RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 TESK2Q96S53 571 aa26.04■■□□□ 1.76
NECAB3-220ENST00000606699 TONSLQ96HA7 1378 aa26.04■■□□□ 1.76
NECAB3-220ENST00000606699 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
NECAB3-220ENST00000606699 CGNL1Q0VF96 1302 aa26.01■■□□□ 1.75
NECAB3-220ENST00000606699 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
NECAB3-220ENST00000606699 C1QTNF8P60827 252 aa26■■□□□ 1.75
NECAB3-220ENST00000606699 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
NECAB3-220ENST00000606699 RTL1A6NKG5 1358 aa25.98■■□□□ 1.75
NECAB3-220ENST00000606699 NSD2O96028 1365 aa25.98■■□□□ 1.75
NECAB3-220ENST00000606699 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
NECAB3-220ENST00000606699 KCNQ4P56696 695 aa25.97■■□□□ 1.75
NECAB3-220ENST00000606699 KLHL34Q8N239 644 aa25.97■■□□□ 1.75
NECAB3-220ENST00000606699 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
NECAB3-220ENST00000606699 FBLN1P23142 703 aa25.96■■□□□ 1.75
NECAB3-220ENST00000606699 USP47Q96K76 1375 aa25.95■■□□□ 1.74
NECAB3-220ENST00000606699 NBPF6Q5VWK0 638 aa25.94■■□□□ 1.74
NECAB3-220ENST00000606699 NBPF4Q96M43 638 aa25.94■■□□□ 1.74
NECAB3-220ENST00000606699 MEGF6O75095 1541 aa25.93■■□□□ 1.74
NECAB3-220ENST00000606699 SENP3-EIF4A1A0A087X0R7 540 aa25.93■■□□□ 1.74
NECAB3-220ENST00000606699 RAPGEF4Q8WZA2 1011 aa25.93■■□□□ 1.74
NECAB3-220ENST00000606699 GOLGB1Q14789 3259 aaKnown RBP25.92■■□□□ 1.74
NECAB3-220ENST00000606699 LY75O60449 1722 aa25.92■■□□□ 1.74
NECAB3-220ENST00000606699 FYB1O15117 783 aa25.92■■□□□ 1.74
NECAB3-220ENST00000606699 GRIN3BO60391 1043 aa25.92■■□□□ 1.74
NECAB3-220ENST00000606699 RRS1Q15050 365 aaKnown RBP25.91■■□□□ 1.74
NECAB3-220ENST00000606699 PELP1Q8IZL8 1130 aaKnown RBP25.91■■□□□ 1.74
NECAB3-220ENST00000606699 NLGN2Q8NFZ4 835 aa25.91■■□□□ 1.74
NECAB3-220ENST00000606699 SMG6Q86US8 1419 aaKnown RBP25.9■■□□□ 1.74
NECAB3-220ENST00000606699 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
NECAB3-220ENST00000606699 DOT1LQ8TEK3 1739 aa25.9■■□□□ 1.74
NECAB3-220ENST00000606699 MSH5O43196 834 aa25.89■■□□□ 1.74
NECAB3-220ENST00000606699 TATP17735 454 aaPredicted RBP25.89■■□□□ 1.74
NECAB3-220ENST00000606699 GIGYF1O75420 1035 aaPredicted RBP25.88■■□□□ 1.73
NECAB3-220ENST00000606699 FLAD1Q8NFF5 587 aa25.88■■□□□ 1.73
NECAB3-220ENST00000606699 TMF1P82094 1093 aa25.87■■□□□ 1.73
NECAB3-220ENST00000606699 GGNBP2Q9H3C7 697 aa25.87■■□□□ 1.73
NECAB3-220ENST00000606699 SHANK3Q9BYB0 1731 aa25.87■■□□□ 1.73
NECAB3-220ENST00000606699 TUBGCP6Q96RT7 1819 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 INSRP06213 1382 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 KIF24Q5T7B8 1368 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 USHBP1Q8N6Y0 703 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 PCDH11XQ9BZA7 1347 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 PCDH11YQ9BZA8 1340 aa25.86■■□□□ 1.73
NECAB3-220ENST00000606699 RGPD2P0DJD1 1756 aa25.84■■□□□ 1.73
NECAB3-220ENST00000606699 CD2APQ9Y5K6 639 aa25.83■■□□□ 1.73
NECAB3-220ENST00000606699 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
NECAB3-220ENST00000606699 CDCA8Q53HL2 280 aa25.82■■□□□ 1.72
NECAB3-220ENST00000606699 HSP90AB2PQ58FF8 381 aa25.82■■□□□ 1.72
NECAB3-220ENST00000606699 FLT4P35916 1363 aa25.82■■□□□ 1.72
NECAB3-220ENST00000606699 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
NECAB3-220ENST00000606699 SMARCC1Q92922 1105 aaPredicted RBP25.81■■□□□ 1.72
NECAB3-220ENST00000606699 PALLDQ8WX93 1383 aa25.8■■□□□ 1.72
NECAB3-220ENST00000606699 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
NECAB3-220ENST00000606699 MPRIPQ6WCQ1 1025 aa25.79■■□□□ 1.72
NECAB3-220ENST00000606699 CYP27B1O15528 508 aa25.78■■□□□ 1.72
NECAB3-220ENST00000606699 CLSPNQ9HAW4 1339 aa25.78■■□□□ 1.72
NECAB3-220ENST00000606699 C5P01031 1676 aa25.74■■□□□ 1.71
NECAB3-220ENST00000606699 NKX1-1Q15270 411 aaPredicted RBP25.74■■□□□ 1.71
NECAB3-220ENST00000606699 AK7Q96M32 723 aa25.73■■□□□ 1.71
NECAB3-220ENST00000606699 NSD3Q9BZ95 1437 aa25.72■■□□□ 1.71
NECAB3-220ENST00000606699 PIGBQ92521 554 aa25.71■■□□□ 1.71
NECAB3-220ENST00000606699 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
NECAB3-220ENST00000606699 CARD14Q9BXL6 1004 aa25.7■■□□□ 1.7
NECAB3-220ENST00000606699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.7■■□□□ 1.7
NECAB3-220ENST00000606699 EMILIN1Q9Y6C2 1016 aa25.69■■□□□ 1.7
NECAB3-220ENST00000606699 NCAPD2Q15021 1401 aa25.69■■□□□ 1.7
NECAB3-220ENST00000606699 SSFA2P28290 1259 aa25.68■■□□□ 1.7
NECAB3-220ENST00000606699 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
NECAB3-220ENST00000606699 ATP10DQ9P241 1426 aa25.67■■□□□ 1.7
NECAB3-220ENST00000606699 WASHC2AQ641Q2 1341 aa25.66■■□□□ 1.7
NECAB3-220ENST00000606699 C4BP0C0L5 1744 aa25.66■■□□□ 1.7
NECAB3-220ENST00000606699 KIF20BQ96Q89 1820 aa25.66■■□□□ 1.7
NECAB3-220ENST00000606699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.66■■□□□ 1.7
NECAB3-220ENST00000606699 LOC102724428A0A0B4J2F2 783 aa25.66■■□□□ 1.7
NECAB3-220ENST00000606699 SIK1P57059 783 aa25.66■■□□□ 1.7
NECAB3-220ENST00000606699 CEP350Q5VT06 3117 aa25.65■■□□□ 1.7
NECAB3-220ENST00000606699 AMIGO3Q86WK7 504 aa25.65■■□□□ 1.7
NECAB3-220ENST00000606699 GPBP1L1Q9HC44 474 aaPredicted RBP25.65■■□□□ 1.7
NECAB3-220ENST00000606699 PPM1GO15355 546 aaPredicted RBP25.64■■□□□ 1.7
NECAB3-220ENST00000606699 PKD1L3Q7Z443 1732 aa25.63■■□□□ 1.69
NECAB3-220ENST00000606699 PHF14O94880 888 aa25.63■■□□□ 1.69
NECAB3-220ENST00000606699 TMOD3Q9NYL9 352 aa25.63■■□□□ 1.69
NECAB3-220ENST00000606699 ADCY9O60503 1353 aa25.62■■□□□ 1.69
NECAB3-220ENST00000606699 EYA1Q99502 592 aa25.62■■□□□ 1.69
NECAB3-220ENST00000606699 ITGB4P16144 1822 aa25.62■■□□□ 1.69
NECAB3-220ENST00000606699 TOGARAM1Q9Y4F4 1720 aa25.61■■□□□ 1.69
NECAB3-220ENST00000606699 IFNL2Q8IZJ0 200 aa25.61■■□□□ 1.69
NECAB3-220ENST00000606699 LINC00116Q8NCU8 138 aa25.61■■□□□ 1.69
NECAB3-220ENST00000606699 IGSF1Q8N6C5 1336 aa25.61■■□□□ 1.69
NECAB3-220ENST00000606699 ASAP1Q9ULH1 1129 aa25.59■■□□□ 1.69
NECAB3-220ENST00000606699 PLEKHG2Q9H7P9 1386 aa25.58■■□□□ 1.69
NECAB3-220ENST00000606699 UBR3Q6ZT12 1888 aa25.58■■□□□ 1.69
NECAB3-220ENST00000606699 PHKG2P15735 406 aa25.58■■□□□ 1.69
NECAB3-220ENST00000606699 ATP6V1AP38606 617 aa25.58■■□□□ 1.69
NECAB3-220ENST00000606699 SMIM5Q71RC9 77 aa25.58■■□□□ 1.69
NECAB3-220ENST00000606699 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
NECAB3-220ENST00000606699 TIMELESSQ9UNS1 1208 aa25.57■■□□□ 1.68
NECAB3-220ENST00000606699 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
NECAB3-220ENST00000606699 GNPATO15228 680 aa25.56■■□□□ 1.68
NECAB3-220ENST00000606699 IFFO2Q5TF58 517 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms