□ 2.28
GTF2IP1-204ENST00000616377 RNF214Q8ND24 703 aa29.32■■■□□ 2.28
GTF2IP1-204ENST00000616377 CUL4AQ13619 759 aa29.31■■■□□ 2.28
GTF2IP1-204ENST00000616377 PKNOX2Q96KN3 472 aa29.31■■■□□ 2.28
GTF2IP1-204ENST00000616377 NOL8Q76FK4 1167 aaKnown RBP29.3■■■□□ 2.28
GTF2IP1-204ENST00000616377 SALL3Q9BXA9 1300 aa29.3■■■□□ 2.28
GTF2IP1-204ENST00000616377 PRR36Q9H6K5 1346 aa29.3■■■□□ 2.28
GTF2IP1-204ENST00000616377 MCM2P49736 904 aa29.29■■■□□ 2.28
GTF2IP1-204ENST00000616377 HSP90AB2PQ58FF8 381 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms