RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 BTAF1O14981 1849 aa22.2■■□□□ 1.14
HDDC2-210ENST00000609574 GIGYF1O75420 1035 aaPredicted RBP22.19■■□□□ 1.14
HDDC2-210ENST00000609574 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
HDDC2-210ENST00000609574 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
HDDC2-210ENST00000609574 LTN1O94822 1766 aa22.19■■□□□ 1.14
HDDC2-210ENST00000609574 USP47Q96K76 1375 aa22.18■■□□□ 1.14
HDDC2-210ENST00000609574 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
HDDC2-210ENST00000609574 KCNQ4P56696 695 aa22.18■■□□□ 1.14
HDDC2-210ENST00000609574 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
HDDC2-210ENST00000609574 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
HDDC2-210ENST00000609574 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
HDDC2-210ENST00000609574 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
HDDC2-210ENST00000609574 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
HDDC2-210ENST00000609574 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
HDDC2-210ENST00000609574 CHD4Q14839 1912 aa22.14■■□□□ 1.13
HDDC2-210ENST00000609574 FBLN1P23142 703 aa22.12■■□□□ 1.13
HDDC2-210ENST00000609574 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
HDDC2-210ENST00000609574 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
HDDC2-210ENST00000609574 NLGN2Q8NFZ4 835 aa22.11■■□□□ 1.13
HDDC2-210ENST00000609574 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
HDDC2-210ENST00000609574 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
HDDC2-210ENST00000609574 TMF1P82094 1093 aa22.1■■□□□ 1.13
HDDC2-210ENST00000609574 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
HDDC2-210ENST00000609574 TESK2Q96S53 571 aa22.1■■□□□ 1.13
HDDC2-210ENST00000609574 FAM208AQ9UK61 1670 aaKnown RBP22.1■■□□□ 1.13
HDDC2-210ENST00000609574 CDCA8Q53HL2 280 aa22.08■■□□□ 1.13
HDDC2-210ENST00000609574 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
HDDC2-210ENST00000609574 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
HDDC2-210ENST00000609574 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
HDDC2-210ENST00000609574 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
HDDC2-210ENST00000609574 FYB1O15117 783 aa22.07■■□□□ 1.12
HDDC2-210ENST00000609574 MSL1Q68DK7 614 aa22.07■■□□□ 1.12
HDDC2-210ENST00000609574 NSD2O96028 1365 aa22.07■■□□□ 1.12
HDDC2-210ENST00000609574 MPRIPQ6WCQ1 1025 aa22.06■■□□□ 1.12
HDDC2-210ENST00000609574 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
HDDC2-210ENST00000609574 CD2APQ9Y5K6 639 aa22.06■■□□□ 1.12
HDDC2-210ENST00000609574 MEGF6O75095 1541 aa22.05■■□□□ 1.12
HDDC2-210ENST00000609574 AK7Q96M32 723 aa22.04■■□□□ 1.12
HDDC2-210ENST00000609574 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
HDDC2-210ENST00000609574 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.123e-9■□□□□ 9
HDDC2-210ENST00000609574 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
HDDC2-210ENST00000609574 INSRP06213 1382 aa22.01■■□□□ 1.11
HDDC2-210ENST00000609574 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
HDDC2-210ENST00000609574 DOT1LQ8TEK3 1739 aa22■■□□□ 1.11
HDDC2-210ENST00000609574 FLT4P35916 1363 aa21.99■■□□□ 1.11
HDDC2-210ENST00000609574 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
HDDC2-210ENST00000609574 GPBP1L1Q9HC44 474 aaPredicted RBP21.99■■□□□ 1.11
HDDC2-210ENST00000609574 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
HDDC2-210ENST00000609574 PPM1GO15355 546 aaPredicted RBP21.98■■□□□ 1.11
HDDC2-210ENST00000609574 LY75O60449 1722 aa21.97■■□□□ 1.11
HDDC2-210ENST00000609574 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
HDDC2-210ENST00000609574 CYP27B1O15528 508 aa21.95■■□□□ 1.1
HDDC2-210ENST00000609574 PHF14O94880 888 aa21.95■■□□□ 1.1
HDDC2-210ENST00000609574 COL24A1Q17RW2 1714 aa21.94■■□□□ 1.1
HDDC2-210ENST00000609574 GOLGB1Q14789 3259 aaKnown RBP21.93■■□□□ 1.1
HDDC2-210ENST00000609574 PIGBQ92521 554 aa21.93■■□□□ 1.1
HDDC2-210ENST00000609574 TMOD3Q9NYL9 352 aa21.93■■□□□ 1.1
HDDC2-210ENST00000609574 ATP10DQ9P241 1426 aa21.92■■□□□ 1.1
HDDC2-210ENST00000609574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
HDDC2-210ENST00000609574 SSFA2P28290 1259 aa21.92■■□□□ 1.1
HDDC2-210ENST00000609574 RGPD2P0DJD1 1756 aa21.91■■□□□ 1.1
HDDC2-210ENST00000609574 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
HDDC2-210ENST00000609574 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
HDDC2-210ENST00000609574 SIK1P57059 783 aa21.9■■□□□ 1.1
HDDC2-210ENST00000609574 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
HDDC2-210ENST00000609574 ZNF526Q8TF50 670 aaPredicted RBP21.9■■□□□ 1.1
HDDC2-210ENST00000609574 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
HDDC2-210ENST00000609574 IGSF1Q8N6C5 1336 aa21.89■■□□□ 1.1
HDDC2-210ENST00000609574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
HDDC2-210ENST00000609574 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
HDDC2-210ENST00000609574 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
HDDC2-210ENST00000609574 SHANK3Q9BYB0 1731 aa21.88■■□□□ 1.09
HDDC2-210ENST00000609574 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
HDDC2-210ENST00000609574 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
HDDC2-210ENST00000609574 C5P01031 1676 aa21.86■■□□□ 1.09
HDDC2-210ENST00000609574 GNPATO15228 680 aa21.86■■□□□ 1.09
HDDC2-210ENST00000609574 CARD14Q9BXL6 1004 aa21.85■■□□□ 1.09
HDDC2-210ENST00000609574 WWC3Q9ULE0 1092 aa21.85■■□□□ 1.09
HDDC2-210ENST00000609574 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
HDDC2-210ENST00000609574 EYA1Q99502 592 aa21.84■■□□□ 1.09
HDDC2-210ENST00000609574 HSPA6P17066 643 aa21.83■■□□□ 1.09
HDDC2-210ENST00000609574 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.09
HDDC2-210ENST00000609574 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.09
HDDC2-210ENST00000609574 PHKG2P15735 406 aa21.82■■□□□ 1.08
HDDC2-210ENST00000609574 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
HDDC2-210ENST00000609574 NLGN1Q8N2Q7 840 aa21.82■■□□□ 1.08
HDDC2-210ENST00000609574 RTCBQ9Y3I0 505 aaKnown RBP21.82■■□□□ 1.08
HDDC2-210ENST00000609574 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
HDDC2-210ENST00000609574 AMIGO3Q86WK7 504 aa21.81■■□□□ 1.08
HDDC2-210ENST00000609574 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
HDDC2-210ENST00000609574 MMP10P09238 476 aa21.8■■□□□ 1.08
HDDC2-210ENST00000609574 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
HDDC2-210ENST00000609574 TGFB2P61812 414 aa21.79■■□□□ 1.08
HDDC2-210ENST00000609574 ITPK1Q13572 414 aa21.78■■□□□ 1.08
HDDC2-210ENST00000609574 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
HDDC2-210ENST00000609574 ATG3Q9NT62 314 aa21.78■■□□□ 1.08
HDDC2-210ENST00000609574 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
HDDC2-210ENST00000609574 ADCY9O60503 1353 aa21.77■■□□□ 1.08
HDDC2-210ENST00000609574 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
HDDC2-210ENST00000609574 CCDC87Q9NVE4 849 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms