RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 MEGF6O75095 1541 aa20.95■□□□□ 0.94
LINC00221-201ENST00000603633 SOCS7O14512 581 aa20.95■□□□□ 0.94
LINC00221-201ENST00000603633 AEBP1Q8IUX7 1158 aa20.95■□□□□ 0.94
LINC00221-201ENST00000603633 DDX54Q8TDD1 881 aaKnown RBP20.95■□□□□ 0.94
LINC00221-201ENST00000603633 PCDH11XQ9BZA7 1347 aa20.94■□□□□ 0.94
LINC00221-201ENST00000603633 PCDH11YQ9BZA8 1340 aa20.94■□□□□ 0.94
LINC00221-201ENST00000603633 U2AF1L5P0DN76 240 aaPredicted RBP20.94■□□□□ 0.94
LINC00221-201ENST00000603633 U2AF1Q01081 240 aaKnown RBP eCLIP20.94■□□□□ 0.94
LINC00221-201ENST00000603633 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
LINC00221-201ENST00000603633 HMOX1P09601 288 aa20.93■□□□□ 0.94
LINC00221-201ENST00000603633 BCL9O00512 1426 aa20.92■□□□□ 0.94
LINC00221-201ENST00000603633 FCHSD2O94868 740 aa20.92■□□□□ 0.94
LINC00221-201ENST00000603633 PNNQ9H307 717 aaKnown RBP20.92■□□□□ 0.94
LINC00221-201ENST00000603633 FAM182BQ5T319 152 aa20.91■□□□□ 0.94
LINC00221-201ENST00000603633 PARP4Q9UKK3 1724 aaKnown RBP20.91■□□□□ 0.94
LINC00221-201ENST00000603633 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.94
LINC00221-201ENST00000603633 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.94
LINC00221-201ENST00000603633 UPF1Q92900 1129 aaKnown RBP eCLIP20.89■□□□□ 0.947e-6■■■■□ 24.4
LINC00221-201ENST00000603633 NEFMP07197 916 aa20.88■□□□□ 0.93
LINC00221-201ENST00000603633 HSP90AB1P08238 724 aaKnown RBP20.88■□□□□ 0.93
LINC00221-201ENST00000603633 CYP27B1O15528 508 aa20.87■□□□□ 0.93
LINC00221-201ENST00000603633 WDR43Q15061 677 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC00221-201ENST00000603633 RSPH6AQ9H0K4 717 aa20.87■□□□□ 0.93
LINC00221-201ENST00000603633 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
LINC00221-201ENST00000603633 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
LINC00221-201ENST00000603633 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
LINC00221-201ENST00000603633 PHKG2P15735 406 aa20.86■□□□□ 0.93
LINC00221-201ENST00000603633 PRKAR2BP31323 418 aa20.86■□□□□ 0.93
LINC00221-201ENST00000603633 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
LINC00221-201ENST00000603633 GAS2L2Q8NHY3 880 aa20.85■□□□□ 0.93
LINC00221-201ENST00000603633 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
LINC00221-201ENST00000603633 TRIM37O94972 964 aa20.84■□□□□ 0.93
LINC00221-201ENST00000603633 DIEXFQ68CQ4 756 aaKnown RBP20.84■□□□□ 0.93
LINC00221-201ENST00000603633 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
LINC00221-201ENST00000603633 AKAP4Q5JQC9 854 aa20.83■□□□□ 0.92
LINC00221-201ENST00000603633 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
LINC00221-201ENST00000603633 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
LINC00221-201ENST00000603633 MRS2Q9HD23 443 aa20.81■□□□□ 0.92
LINC00221-201ENST00000603633 BAG6P46379 1132 aa20.8■□□□□ 0.92
LINC00221-201ENST00000603633 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
LINC00221-201ENST00000603633 RGPD2P0DJD1 1756 aa20.8■□□□□ 0.92
LINC00221-201ENST00000603633 WNK3Q9BYP7 1800 aa20.79■□□□□ 0.92
LINC00221-201ENST00000603633 MAPK8IP3Q9UPT6 1336 aa20.79■□□□□ 0.92
LINC00221-201ENST00000603633 APBA3O96018 575 aa20.78■□□□□ 0.92
LINC00221-201ENST00000603633 PRIM1P49642 420 aaKnown RBP20.78■□□□□ 0.92
LINC00221-201ENST00000603633 SYTL4Q96C24 671 aaPredicted RBP20.78■□□□□ 0.92
LINC00221-201ENST00000603633 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
LINC00221-201ENST00000603633 BRWD3Q6RI45 1802 aa20.78■□□□□ 0.92
LINC00221-201ENST00000603633 ERVV-2B6SEH9 535 aa20.77■□□□□ 0.92
LINC00221-201ENST00000603633 PLEKHF1Q96S99 279 aa20.77■□□□□ 0.92
LINC00221-201ENST00000603633 ADAMTS8Q9UP79 889 aa20.77■□□□□ 0.92
LINC00221-201ENST00000603633 KCNQ2O43526 872 aa20.77■□□□□ 0.91
LINC00221-201ENST00000603633 GNAT3A8MTJ3 354 aa20.76■□□□□ 0.91
LINC00221-201ENST00000603633 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
LINC00221-201ENST00000603633 PLSCR1O15162 318 aa20.74■□□□□ 0.91
LINC00221-201ENST00000603633 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
LINC00221-201ENST00000603633 RUNDC1Q96C34 613 aa20.74■□□□□ 0.91
LINC00221-201ENST00000603633 EP400Q96L91 3159 aa20.74■□□□□ 0.91
LINC00221-201ENST00000603633 CCER2I3L3R5 266 aa20.73■□□□□ 0.91
LINC00221-201ENST00000603633 HTATSF1O43719 755 aaKnown RBP20.73■□□□□ 0.91
LINC00221-201ENST00000603633 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
LINC00221-201ENST00000603633 TMOD3Q9NYL9 352 aa20.73■□□□□ 0.91
LINC00221-201ENST00000603633 PKD1L3Q7Z443 1732 aa20.73■□□□□ 0.91
LINC00221-201ENST00000603633 CABP4P57796 275 aa20.73■□□□□ 0.91
LINC00221-201ENST00000603633 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
LINC00221-201ENST00000603633 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
LINC00221-201ENST00000603633 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
LINC00221-201ENST00000603633 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
LINC00221-201ENST00000603633 PTF1AQ7RTS3 328 aa20.71■□□□□ 0.91
LINC00221-201ENST00000603633 DEFB132Q7Z7B7 95 aa20.71■□□□□ 0.91
LINC00221-201ENST00000603633 EN1Q05925 392 aaPredicted RBP20.7■□□□□ 0.91
LINC00221-201ENST00000603633 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
LINC00221-201ENST00000603633 HMGB2P26583 209 aaKnown RBP20.69■□□□□ 0.9
LINC00221-201ENST00000603633 PIGBQ92521 554 aa20.69■□□□□ 0.9
LINC00221-201ENST00000603633 CAMKK2Q96RR4 588 aa20.69■□□□□ 0.9
LINC00221-201ENST00000603633 KDM6AO15550 1401 aaPredicted RBP20.68■□□□□ 0.9
LINC00221-201ENST00000603633 CCDC146Q8IYE0 955 aa20.68■□□□□ 0.9
LINC00221-201ENST00000603633 LGR6Q9HBX8 967 aa20.68■□□□□ 0.9
LINC00221-201ENST00000603633 LMOD3Q0VAK6 560 aa20.67■□□□□ 0.9
LINC00221-201ENST00000603633 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
LINC00221-201ENST00000603633 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
LINC00221-201ENST00000603633 TMPOP42166 694 aaKnown RBP20.66■□□□□ 0.9
LINC00221-201ENST00000603633 RIPK4P57078 832 aa20.66■□□□□ 0.9
LINC00221-201ENST00000603633 TEFQ10587 303 aa20.66■□□□□ 0.9
LINC00221-201ENST00000603633 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
LINC00221-201ENST00000603633 EZH2Q15910 746 aaKnown RBP20.65■□□□□ 0.9
LINC00221-201ENST00000603633 SHANK3Q9BYB0 1731 aa20.65■□□□□ 0.9
LINC00221-201ENST00000603633 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.9
LINC00221-201ENST00000603633 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
LINC00221-201ENST00000603633 TXNRD1Q16881 649 aa20.64■□□□□ 0.89
LINC00221-201ENST00000603633 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
LINC00221-201ENST00000603633 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
LINC00221-201ENST00000603633 MIER1Q8N108 512 aa20.62■□□□□ 0.89
LINC00221-201ENST00000603633 ATG3Q9NT62 314 aa20.62■□□□□ 0.89
LINC00221-201ENST00000603633 MCM10Q7L590 875 aa20.61■□□□□ 0.89
LINC00221-201ENST00000603633 PALLDQ8WX93 1383 aa20.61■□□□□ 0.89
LINC00221-201ENST00000603633 APAF1O14727 1248 aa20.61■□□□□ 0.89
LINC00221-201ENST00000603633 PROM2Q8N271 834 aa20.61■□□□□ 0.89
LINC00221-201ENST00000603633 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
LINC00221-201ENST00000603633 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms