RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 NOL7Q9UMY1 257 aaKnown RBP27.47■■□□□ 1.99
SHANK2-220ENST00000608988 KIAA0232Q92628 1395 aa27.45■■□□□ 1.99
SHANK2-220ENST00000608988 CAVIN1Q6NZI2 390 aaKnown RBP27.45■■□□□ 1.99
SHANK2-220ENST00000608988 PTPRCP08575 1304 aa27.45■■□□□ 1.98
SHANK2-220ENST00000608988 NRKQ7Z2Y5 1582 aa27.44■■□□□ 1.98
SHANK2-220ENST00000608988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.44■■□□□ 1.988e-7■■■□□ 15.6
SHANK2-220ENST00000608988 RGS12O14924 1447 aa27.43■■□□□ 1.98
SHANK2-220ENST00000608988 MCM2P49736 904 aa27.43■■□□□ 1.98
SHANK2-220ENST00000608988 CEP85Q6P2H3 762 aa27.42■■□□□ 1.98
SHANK2-220ENST00000608988 SDSP20132 328 aa27.42■■□□□ 1.98
SHANK2-220ENST00000608988 MAP7D2Q96T17 732 aa27.42■■□□□ 1.98
SHANK2-220ENST00000608988 ELL2O00472 640 aaPredicted RBP27.41■■□□□ 1.98
SHANK2-220ENST00000608988 MBD3O95983 291 aa27.41■■□□□ 1.98
SHANK2-220ENST00000608988 MON2Q7Z3U7 1717 aa27.41■■□□□ 1.98
SHANK2-220ENST00000608988 ERC2O15083 957 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 CSPP1Q1MSJ5 1256 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 OSBPL3Q9H4L5 887 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 RTL1A6NKG5 1358 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 SETD1AO15047 1707 aaKnown RBP27.4■■□□□ 1.98
SHANK2-220ENST00000608988 RBSNQ9H1K0 784 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 DIP2BQ9P265 1576 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
SHANK2-220ENST00000608988 NCLP19338 710 aaKnown RBP27.39■■□□□ 1.98
SHANK2-220ENST00000608988 LRSAM1Q6UWE0 723 aa27.39■■□□□ 1.98
SHANK2-220ENST00000608988 HMMRO75330 724 aa27.38■■□□□ 1.97
SHANK2-220ENST00000608988 AK9Q5TCS8 1911 aa27.37■■□□□ 1.97
SHANK2-220ENST00000608988 VSIG10Q8N0Z9 540 aa27.36■■□□□ 1.97
SHANK2-220ENST00000608988 PRPF40AO75400 957 aaKnown RBP27.36■■□□□ 1.97
SHANK2-220ENST00000608988 C16orf71Q8IYS4 520 aaPredicted RBP27.36■■□□□ 1.97
SHANK2-220ENST00000608988 GPT2Q8TD30 523 aa27.35■■□□□ 1.97
SHANK2-220ENST00000608988 CCDC39Q9UFE4 941 aa27.35■■□□□ 1.97
SHANK2-220ENST00000608988 RAPGEF3O95398 923 aa27.34■■□□□ 1.97
SHANK2-220ENST00000608988 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
SHANK2-220ENST00000608988 COG3Q96JB2 828 aa27.34■■□□□ 1.97
SHANK2-220ENST00000608988 ZKSCAN5Q9Y2L8 839 aa27.34■■□□□ 1.97
SHANK2-220ENST00000608988 ZDHHC9Q9Y397 364 aa27.34■■□□□ 1.97
SHANK2-220ENST00000608988 CHL1O00533 1208 aa27.34■■□□□ 1.97
SHANK2-220ENST00000608988 AKAP12Q02952 1782 aa27.33■■□□□ 1.97
SHANK2-220ENST00000608988 C3P01024 1663 aa27.32■■□□□ 1.96
SHANK2-220ENST00000608988 PKNOX2Q96KN3 472 aa27.32■■□□□ 1.96
SHANK2-220ENST00000608988 MSH6P52701 1360 aa27.32■■□□□ 1.96
SHANK2-220ENST00000608988 PKP1Q13835 747 aa27.32■■□□□ 1.96
SHANK2-220ENST00000608988 DNAJC5Q9H3Z4 198 aa27.32■■□□□ 1.96
SHANK2-220ENST00000608988 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
SHANK2-220ENST00000608988 FBLN1P23142 703 aa27.31■■□□□ 1.96
SHANK2-220ENST00000608988 ANAPC15P60006 121 aa27.31■■□□□ 1.96
SHANK2-220ENST00000608988 ZGPATQ8N5A5 531 aaKnown RBP27.31■■□□□ 1.96
SHANK2-220ENST00000608988 IL17RAQ96F46 866 aa27.31■■□□□ 1.96
SHANK2-220ENST00000608988 INTS4Q96HW7 963 aaKnown RBP27.31■■□□□ 1.96
SHANK2-220ENST00000608988 MTERF4Q7Z6M4 381 aaKnown RBP27.3■■□□□ 1.96
SHANK2-220ENST00000608988 NME9Q86XW9 330 aa27.3■■□□□ 1.96
SHANK2-220ENST00000608988 SSH2Q76I76 1423 aa27.3■■□□□ 1.96
SHANK2-220ENST00000608988 MCCP23508 829 aa27.3■■□□□ 1.96
SHANK2-220ENST00000608988 CUL4AQ13619 759 aa27.3■■□□□ 1.96
SHANK2-220ENST00000608988 OTUD7AQ8TE49 926 aaPredicted RBP27.3■■□□□ 1.96
SHANK2-220ENST00000608988 SYAP1Q96A49 352 aaPredicted RBP27.3■■□□□ 1.96
SHANK2-220ENST00000608988 ZMYND15Q9H091 742 aa27.3■■□□□ 1.96
SHANK2-220ENST00000608988 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
SHANK2-220ENST00000608988 EPB41L2O43491 1005 aaKnown RBP27.28■■□□□ 1.96
SHANK2-220ENST00000608988 SIRT1Q96EB6 747 aa27.28■■□□□ 1.96
SHANK2-220ENST00000608988 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.28■■□□□ 1.96
SHANK2-220ENST00000608988 PPP6R1Q9UPN7 881 aa27.28■■□□□ 1.96
SHANK2-220ENST00000608988 KIF13AQ9H1H9 1805 aa27.28■■□□□ 1.96
SHANK2-220ENST00000608988 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
SHANK2-220ENST00000608988 BRD1O95696 1058 aa27.27■■□□□ 1.96
SHANK2-220ENST00000608988 A2ML1A8K2U0 1454 aa27.26■■□□□ 1.95
SHANK2-220ENST00000608988 CCT4P50991 539 aaKnown RBP27.26■■□□□ 1.95
SHANK2-220ENST00000608988 TMEM63CQ9P1W3 806 aa27.26■■□□□ 1.95
SHANK2-220ENST00000608988 CPS1P31327 1500 aa27.26■■□□□ 1.95
SHANK2-220ENST00000608988 PDE1AP54750 535 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 KLHL34Q8N239 644 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 TUBGCP6Q96RT7 1819 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 PHF14O94880 888 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 TMX3Q96JJ7 454 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 ARHGEF10O15013 1369 aa27.25■■□□□ 1.95
SHANK2-220ENST00000608988 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
SHANK2-220ENST00000608988 MEIS3Q99687 375 aa27.24■■□□□ 1.95
SHANK2-220ENST00000608988 RBM27Q9P2N5 1060 aaKnown RBP27.24■■□□□ 1.95
SHANK2-220ENST00000608988 DYNC1I1O14576 645 aa27.23■■□□□ 1.95
SHANK2-220ENST00000608988 SMARCA5O60264 1052 aaPredicted RBP27.23■■□□□ 1.95
SHANK2-220ENST00000608988 R3HCC1Q9Y3T6 440 aaKnown RBP27.23■■□□□ 1.95
SHANK2-220ENST00000608988 SPATA31D1Q6ZQQ2 1576 aa27.22■■□□□ 1.95
SHANK2-220ENST00000608988 DCTN1Q14203 1278 aa27.22■■□□□ 1.95
SHANK2-220ENST00000608988 SYCE3A1L190 88 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 NEK4P51957 841 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 ESYT1Q9BSJ8 1104 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 TSPY26PQ9H489 355 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 CCDC61Q9Y6R9 512 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 RGPD1P0DJD0 1748 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 TECPR2O15040 1411 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 SALL3Q9BXA9 1300 aa27.21■■□□□ 1.95
SHANK2-220ENST00000608988 NUDT16Q96DE0 195 aaKnown RBP27.2■■□□□ 1.94
SHANK2-220ENST00000608988 CRB1P82279 1406 aa27.2■■□□□ 1.94
SHANK2-220ENST00000608988 FAM184AQ8NB25 1140 aa27.19■■□□□ 1.94
SHANK2-220ENST00000608988 UVSSAQ2YD98 709 aa27.19■■□□□ 1.94
SHANK2-220ENST00000608988 SASS6Q6UVJ0 657 aa27.19■■□□□ 1.94
SHANK2-220ENST00000608988 SRCIN1Q9C0H9 1055 aa27.19■■□□□ 1.94
SHANK2-220ENST00000608988 AOX1Q06278 1338 aa27.18■■□□□ 1.94
SHANK2-220ENST00000608988 AGLP35573 1532 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms