RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
GRAMD1A-207ENST00000598118 NGDNQ8NEJ9 315 aaKnown RBP24.51■■□□□ 1.51
GRAMD1A-207ENST00000598118 PIK3C2AO00443 1686 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 DCTPP1Q9H773 170 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 SBNO1A3KN83 1393 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 FLT4P35916 1363 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 TBC1D9Q6ZT07 1266 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 BRPF3Q9ULD4 1205 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 ATP10DQ9P241 1426 aa24.5■■□□□ 1.51
GRAMD1A-207ENST00000598118 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
GRAMD1A-207ENST00000598118 CEP170BQ9Y4F5 1589 aaPredicted RBP24.49■■□□□ 1.51
GRAMD1A-207ENST00000598118 EYA1Q99502 592 aa24.48■■□□□ 1.51
GRAMD1A-207ENST00000598118 KIF2CQ99661 725 aa24.48■■□□□ 1.51
GRAMD1A-207ENST00000598118 KDRP35968 1356 aa24.48■■□□□ 1.51
GRAMD1A-207ENST00000598118 MSH6P52701 1360 aa24.48■■□□□ 1.51
GRAMD1A-207ENST00000598118 PLEKHM2Q8IWE5 1019 aa24.47■■□□□ 1.51
GRAMD1A-207ENST00000598118 HSCBQ8IWL3 235 aa24.47■■□□□ 1.51
GRAMD1A-207ENST00000598118 FER1L4A9Z1Z3 1794 aa24.47■■□□□ 1.51
GRAMD1A-207ENST00000598118 GSPT1P15170 499 aaKnown RBP24.47■■□□□ 1.51
GRAMD1A-207ENST00000598118 ANKRD44Q8N8A2 993 aa24.47■■□□□ 1.51
GRAMD1A-207ENST00000598118 SLC4A2P04920 1241 aa24.46■■□□□ 1.51
GRAMD1A-207ENST00000598118 AMPHP49418 695 aa24.46■■□□□ 1.51
GRAMD1A-207ENST00000598118 PTPRCP08575 1304 aa24.46■■□□□ 1.51
GRAMD1A-207ENST00000598118 C16orf71Q8IYS4 520 aaPredicted RBP24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 CHMP5Q9NZZ3 219 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 IGSF1Q8N6C5 1336 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 XRN1Q8IZH2 1706 aaKnown RBP24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 CEP85Q6P2H3 762 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 SNX21Q969T3 373 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 MEIS3Q99687 375 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 RTL1A6NKG5 1358 aa24.45■■□□□ 1.5
GRAMD1A-207ENST00000598118 THEMISQ8N1K5 641 aaPredicted RBP24.44■■□□□ 1.5
GRAMD1A-207ENST00000598118 NCOA3Q9Y6Q9 1424 aa24.44■■□□□ 1.5
GRAMD1A-207ENST00000598118 G2E3Q7L622 706 aa24.44■■□□□ 1.5
GRAMD1A-207ENST00000598118 RTF1Q92541 710 aaKnown RBP24.44■■□□□ 1.5
GRAMD1A-207ENST00000598118 TSPYL4Q9UJ04 414 aa24.44■■□□□ 1.5
GRAMD1A-207ENST00000598118 MARF1Q9Y4F3 1742 aaKnown RBP24.43■■□□□ 1.5
GRAMD1A-207ENST00000598118 NLRP6P59044 892 aa24.42■■□□□ 1.5
GRAMD1A-207ENST00000598118 NUTM2GQ5VZR2 741 aa24.42■■□□□ 1.5
GRAMD1A-207ENST00000598118 RPAP2Q8IXW5 612 aaPredicted RBP24.42■■□□□ 1.5
GRAMD1A-207ENST00000598118 KCNA6P17658 529 aa24.42■■□□□ 1.5
GRAMD1A-207ENST00000598118 MCM4P33991 863 aa24.41■■□□□ 1.5
GRAMD1A-207ENST00000598118 OTUD7AQ8TE49 926 aaPredicted RBP24.41■■□□□ 1.5
GRAMD1A-207ENST00000598118 DDIT3P35638 169 aa24.41■■□□□ 1.5
GRAMD1A-207ENST00000598118 CDC45O75419 566 aa24.4■■□□□ 1.5
GRAMD1A-207ENST00000598118 CD2BP2O95400 341 aaKnown RBP24.4■■□□□ 1.5
GRAMD1A-207ENST00000598118 RTN4Q9NQC3 1192 aaKnown RBP24.4■■□□□ 1.5
GRAMD1A-207ENST00000598118 F6X3S4 739 aa24.39■■□□□ 1.5
GRAMD1A-207ENST00000598118 TTC22Q5TAA0 569 aa24.38■■□□□ 1.49
GRAMD1A-207ENST00000598118 GAS2L2Q8NHY3 880 aa24.38■■□□□ 1.49
GRAMD1A-207ENST00000598118 RBM42Q9BTD8 480 aaKnown RBP24.38■■□□□ 1.49
GRAMD1A-207ENST00000598118 SMARCA5O60264 1052 aaPredicted RBP24.38■■□□□ 1.49
GRAMD1A-207ENST00000598118 HOXC9P31274 260 aa24.37■■□□□ 1.49
GRAMD1A-207ENST00000598118 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
GRAMD1A-207ENST00000598118 APBB1O00213 710 aa24.36■■□□□ 1.49
GRAMD1A-207ENST00000598118 SLC4A10Q6U841 1118 aa24.36■■□□□ 1.49
GRAMD1A-207ENST00000598118 ANKARQ7Z5J8 1434 aa24.36■■□□□ 1.49
GRAMD1A-207ENST00000598118 LRRC37A3O60309 1634 aa24.35■■□□□ 1.49
GRAMD1A-207ENST00000598118 HSP90AB1P08238 724 aaKnown RBP24.33■■□□□ 1.49
GRAMD1A-207ENST00000598118 ABTB2Q8N961 1025 aa24.33■■□□□ 1.49
GRAMD1A-207ENST00000598118 GNAT3A8MTJ3 354 aa24.32■■□□□ 1.48
GRAMD1A-207ENST00000598118 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
GRAMD1A-207ENST00000598118 USP54Q70EL1 1684 aa24.31■■□□□ 1.48
GRAMD1A-207ENST00000598118 LTV1Q96GA3 475 aaPredicted RBP24.31■■□□□ 1.48
GRAMD1A-207ENST00000598118 IL17REQ8NFR9 667 aa24.31■■□□□ 1.48
GRAMD1A-207ENST00000598118 SDSP20132 328 aa24.3■■□□□ 1.48
GRAMD1A-207ENST00000598118 CCT4P50991 539 aaKnown RBP24.3■■□□□ 1.48
GRAMD1A-207ENST00000598118 FAM208AQ9UK61 1670 aaKnown RBP24.3■■□□□ 1.48
GRAMD1A-207ENST00000598118 NECTIN2Q92692 538 aa24.3■■□□□ 1.48
GRAMD1A-207ENST00000598118 SETD1BQ9UPS6 1966 aaKnown RBP24.29■■□□□ 1.48
GRAMD1A-207ENST00000598118 K7ELQ4 463 aaPredicted RBP24.28■■□□□ 1.48
GRAMD1A-207ENST00000598118 FOXD4L1Q9NU39 408 aa24.28■■□□□ 1.48
GRAMD1A-207ENST00000598118 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
GRAMD1A-207ENST00000598118 CACNA1FO60840 1977 aa24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 FLIIQ13045 1269 aa24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 USHBP1Q8N6Y0 703 aa24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 TRAK2O60296 914 aa24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 RBM33Q96EV2 1170 aaKnown RBP24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 USP26Q9BXU7 913 aa24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 GZF1Q9H116 711 aaPredicted RBP24.27■■□□□ 1.48
GRAMD1A-207ENST00000598118 MAP3K5Q99683 1374 aa24.26■■□□□ 1.47
GRAMD1A-207ENST00000598118 LTN1O94822 1766 aa24.26■■□□□ 1.47
GRAMD1A-207ENST00000598118 HMMRO75330 724 aa24.26■■□□□ 1.47
GRAMD1A-207ENST00000598118 CCDC30Q5VVM6 783 aa24.25■■□□□ 1.47
GRAMD1A-207ENST00000598118 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
GRAMD1A-207ENST00000598118 CIZ1Q9ULV3 898 aaPredicted RBP24.25■■□□□ 1.47
GRAMD1A-207ENST00000598118 FKBP5Q13451 457 aaPredicted RBP24.24■■□□□ 1.47
GRAMD1A-207ENST00000598118 RAB3GAP1Q15042 981 aa24.24■■□□□ 1.47
GRAMD1A-207ENST00000598118 CHD2O14647 1828 aaKnown RBP24.24■■□□□ 1.47
GRAMD1A-207ENST00000598118 GNAI2P04899 355 aa24.23■■□□□ 1.47
GRAMD1A-207ENST00000598118 HSP90AA1P07900 732 aaKnown RBP24.23■■□□□ 1.47
GRAMD1A-207ENST00000598118 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
GRAMD1A-207ENST00000598118 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
GRAMD1A-207ENST00000598118 EXOC6BQ9Y2D4 811 aa24.23■■□□□ 1.47
GRAMD1A-207ENST00000598118 AK9Q5TCS8 1911 aa24.22■■□□□ 1.47
GRAMD1A-207ENST00000598118 PNMA6EA0A0J9YXQ4 647 aa24.21■■□□□ 1.47
GRAMD1A-207ENST00000598118 DDX11L8A8MPP1 907 aa24.21■■□□□ 1.47
GRAMD1A-207ENST00000598118 PDE1AP54750 535 aa24.21■■□□□ 1.47
GRAMD1A-207ENST00000598118 OSBPL3Q9H4L5 887 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms