RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
SEMA6C-209ENST00000613223 USP19O94966 1318 aa22.84■■□□□ 1.25
SEMA6C-209ENST00000613223 LTV1Q96GA3 475 aaPredicted RBP22.83■■□□□ 1.25
SEMA6C-209ENST00000613223 HTATSF1O43719 755 aaKnown RBP22.83■■□□□ 1.24
SEMA6C-209ENST00000613223 ARHGAP45Q92619 1136 aa22.83■■□□□ 1.24
SEMA6C-209ENST00000613223 PCDHB15Q9Y5E8 787 aa22.83■■□□□ 1.24
SEMA6C-209ENST00000613223 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
SEMA6C-209ENST00000613223 ITPRIPQ8IWB1 547 aa22.82■■□□□ 1.24
SEMA6C-209ENST00000613223 KIAA0232Q92628 1395 aa22.82■■□□□ 1.24
SEMA6C-209ENST00000613223 ELL2O00472 640 aaPredicted RBP22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 GCP02774 474 aa22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 HAP1P54257 671 aaPredicted RBP22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 PDE4AP27815 886 aa22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
SEMA6C-209ENST00000613223 KDM4FA0A1W2PPD8 638 aa22.8■■□□□ 1.24
SEMA6C-209ENST00000613223 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
SEMA6C-209ENST00000613223 BACH2Q9BYV9 841 aa22.8■■□□□ 1.24
SEMA6C-209ENST00000613223 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
SEMA6C-209ENST00000613223 LMOD2Q6P5Q4 547 aa22.78■■□□□ 1.24
SEMA6C-209ENST00000613223 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
SEMA6C-209ENST00000613223 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
SEMA6C-209ENST00000613223 MSH6P52701 1360 aa22.77■■□□□ 1.24
SEMA6C-209ENST00000613223 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
SEMA6C-209ENST00000613223 GNAT3A8MTJ3 354 aa22.77■■□□□ 1.24
SEMA6C-209ENST00000613223 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
SEMA6C-209ENST00000613223 ZBTB7CA1YPR0 619 aa22.76■■□□□ 1.23
SEMA6C-209ENST00000613223 USHBP1Q8N6Y0 703 aa22.76■■□□□ 1.23
SEMA6C-209ENST00000613223 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
SEMA6C-209ENST00000613223 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
SEMA6C-209ENST00000613223 ZBTB40Q9NUA8 1239 aa22.74■■□□□ 1.23
SEMA6C-209ENST00000613223 TSPYL4Q9UJ04 414 aa22.74■■□□□ 1.23
SEMA6C-209ENST00000613223 ABCC4O15439 1325 aa22.74■■□□□ 1.23
SEMA6C-209ENST00000613223 XIRP1Q702N8 1843 aaKnown RBP22.74■■□□□ 1.23
SEMA6C-209ENST00000613223 RGS3P49796 1198 aa22.73■■□□□ 1.23
SEMA6C-209ENST00000613223 API5Q9BZZ5 524 aaKnown RBP22.73■■□□□ 1.23
SEMA6C-209ENST00000613223 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
SEMA6C-209ENST00000613223 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
SEMA6C-209ENST00000613223 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
SEMA6C-209ENST00000613223 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
SEMA6C-209ENST00000613223 RGPD2P0DJD1 1756 aa22.72■■□□□ 1.23
SEMA6C-209ENST00000613223 CHMP4BQ9H444 224 aaKnown RBP22.72■■□□□ 1.23
SEMA6C-209ENST00000613223 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
SEMA6C-209ENST00000613223 CAMTA1Q9Y6Y1 1673 aa22.71■■□□□ 1.23
SEMA6C-209ENST00000613223 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
SEMA6C-209ENST00000613223 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 DEKP35659 375 aaKnown RBP22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 IL17REQ8NFR9 667 aa22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 ANKRD24Q8TF21 1146 aa22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 LRRC59Q96AG4 307 aaKnown RBP22.69■■□□□ 1.22
SEMA6C-209ENST00000613223 TNS3Q68CZ2 1445 aa22.68■■□□□ 1.22
SEMA6C-209ENST00000613223 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
SEMA6C-209ENST00000613223 PXDNQ92626 1479 aa22.68■■□□□ 1.22
SEMA6C-209ENST00000613223 DDX17Q92841 729 aaKnown RBP22.67■■□□□ 1.22
SEMA6C-209ENST00000613223 ZBTB7BO15156 539 aaPredicted RBP22.66■■□□□ 1.22
SEMA6C-209ENST00000613223 NBR1Q14596 966 aa22.66■■□□□ 1.22
SEMA6C-209ENST00000613223 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 PDZRN3Q9UPQ7 1066 aa22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 PTPRCP08575 1304 aa22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 TAF7Q15545 349 aaPredicted RBP22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 AXIN2Q9Y2T1 843 aa22.65■■□□□ 1.22
SEMA6C-209ENST00000613223 RGS12O14924 1447 aa22.64■■□□□ 1.22
SEMA6C-209ENST00000613223 SOS1Q07889 1333 aaPredicted RBP22.64■■□□□ 1.21
SEMA6C-209ENST00000613223 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
SEMA6C-209ENST00000613223 AMOTQ4VCS5 1084 aa22.63■■□□□ 1.21
SEMA6C-209ENST00000613223 PLEKHO1Q53GL0 409 aaPredicted RBP22.63■■□□□ 1.21
SEMA6C-209ENST00000613223 RGPD5Q99666 1765 aa22.63■■□□□ 1.21
SEMA6C-209ENST00000613223 ZC3H6P61129 1189 aaKnown RBP22.63■■□□□ 1.21
SEMA6C-209ENST00000613223 ERBB3P21860 1342 aa22.62■■□□□ 1.21
SEMA6C-209ENST00000613223 ABCC6O95255 1503 aa22.62■■□□□ 1.21
SEMA6C-209ENST00000613223 SPATA31A3Q5VYP0 1347 aa22.62■■□□□ 1.21
SEMA6C-209ENST00000613223 AKAP4Q5JQC9 854 aa22.61■■□□□ 1.21
SEMA6C-209ENST00000613223 SMC5Q8IY18 1101 aa22.61■■□□□ 1.21
SEMA6C-209ENST00000613223 CRYBG1Q9Y4K1 1723 aa22.61■■□□□ 1.21
SEMA6C-209ENST00000613223 INTS3Q68E01 1043 aaKnown RBP22.61■■□□□ 1.21
SEMA6C-209ENST00000613223 ZNF335Q9H4Z2 1342 aaPredicted RBP22.61■■□□□ 1.21
SEMA6C-209ENST00000613223 ZNF530Q6P9A1 599 aaPredicted RBP22.6■■□□□ 1.21
SEMA6C-209ENST00000613223 BRINP3Q76B58 766 aa22.6■■□□□ 1.21
SEMA6C-209ENST00000613223 SLC4A2P04920 1241 aa22.59■■□□□ 1.21
SEMA6C-209ENST00000613223 FAM208AQ9UK61 1670 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-209ENST00000613223 COL18A1P39060 1754 aa22.59■■□□□ 1.21
SEMA6C-209ENST00000613223 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-209ENST00000613223 NPM2Q86SE8 214 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-209ENST00000613223 OVOS2A0A0G2JMS6 1433 aa22.58■■□□□ 1.21
SEMA6C-209ENST00000613223 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
SEMA6C-209ENST00000613223 STK31Q9BXU1 1019 aa22.57■■□□□ 1.2
SEMA6C-209ENST00000613223 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
SEMA6C-209ENST00000613223 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
SEMA6C-209ENST00000613223 C1orf141Q5JVX7 400 aa22.56■■□□□ 1.2
SEMA6C-209ENST00000613223 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
SEMA6C-209ENST00000613223 CPDO75976 1380 aa22.55■■□□□ 1.2
SEMA6C-209ENST00000613223 CABLES1Q8TDN4 633 aa22.54■■□□□ 1.2
SEMA6C-209ENST00000613223 C1orf115Q9H7X2 142 aa22.54■■□□□ 1.2
SEMA6C-209ENST00000613223 CACNA1FO60840 1977 aa22.54■■□□□ 1.2
SEMA6C-209ENST00000613223 SLAIN2Q9P270 581 aa22.54■■□□□ 1.2
SEMA6C-209ENST00000613223 TEFQ10587 303 aa22.52■■□□□ 1.2
SEMA6C-209ENST00000613223 G2E3Q7L622 706 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms