RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SIL1Q9H173 461 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 AACSQ86V21 672 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 KIF1BPQ96EK5 621 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 PUS7Q96PZ0 661 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 KINO60870 393 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 EVA1CP58658 441 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 NFXL1Q6ZNB6 911 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 DENND4BO75064 1496 aaPredicted RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 BAG4O95429 457 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 BLOC1S2Q6QNY1 142 aa14.84□□□□□ -0.03
CDH1-212ENST00000611625 CCAR2Q8N163 923 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 NAT10Q9H0A0 1025 aaKnown RBP14.84□□□□□ -0.03
CDH1-212ENST00000611625 SPC24Q8NBT2 197 aa14.83□□□□□ -0.03
CDH1-212ENST00000611625 SMC5Q8IY18 1101 aa14.83□□□□□ -0.04
CDH1-212ENST00000611625 STK3Q13188 491 aa14.82□□□□□ -0.04
CDH1-212ENST00000611625 TPM1P09493 284 aa14.82□□□□□ -0.04
CDH1-212ENST00000611625 HOOK1Q9UJC3 728 aaKnown RBP14.82□□□□□ -0.04
CDH1-212ENST00000611625 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
CDH1-212ENST00000611625 PES1O00541 588 aaKnown RBP14.82□□□□□ -0.04
CDH1-212ENST00000611625 RAB11FIP3O75154 756 aa14.82□□□□□ -0.04
CDH1-212ENST00000611625 GLRX3O76003 335 aaKnown RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 SNX21Q969T3 373 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 TNMDQ9H2S6 317 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 BTBD11A6QL63 1104 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 LRRFIP2Q9Y608 721 aaKnown RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 ADGBQ8N7X0 1667 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDH1-212ENST00000611625 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 ZNF771Q7L3S4 317 aaPredicted RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 MRPL50Q8N5N7 158 aaKnown RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 ZBTB40Q9NUA8 1239 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 CEBPZQ03701 1054 aaKnown RBP14.81□□□□□ -0.04
CDH1-212ENST00000611625 FLIIQ13045 1269 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 GOLGA6L1Q8N7Z2 621 aa14.81□□□□□ -0.04
CDH1-212ENST00000611625 MAST1Q9Y2H9 1570 aa14.8□□□□□ -0.04
CDH1-212ENST00000611625 TAF7Q15545 349 aaPredicted RBP14.8□□□□□ -0.04
CDH1-212ENST00000611625 SAFBQ15424 915 aaKnown RBP eCLIP14.8□□□□□ -0.04
CDH1-212ENST00000611625 RRP9O43818 475 aaKnown RBP14.8□□□□□ -0.04
CDH1-212ENST00000611625 UQCRHLA0A096LP55 91 aa14.8□□□□□ -0.04
CDH1-212ENST00000611625 UQCRHP07919 91 aa14.8□□□□□ -0.04
CDH1-212ENST00000611625 ATF3P18847 181 aa14.8□□□□□ -0.04
CDH1-212ENST00000611625 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
CDH1-212ENST00000611625 ZNF396Q96N95 335 aaPredicted RBP14.79□□□□□ -0.04
CDH1-212ENST00000611625 TTC21BQ7Z4L5 1316 aa14.79□□□□□ -0.04
CDH1-212ENST00000611625 TATP17735 454 aaPredicted RBP14.79□□□□□ -0.04
CDH1-212ENST00000611625 TSR1Q2NL82 804 aaKnown RBP14.79□□□□□ -0.04
CDH1-212ENST00000611625 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 KDM5CP41229 1560 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 SDSP20132 328 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 NUP62CLQ9H1M0 184 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 MEIS3Q99687 375 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 MYL6BP14649 208 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 SPATA32Q96LK8 384 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 PANK2Q9BZ23 570 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 ZNF518AQ6AHZ1 1483 aa14.78□□□□□ -0.04
CDH1-212ENST00000611625 ERICH2A1L162 156 aa14.77□□□□□ -0.04
CDH1-212ENST00000611625 VAMP4O75379 141 aa14.77□□□□□ -0.04
CDH1-212ENST00000611625 STK38Q15208 465 aa14.77□□□□□ -0.04
CDH1-212ENST00000611625 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.05
CDH1-212ENST00000611625 A0A1W2PP64 1363 aa14.77□□□□□ -0.05
CDH1-212ENST00000611625 PDIA4P13667 645 aaKnown RBP14.77□□□□□ -0.05
CDH1-212ENST00000611625 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
CDH1-212ENST00000611625 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
CDH1-212ENST00000611625 ASXL2Q76L83 1435 aa14.77□□□□□ -0.05
CDH1-212ENST00000611625 DHX16O60231 1041 aaKnown RBP14.76□□□□□ -0.05
CDH1-212ENST00000611625 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
CDH1-212ENST00000611625 KRT32Q14532 448 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 TSHZ3Q63HK5 1081 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 MNS1Q8NEH6 495 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 CCDC183Q5T5S1 534 aa14.76□□□□□ -0.05
CDH1-212ENST00000611625 SYTL4Q96C24 671 aaPredicted RBP14.76□□□□□ -0.05
CDH1-212ENST00000611625 TNNT3P45378 269 aaPredicted RBP14.75□□□□□ -0.05
CDH1-212ENST00000611625 OLFM4Q6UX06 510 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 ANKRD20A12PQ8NF67 263 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 DNAAF4Q8WXU2 420 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 SMC2O95347 1197 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 ME1P48163 572 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 LIMCH1Q9UPQ0 1083 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
CDH1-212ENST00000611625 ABCC10Q5T3U5 1492 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 SH2B1Q9NRF2 756 aaPredicted RBP14.74□□□□□ -0.05
CDH1-212ENST00000611625 GPS2Q13227 327 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 GDPD2Q9HCC8 539 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 ABCC2Q92887 1545 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 ARGLU1Q9NWB6 273 aaPredicted RBP14.74□□□□□ -0.05
CDH1-212ENST00000611625 ACEP12821 1306 aa14.74□□□□□ -0.05
CDH1-212ENST00000611625 PROSER2Q86WR7 435 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms