RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
PPFIA3-206ENST00000602655 ISY1Q9ULR0 285 aaKnown RBP18.96■□□□□ 0.63
PPFIA3-206ENST00000602655 PAXIP1Q6ZW49 1069 aaPredicted RBP18.96■□□□□ 0.63
PPFIA3-206ENST00000602655 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
PPFIA3-206ENST00000602655 DDX49Q9Y6V7 483 aaKnown RBP18.96■□□□□ 0.63
PPFIA3-206ENST00000602655 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
PPFIA3-206ENST00000602655 PTMAP06454 111 aaKnown RBP18.95■□□□□ 0.62
PPFIA3-206ENST00000602655 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
PPFIA3-206ENST00000602655 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
PPFIA3-206ENST00000602655 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
PPFIA3-206ENST00000602655 SLC4A10Q6U841 1118 aa18.94■□□□□ 0.62
PPFIA3-206ENST00000602655 C22orf23Q9BZE7 217 aa18.94■□□□□ 0.62
PPFIA3-206ENST00000602655 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
PPFIA3-206ENST00000602655 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
PPFIA3-206ENST00000602655 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
PPFIA3-206ENST00000602655 NSD2O96028 1365 aa18.93■□□□□ 0.62
PPFIA3-206ENST00000602655 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
PPFIA3-206ENST00000602655 C8orf58Q8NAV2 365 aa18.92■□□□□ 0.62
PPFIA3-206ENST00000602655 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
PPFIA3-206ENST00000602655 ZNF335Q9H4Z2 1342 aaPredicted RBP18.92■□□□□ 0.62
PPFIA3-206ENST00000602655 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
PPFIA3-206ENST00000602655 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
PPFIA3-206ENST00000602655 DMTNQ08495 405 aa18.91■□□□□ 0.62
PPFIA3-206ENST00000602655 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
PPFIA3-206ENST00000602655 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
PPFIA3-206ENST00000602655 TSC1Q92574 1164 aa18.9■□□□□ 0.62
PPFIA3-206ENST00000602655 C3P01024 1663 aa18.9■□□□□ 0.62
PPFIA3-206ENST00000602655 MPNDQ8N594 471 aa18.9■□□□□ 0.62
PPFIA3-206ENST00000602655 REREQ9P2R6 1566 aa18.89■□□□□ 0.62
PPFIA3-206ENST00000602655 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 CGNQ9P2M7 1197 aaKnown RBP18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 ATP7BP35670 1465 aa18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 DYNC1I1O14576 645 aa18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 TSPYL4Q9UJ04 414 aa18.89■□□□□ 0.61
PPFIA3-206ENST00000602655 TWISTNBQ3B726 338 aaPredicted RBP18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 MPRIPQ6WCQ1 1025 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 STRN4Q9NRL3 753 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 NKTRP30414 1462 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 NEURL4Q96JN8 1562 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 GCP02774 474 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 CCDC94Q9BW85 323 aaPredicted RBP18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 USP6P35125 1406 aa18.88■□□□□ 0.61
PPFIA3-206ENST00000602655 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 HOXC9P31274 260 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 C19orf44Q9H6X5 657 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 NPHP4O75161 1426 aaPredicted RBP18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 FAM135BQ49AJ0 1406 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 ANXA1P04083 346 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 DZIP1LQ8IYY4 767 aaKnown RBP18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
PPFIA3-206ENST00000602655 FAM177BA6PVY3 158 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 CPSF1Q10570 1443 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 TRIM27P14373 513 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 ZNF771Q7L3S4 317 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
PPFIA3-206ENST00000602655 TMEM57Q8N5G2 664 aa18.85■□□□□ 0.61
PPFIA3-206ENST00000602655 JARID2Q92833 1246 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-206ENST00000602655 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
PPFIA3-206ENST00000602655 CSPP1Q1MSJ5 1256 aa18.85■□□□□ 0.61
PPFIA3-206ENST00000602655 TAF7LQ5H9L4 462 aa18.84■□□□□ 0.61
PPFIA3-206ENST00000602655 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
PPFIA3-206ENST00000602655 ZSCAN20P17040 1043 aaPredicted RBP18.84■□□□□ 0.61
PPFIA3-206ENST00000602655 AXIN2Q9Y2T1 843 aa18.84■□□□□ 0.61
PPFIA3-206ENST00000602655 F6X3S4 739 aa18.83■□□□□ 0.61
PPFIA3-206ENST00000602655 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.61
PPFIA3-206ENST00000602655 MYO3AQ8NEV4 1616 aa18.83■□□□□ 0.61
PPFIA3-206ENST00000602655 ZBTB22O15209 634 aa18.83■□□□□ 0.6
PPFIA3-206ENST00000602655 TERF1P54274 439 aa18.83■□□□□ 0.6
PPFIA3-206ENST00000602655 CAVIN1Q6NZI2 390 aaKnown RBP18.83■□□□□ 0.6
PPFIA3-206ENST00000602655 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
PPFIA3-206ENST00000602655 GNAI1P63096 354 aa18.82■□□□□ 0.6
PPFIA3-206ENST00000602655 SASS6Q6UVJ0 657 aa18.82■□□□□ 0.6
PPFIA3-206ENST00000602655 LGR6Q9HBX8 967 aa18.82■□□□□ 0.6
PPFIA3-206ENST00000602655 UTP14CQ5TAP6 766 aaKnown RBP18.81■□□□□ 0.6
PPFIA3-206ENST00000602655 CHMP4AQ9BY43 222 aa18.81■□□□□ 0.6
PPFIA3-206ENST00000602655 CEP170BQ9Y4F5 1589 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-206ENST00000602655 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 RNF214Q8ND24 703 aa18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 ZNF330Q9Y3S2 320 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 PPP1R9BQ96SB3 815 aa18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-206ENST00000602655 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
PPFIA3-206ENST00000602655 IPO4Q8TEX9 1081 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-206ENST00000602655 INSRP06213 1382 aa18.78■□□□□ 0.6
PPFIA3-206ENST00000602655 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
PPFIA3-206ENST00000602655 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
PPFIA3-206ENST00000602655 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
PPFIA3-206ENST00000602655 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
PPFIA3-206ENST00000602655 KCNQ3O43525 872 aa18.77■□□□□ 0.59
PPFIA3-206ENST00000602655 KIF20AO95235 890 aa18.77■□□□□ 0.59
PPFIA3-206ENST00000602655 TEFQ10587 303 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms