RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.44
SYMPK-213ENST00000599460 PSMA5P28066 241 aa17.83■□□□□ 0.44
SYMPK-213ENST00000599460 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
SYMPK-213ENST00000599460 CHMP5Q9NZZ3 219 aa17.83■□□□□ 0.44
SYMPK-213ENST00000599460 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.44
SYMPK-213ENST00000599460 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
SYMPK-213ENST00000599460 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 F6X3S4 739 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 NPATQ14207 1427 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 SAMD9LQ8IVG5 1584 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
SYMPK-213ENST00000599460 CHAF1AQ13111 956 aaPredicted RBP17.82■□□□□ 0.44
SYMPK-213ENST00000599460 GNL3LQ9NVN8 582 aaKnown RBP17.82■□□□□ 0.44
SYMPK-213ENST00000599460 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
SYMPK-213ENST00000599460 MYD88Q99836 296 aa17.81■□□□□ 0.44
SYMPK-213ENST00000599460 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
SYMPK-213ENST00000599460 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
SYMPK-213ENST00000599460 ZCCHC11Q5TAX3 1644 aaKnown RBP17.81■□□□□ 0.44
SYMPK-213ENST00000599460 TTC37Q6PGP7 1564 aa17.81■□□□□ 0.44
SYMPK-213ENST00000599460 FMNL2Q96PY5 1086 aa17.81■□□□□ 0.44
SYMPK-213ENST00000599460 EIF4A2Q14240 407 aaKnown RBP17.8■□□□□ 0.44
SYMPK-213ENST00000599460 SKOR2Q2VWA4 1001 aaPredicted RBP17.8■□□□□ 0.44
SYMPK-213ENST00000599460 FOSBP53539 338 aa17.8■□□□□ 0.44
SYMPK-213ENST00000599460 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
SYMPK-213ENST00000599460 CREBRFQ8IUR6 639 aa17.79■□□□□ 0.44
SYMPK-213ENST00000599460 EXOC6BQ9Y2D4 811 aa17.79■□□□□ 0.44
SYMPK-213ENST00000599460 IL16Q14005 1332 aa17.79■□□□□ 0.44
SYMPK-213ENST00000599460 TRPM2O94759 1503 aa17.79■□□□□ 0.44
SYMPK-213ENST00000599460 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.447e-7■■■■□ 19.8
SYMPK-213ENST00000599460 KIAA2012Q0VF49 1180 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 CTDP1Q9Y5B0 961 aaPredicted RBP17.78■□□□□ 0.44
SYMPK-213ENST00000599460 TRIM27P14373 513 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
SYMPK-213ENST00000599460 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
SYMPK-213ENST00000599460 NEK4P51957 841 aa17.77■□□□□ 0.44
SYMPK-213ENST00000599460 NUCB2P80303 420 aa17.77■□□□□ 0.44
SYMPK-213ENST00000599460 FLIIQ13045 1269 aa17.77■□□□□ 0.44
SYMPK-213ENST00000599460 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.44
SYMPK-213ENST00000599460 TOM1O60784 492 aa17.77■□□□□ 0.43
SYMPK-213ENST00000599460 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.43
SYMPK-213ENST00000599460 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
SYMPK-213ENST00000599460 PTPRCP08575 1304 aa17.76■□□□□ 0.43
SYMPK-213ENST00000599460 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
SYMPK-213ENST00000599460 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
SYMPK-213ENST00000599460 UBAP1LF5GYI3 381 aa17.76■□□□□ 0.43
SYMPK-213ENST00000599460 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
SYMPK-213ENST00000599460 ERCC6L2Q5T890 1561 aa17.75■□□□□ 0.43
SYMPK-213ENST00000599460 FLT4P35916 1363 aa17.75■□□□□ 0.43
SYMPK-213ENST00000599460 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
SYMPK-213ENST00000599460 ZPR1O75312 459 aa17.74■□□□□ 0.43
SYMPK-213ENST00000599460 RABEP1Q15276 862 aa17.74■□□□□ 0.43
SYMPK-213ENST00000599460 LRRC59Q96AG4 307 aaKnown RBP17.74■□□□□ 0.43
SYMPK-213ENST00000599460 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-213ENST00000599460 BACH2Q9BYV9 841 aa17.73■□□□□ 0.43
SYMPK-213ENST00000599460 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
SYMPK-213ENST00000599460 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
SYMPK-213ENST00000599460 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
SYMPK-213ENST00000599460 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
SYMPK-213ENST00000599460 MTMR7Q9Y216 660 aa17.73■□□□□ 0.43
SYMPK-213ENST00000599460 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
SYMPK-213ENST00000599460 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
SYMPK-213ENST00000599460 ZCRB1Q8TBF4 217 aaKnown RBP17.73■□□□□ 0.43
SYMPK-213ENST00000599460 SAFBQ15424 915 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYMPK-213ENST00000599460 RRP12Q5JTH9 1297 aaKnown RBP17.72■□□□□ 0.43
SYMPK-213ENST00000599460 MAP3K2Q9Y2U5 619 aa17.72■□□□□ 0.43
SYMPK-213ENST00000599460 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
SYMPK-213ENST00000599460 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
SYMPK-213ENST00000599460 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
SYMPK-213ENST00000599460 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
SYMPK-213ENST00000599460 GCP02774 474 aa17.72■□□□□ 0.43
SYMPK-213ENST00000599460 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-213ENST00000599460 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-213ENST00000599460 ZBTB3Q9H5J0 574 aa17.71■□□□□ 0.43
SYMPK-213ENST00000599460 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.43
SYMPK-213ENST00000599460 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
SYMPK-213ENST00000599460 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
SYMPK-213ENST00000599460 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
SYMPK-213ENST00000599460 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 KDM4AO75164 1064 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 TEX13AQ9BXU3 409 aaPredicted RBP17.7■□□□□ 0.42
SYMPK-213ENST00000599460 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
SYMPK-213ENST00000599460 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
SYMPK-213ENST00000599460 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
SYMPK-213ENST00000599460 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
SYMPK-213ENST00000599460 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
SYMPK-213ENST00000599460 KDM6BO15054 1643 aa17.69■□□□□ 0.42
SYMPK-213ENST00000599460 MX1P20591 662 aa17.69■□□□□ 0.42
SYMPK-213ENST00000599460 MCM2P49736 904 aa17.69■□□□□ 0.42
SYMPK-213ENST00000599460 A0A087WZG4 1122 aa17.69■□□□□ 0.42
SYMPK-213ENST00000599460 PIK3R4Q99570 1358 aa17.69■□□□□ 0.42
SYMPK-213ENST00000599460 HOXC9P31274 260 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms